Aquatic Invertebrate Community Structure, Biological Condition, Habitat, and Water Quality at Ozark National Scenic Riverways, Missouri, 2005-2014

Ozark National Scenic Riverways (OZAR) was established to protect the corridor of the Current River and its major tributary, the Jacks Fork. The Current River is one of the few remaining free-flowing rivers in the U.S., with much of its base flow coming from several large springs. To assess the biological condition of these rivers, aquatic invertebrate community structure was monitored from 2005 to 2014. Benthic invertebrate samples and associated habitat and water quality data were collected from each of nine sampling sites using a Slack-Surber sampler. The Stream Condition Index (SCI), a multimetric index that incorporates taxa richness, EPT (Ephemeroptera, Plecoptera, Trichoptera) richness, Shannon’s diversity index, and Hilsenhoff Biotic Index (HBI), was calculated. The benthic invertebrate fauna was diverse with 155 distinct taxa identified from all sites. Mean taxa richness was high, ranging from 22 to 30 among sites. The invertebrate taxa of the Current River and Jacks Fork are largely intolerant across all taxa represented (mean tolerance value= ~4.25). Mean HBI did not exceed 3.9 in the Current River or 4.4 for the Jacks Fork. Mean SCI scores across sampling sites generally were well above 16, indicating they are not impaired. Habitat and water quality data were summarized, but they were poorly correlated with individual invertebrate metrics. Sørenson’s similarity index was used to assess community similarity among sites, and similarity scores were then analyzed using ascendant hierarchical cluster analysis. Similarity among sites was 72% or greater. Cluster analysis showed that Current River and Jacks Fork sites clustered separately and in a downstream progression. The uppermost collection site on the Current River was most unlike the other sites, which probably relates to the distinct physical features of that site compared to the others. Nonmetric Multidimensional Scaling (NMDS) was used to evaluate the relationship of invertebrate metrics to habitat and water quality. The NMDS model was found to be a good fit (stress=0.04) and specific conductance, temperature, discharge, filamentous algae and aquatic vegetation were among the most important habitat variables in defining the relationship among sampling sites. The three lower Current River and Jacks Fork sites each were closely grouped in ordination space, but the three upper Current River sites were farther apart from each other. The influence of several large volume springs near those sites is suspected of producing such disparity through press type disturbances. Although the invertebrate communities and water quality in the Current River and Jacks Fork are largely sound and have high biological condition, ongoing and projected threats to these resources remain, and those threats largely originate outside park jurisdictional boundaries. Inherent variability of invertebrate community diversity across sites and years highlights the importance of using multi-metric assessments and multiyear monitoring to support management decisions

Local Behavior of the First-Order Gradient Correction to the Thomas-Fermi Kinetic Energy Functional

The first order gradient correction to the Thomas-Fermi functional, proposed by Haq, Chattaraj and Deb (Chem. Phys. Lett. vol. 81, 8031, 1984) has been studied by evaluating both the total kinetic energy and the local kinetic energy density. For testing the kinetic energy density we evaluate its deviation from an exact result through a quality factor, a parameter that reflects the quality of the functionals in a better way than their relative errors. The study is performed on two different systems: light atoms (up to Z=18) and a noninteracting model of fermions confined in a Coulombic-type potential. It is found than this approximation gives very low relative errors and a better local behavior than any of the usual generalized gradient approximation semilocal kinetic density functionals.Comment: 7 pages, 2 tables, 4 figure

Escape path complexity and its context dependency in Pacific blue-eyes (Pseudomugil signifer)

The escape trajectories animals take following a predatory attack appear to show high degrees of apparent 'randomness' - a property that has been described as 'protean behaviour'. Here we present a method of quantifying the escape trajectories of individual animals using a path complexity approach. When fish (Pseudomugil signifer) were attacked either on their own or in groups, we find that an individual's path rapidly increases in entropy (our measure of complexity) following the attack. For individuals on their own, this entropy remains elevated (indicating a more random path) for a sustained period (10 seconds) after the attack, whilst it falls more quickly for individuals in groups. The entropy of the path is context dependent. When attacks towards single fish come from greater distances, a fish's path shows less complexity compared to attacks that come from short range. This context dependency effect did not exist, however, when individuals were in groups. Nor did the path complexity of individuals in groups depend on a fish's local density of neighbours. We separate out the components of speed and direction changes to determine which of these components contributes to the overall increase in path complexity following an attack. We found that both speed and direction measures contribute similarly to an individual's path's complexity in absolute terms. Our work highlights the adaptive behavioural tactics that animals use to avoid predators and also provides a novel method for quantifying the escape trajectories of animals.Comment: 9 page

Incipient ferroelectricity in 2.3% tensile-strained CaMnO3 films

Epitaxial CaMnO3 films grown with 2.3% tensile strain on (001)-oriented LaAlO3 substrates are found to be incipiently ferroelectric below 25 K. Optical second harmonic generation (SHG) was used for the detection of the incipient polarization. The SHG analysis reveals that CaMnO3 crystallites with in-plane orientation of the orthorhombic b axis contribute to an electric polarization oriented along the orthorhombic a (resp.\ c) axis in agreement with the predictions from density functional calculations

