30 research outputs found
Modeling Diapause Termination of Rhipicephalus Appendiculatus using Statistical Tools to Detect Sudden Behavioral Changes and Time Dependencies
Alterations in Adenosine Metabolism and Signaling in Patients with Chronic Obstructive Pulmonary Disease and Idiopathic Pulmonary Fibrosis
Background: Adenosine is generated in response to cellular stress and damage and is elevated in the lungs of patients with chronic lung disease. Adenosine signaling through its cell surface receptors serves as an amplifier of chronic lung disorders, suggesting adenosine-based therapeutics may be beneficial in the treatment of lung diseases such as chronic obstructive pulmonary disease (COPD) and idiopathic pulmonary fibrosis (IPF). Previous studies in mouse models of chronic lung disease demonstrate that the key components of adenosine metabolism and signaling are altered. Changes include an upregulation of CD73, the major enzyme of adenosine production and down-regulation of adenosine deaminase (ADA), the major enzyme for adenosine metabolism. In addition, adenosine receptors are elevated. Methodology/Principal Findings: The focus of this study was to utilize tissues from patients with COPD or IPF to examine whether changes in purinergic metabolism and signaling occur in human disease. Results demonstrate that the levels of CD73 and A2BR are elevated in surgical lung biopsies from severe COPD and IPF patients. Immunolocalization assays revealed abundant expression of CD73 and the A2BR in alternatively activated macrophages in both COPD and IPF samples. In addition, mediators that are regulated by the A 2BR, such as IL-6, IL-8 and osteopontin were elevated in these samples and activation of the A 2BR on cells isolated from the airways of COPD and IPF patients was shown to directly induce the production of these mediators. Conclusions/Significance: These findings suggest that components of adenosine metabolism and signaling are altered in
Mitochondrial phylogeography and population structure of the cattle tick Rhipicephalus appendiculatus in the African Great Lakes region
Abstract Background The ixodid tick Rhipicephalus appendiculatus is the main vector of Theileria parva, wich causes the highly fatal cattle disease East Coast fever (ECF) in sub-Saharan Africa. Rhipicephalus appendiculatus populations differ in their ecology, diapause behaviour and vector competence. Thus, their expansion in new areas may change the genetic structure and consequently affect the vector-pathogen system and disease outcomes. In this study we investigated the genetic distribution of R. appendiculatus across agro-ecological zones (AEZs) in the African Great Lakes region to better understand the epidemiology of ECF and elucidate R. appendiculatus evolutionary history and biogeographical colonization in Africa. Methods Sequencing was performed on two mitochondrial genes (cox1 and 12S rRNA) of 218 ticks collected from cattle across six AEZs along an altitudinal gradient in the Democratic Republic of Congo, Rwanda, Burundi and Tanzania. Phylogenetic relationships between tick populations were determined and evolutionary population dynamics models were assessed by mismach distribution. Results Population genetic analysis yielded 22 cox1 and 9 12S haplotypes in a total of 209 and 126 nucleotide sequences, respectively. Phylogenetic algorithms grouped these haplotypes for both genes into two major clades (lineages A and B). We observed significant genetic variation segregating the two lineages and low structure among populations with high degree of migration. The observed high gene flow indicates population admixture between AEZs. However, reduced number of migrants was observed between lowlands and highlands. Mismatch analysis detected a signature of rapid demographic and range expansion of lineage A. The star-like pattern of isolated and published haplotypes indicates that the two lineages evolve independently and have been subjected to expansion across Africa. Conclusions Two sympatric R. appendiculatus lineages occur in the Great Lakes region. Lineage A, the most diverse and ubiquitous, has experienced rapid population growth and range expansion in all AEZs probably through cattle movement, whereas lineage B, the less abundant, has probably established a founder population from recent colonization events and its occurrence decreases with altitude. These two lineages are sympatric in central and eastern Africa and allopatric in southern Africa. The observed colonization pattern may strongly affect the transmission system and may explain ECF endemic instability in the tick distribution fringes
Genetic and antigenic variation of the bovine tick-borne pathogen Theileria parva in the Great Lakes region of Central Africa
BACKGROUND : Theileria parva causes East Coast fever (ECF), one of the most economically important tick-borne diseases
of cattle in sub-Saharan Africa. A live immunisation approach using the infection and treatment method (ITM)
provides a strong long-term strain-restricted immunity. However, it typically induces a tick-transmissible carrier state
in cattle and may lead to spread of antigenically distinct parasites. Thus, understanding the genetic composition of T.
parva is needed prior to the use of the ITM vaccine in new areas. This study examined the sequence diversity and the
evolutionary and biogeographical dynamics of T. parva within the African Great Lakes region to better understand the
epidemiology of ECF and to assure vaccine safety. Genetic analyses were performed using sequences of two antigencoding
genes, Tp1 and Tp2, generated among 119 T. parva samples collected from cattle in four agro-ecological zones
of DRC and Burundi.
RESULTS : The results provided evidence of nucleotide and amino acid polymorphisms in both antigens, resulting
in 11 and 10 distinct nucleotide alleles, that predicted 6 and 9 protein variants in Tp1 and Tp2, respectively. Theileria
parva samples showed high variation within populations and a moderate biogeographical sub-structuring due to the
widespread major genotypes. The diversity was greater in samples from lowlands and midlands areas compared to
those from highlands and other African countries. The evolutionary dynamics modelling revealed a signal of selective
evolution which was not preferentially detected within the epitope-coding regions, suggesting that the observed
polymorphism could be more related to gene flow rather than recent host immune-based selection. Most alleles
isolated in the Great Lakes region were closely related to the components of the trivalent Muguga vaccine.
CONCLUSIONS : Our findings suggest that the extensive sequence diversity of T. parva and its biogeographical distribution
mainly depend on host migration and agro-ecological conditions driving tick population dynamics. Such
patterns are likely to contribute to the epidemic and unstable endemic situations of ECF in the region. However, the fact that ubiquitous alleles are genetically similar to the components of the Muguga vaccine together with the limited
geographical clustering may justify testing the existing trivalent vaccine for cross-immunity in the region.Additional file 1: Table S1. Cattle blood sample distribution across agroecological
zones.Additional file 2: Table S2. Nucleotide and amino acid sequences of Tp1
and Tp2 antigen epitopes from T. parva Muguga reference sequence.Additional file 3: Table S3. Characteristics of 119 T. parva samples
obtained from cattle in different agro-ecological zones (AEZs) of The
Democratic Republic of Congo and Burundi.Additional file 4: Figure S1. Multiple sequence alignment of the 11 Tp1
gene alleles obtained in this study.Additional file 5: Table S4. Estimates of evolutionary divergence
between gene alleles for Tp1 and Tp2, using proportion nucleotide
distance.Additional file 6: Table S5. Tp1 and Tp2 genes alleles with their corresponding
antigen variants.Additional file 7: Table S6. Amino acid variants of Tp1 and Tp2 CD8+
T
cell target epitopes of T. parva from DRC and Burundi.Additional file 8: Figure S2. Multiple sequence alignment of the 10 Tp2
gene alleles obtained in this study.Additional file 9: Table S7. Distribution of Tp1 gene alleles of T. parva
from cattle and buffalo in the sub-Saharan region of Africa.Additional file 10: Table S8. Distribution of Tp2 gene alleles of T. parva
from cattle and buffalo in the sub-Saharan region of Africa.Additional file 11: Figure S3. Neighbor-joining tree showing phylogenetic
relationships among 48 Tp1 gene alleles described in Africa.Additional file 12: Figure S4. Phylogenetic tree showing the relationships
among concatenated Tp1 and Tp2 nucleotide sequences of 93 T.