Stabilizing the surface morphology of Si1–x–yGexCy/Si heterostructures grown by molecular beam epitaxy through the use of a silicon-carbide source

Si1–x–yGexCy/Si superlattices were grown by solid-source molecular beam epitaxy using silicon carbide as a source of C. Samples consisting of alternating layers of nominally 25 nm Si1–x–yGexCy and 35 nm Si for 10 periods were characterized by high-resolution x-ray diffraction, transmission electron microscopy (TEM), and Rutherford backscattering spectrometry to determine strain, thickness, and composition. C resonance backscattering and secondary ion mass spectrometries were used to measure the total C concentration in the Si1–x–yGexCy layers, allowing for an accurate determination of the substitutional C fraction to be made as a function of growth rate for fixed Ge and substitutional C compositions. For C concentrations close to 1%, high-quality layers were obtained without the use of Sb-surfactant mediation. These samples were found to be structurally perfect to a level consistent with cross-sectional TEM (< 10^7 defects/cm^2) and showed considerably improved homogeneity as compared with similar structures grown using graphite as the source for C. For higher Ge and C concentrations, Sb-surfactant mediation was found to be required to stabilize the surface morphology. The maximum value of substitutional C concentration, above which excessive generation of stacking fault defects caused polycrystalline and/or amorphous growth, was found to be approximately 2.4% in samples containing between 25 and 30% Ge. The fraction of substitutional C was found to decrease from roughly 60% by a factor of 0.86 as the Si1–x–yGexCy growth rate increased from 0.1 to 1.0 nm/s

A photometricity and extinction monitor at the Apache Point Observatory

An unsupervised software ``robot'' that automatically and robustly reduces and analyzes CCD observations of photometric standard stars is described. The robot measures extinction coefficients and other photometric parameters in real time and, more carefully, on the next day. It also reduces and analyzes data from an all-sky $10 \mu m$ camera to detect clouds; photometric data taken during cloudy periods are automatically rejected. The robot reports its findings back to observers and data analysts via the World-Wide Web. It can be used to assess photometricity, and to build data on site conditions. The robot's automated and uniform site monitoring represents a minimum standard for any observing site with queue scheduling, a public data archive, or likely participation in any future National Virtual Observatory.Comment: accepted for publication in A

Size, Shape and Low Energy Electronic Structure of Carbon Nanotubes

A theory of the long wavelength low energy electronic structure of graphite-derived nanotubules is presented. The propagating $\pi$ electrons are described by wrapping a massless two dimensional Dirac Hamiltonian onto a curved surface. The effects of the tubule size, shape and symmetry are included through an effective vector potential which we derive for this model. The rich gap structure for all straight single wall cylindrical tubes is obtained analytically in this theory, and the effects of inhomogeneous shape deformations on nominally metallic armchair tubes are analyzed.Comment: 5 pages, 3 postscript figure

Cleaning the USNO-B Catalog through automatic detection of optical artifacts

The USNO-B Catalog contains spurious entries that are caused by diffraction spikes and circular reflection halos around bright stars in the original imaging data. These spurious entries appear in the Catalog as if they were real stars; they are confusing for some scientific tasks. The spurious entries can be identified by simple computer vision techniques because they produce repeatable patterns on the sky. Some techniques employed here are variants of the Hough transform, one of which is sensitive to (two-dimensional) overdensities of faint stars in thin right-angle cross patterns centered on bright (<13 \mag) stars, and one of which is sensitive to thin annular overdensities centered on very bright (<7 \mag) stars. After enforcing conservative statistical requirements on spurious-entry identifications, we find that of the 1,042,618,261 entries in the USNO-B Catalog, 24,148,382 of them (2.3 \percent) are identified as spurious by diffraction-spike criteria and 196,133 (0.02 \percent) are identified as spurious by reflection-halo criteria. The spurious entries are often detected in more than 2 bands and are not overwhelmingly outliers in any photometric properties; they therefore cannot be rejected easily on other grounds, i.e., without the use of computer vision techniques. We demonstrate our method, and return to the community in electronic form a table of spurious entries in the Catalog.Comment: published in A

Imaging Polarimeter Arrays for Near-Millimeter Waves

An integrated-circuit antenna array has been developed that images both polarization and intensity. The array consists of a row of antennas that lean alternately left and right, creating two interlaced sub-arrays that respond to different polarizations. The arrays and the bismuth bolometer detectors are made by a photoresist shadowing technique that requires only one photolithographic mask. The array has measured polarization at a wavelength of 800 µm with an absolute accuracy of 0.8° and a relative precision of 7 arc min. and has demonstrated nearly diffraction-Iimited resolutiort of a 20° step in polarization