parva samples from cattle in DRC and Burundi.This study is part of the PhD work supported by the University of Namur (UNamur,
Belgium) through the UNamur-CERUNA institutional PhD grant awarded
to GSA for bioinformatic analyses, interpretation of data and manuscript write
up in Belgium. The laboratory aspects (molecular biology analysis) of the
project were supported by the BecA-ILRI Hub through the Africa Biosciences
Challenge Fund (ABCF) programme. The ABCF Programme is funded by
the Australian Department for Foreign Affairs and Trade (DFAT) through the
BecA-CSIRO partnership; the Syngenta Foundation for Sustainable Agriculture
(SFSA); the Bill & Melinda Gates Foundation (BMGF); the UK Department for International Development (DFID); and the Swedish International Development
Cooperation Agency (Sida). The ABCF Fellowship awarded to GAS was
funded by BMGF grant (OPP1075938). Sample collection, field equipment and
preliminary sample processing were supported through the “Theileria” project
co-funded to the Université Evangélique en Afrique (UEA) by the Agence
Universitaire de la Francophonie (AUF) and the Communauté Economique
des Pays des Grands Lacs (CEPGL). The International Foundation for Science
(IFS, Stockholm, Sweden) supported the individual scholarship awarded to
GSA (grant no. IFS-92890CA3) for field work and part of field equipment to the
“Theileria” project.http://www.parasitesandvectors.comam2020Veterinary Tropical Disease
Invasion success of a widespread invasive predator may be explained by a high predatory efficacy but may be influenced by pathogen infection
Invasive alien species (IAS) can drive community change through ecological interactions. Parasites and pathogens can play an important role in community function including mitigating or enhancing IAS impacts. Despite this, the degree to which pathogen pressure influences IAS impacts remains poorly understood. We quantified the predatory behaviour of the highly invasive alien harlequin ladybird (Harmonia axyridis) and two UK native species, the 7-spot (Coccinella septempunctata) and 2-spot (Adalia bipunctata) ladybirds, using comparative functional response experiments. We investigated the impacts of pathogen infection on the predatory ability of the ladybirds by exposing individuals to Beauveria bassiana, a widespread entomopathogen. Invasive H. axyridis was a more efficient predator than both the native A. bipunctata and C. septempunctata, often having higher attack and/or lower prey handling time coefficients, whereas native A. bipunctata were the least efficient predators. These differences were found in both adult and larval life-stages. Beauveria bassiana infection significantly altered the predatory efficiency of adult and larval ladybird predators. The effects of pathogenic infection differed between species and life-stage but in many cases infection resulted in a reduced predatory ability. We suggest that the interactions between IAS and pathogens are integral to determining invasion success and impact
Invasion success of a widespread invasive predator may be explained by a high predatory efficacy but may be influenced by pathogen infection
Invasive alien species (IAS) can drive community change through ecological interactions. Parasites and pathogens can play an important role in community function including mitigating or enhancing IAS impacts. Despite this, the degree to which pathogen pressure influences IAS impacts remains poorly understood. We quantified the predatory behaviour of the highly invasive alien harlequin ladybird (Harmonia axyridis) and two UK native species, the 7-spot (Coccinella septempunctata) and 2-spot (Adalia bipunctata) ladybirds, using comparative functional response experiments. We investigated the impacts of pathogen infection on the predatory ability of the ladybirds by exposing individuals to Beauveria bassiana, a widespread entomopathogen. Invasive H. axyridis was a more efficient predator than both the native A. bipunctata and C. septempunctata, often having higher attack and/or lower prey handling time coefficients, whereas native A. bipunctata were the least efficient predators. These differences were found in both adult and larval life-stages. Beauveria bassiana infection significantly altered the predatory efficiency of adult and larval ladybird predators. The effects of pathogenic infection differed between species and life-stage but in many cases infection resulted in a reduced predatory ability. We suggest that the interactions between IAS and pathogens are integral to determining invasion success and impact
Rhipicephalus appendiculatus burdens on Cattle in Relation to Age and Sex of the Host
Adult Rhipicephalus appendiculatus burdens on indigenous cattle in the Southern Province of Zambia were determined. Older animals were infested with significantly higher numbers of ticks than younger animals and male cattle had higher infestations than females of comparable age
Modeling diapause termination of Rhipicephalus appendiculatus using statistical tools to detect sudden behavioral changes and time dependencies
This paper presents statistical methodology to analyze longitudinal binary responses for which a sudden change in the response occurs in time. Probability plots, transition matrices, and change-point models and more advanced techniques such as generalized auto-regression models and hidden Markov chains are presented and applied on a study on the activity of Rhipicephalus appendiculatus, the major vector of Theileria parva, a fatal disease in cattle. This study presents individual measurements on female R. appendiculatus, which are terminating their diapause (resting status) and become active. Comprehending activity patterns is very important to better understand the ecology of R. appendiculatus. The model indicates that activity and non-activity act in an absorbing way meaning that once a tick becomes active it shows a tendency to remain active. The change-point model estimates that the sudden change in activity happens on December 10. The reaction of ticks on acceleration and changes in rainfall and temperature indicates that ticks can sense climatic changes. The study revealed the underlying not visually observable states during diapause development of the adult tick of R. appendiculatus. These states could be related to phases during the dynamic event of diapause development and post-diapause activity in R. appendiculatus