7,892 research outputs found
Black Holes and Naked Singularities in Low Energy Limit of String Gravity with Modulus Field
We show that the black hole solutions of the effective string theory action,
where one-loop effects that couple the moduli to gravity via a Gauss-Bonnet
term are taken into account, admit primary scalar hair. The requirement of
absence of naked singularities imposes an upper bound on the scalar charges.Comment: more details are added and some misprint are correcte
Neural Networks for Modeling and Control of Particle Accelerators
We describe some of the challenges of particle accelerator control, highlight
recent advances in neural network techniques, discuss some promising avenues
for incorporating neural networks into particle accelerator control systems,
and describe a neural network-based control system that is being developed for
resonance control of an RF electron gun at the Fermilab Accelerator Science and
Technology (FAST) facility, including initial experimental results from a
benchmark controller.Comment: 21 p
A study of the phase transition in the usual statistical model for nuclear multifragmentation
We use a simplified model which is based on the same physics as inherent in
most statistical models for nuclear multifragmentation. The simplified model
allows exact calculations for thermodynamic properties of systems of large
number of particles. This enables us to study a phase transition in the model.
A first order phase transition can be tracked down. There are significant
differences between this phase transition and some other well-known cases
Model-guided design of ligand-regulated RNAi for programmable control of gene expression
Progress in constructing biological networks will rely on the development of more advanced components that can be predictably modified to yield optimal system performance. We have engineered an RNA-based platform, which we call an shRNA switch, that provides for integrated ligand control of RNA interference (RNAi) by modular coupling of an aptamer, competing strand, and small hairpin (sh) RNA stem into a single component that links ligand concentration and target gene expression levels. A combined experimental and mathematical modelling approach identified multiple tuning strategies and moves towards a predictable framework for the forward design of shRNA switches. The utility of our platform is highlighted by the demonstration of fine-tuning, multi-input control, and model-guided design of shRNA switches with an optimized dynamic range. Thus, shRNA switches can serve as an advanced component for the construction of complex biological systems and offer a controlled means of activating RNAi in disease therapeutics
InSb charge coupled infrared imaging device: The 20 element linear imager
The design and fabrication of the 8585 InSb charge coupled infrared imaging device (CCIRID) chip are reported. The InSb material characteristics are described along with mask and process modifications. Test results for the 2- and 20-element CCIRID's are discussed, including gate oxide characteristics, charge transfer efficiency, optical mode of operation, and development of the surface potential diagram
Hyperuniformity, quasi-long-range correlations, and void-space constraints in maximally random jammed particle packings. II. Anisotropy in particle shape
We extend the results from the first part of this series of two papers by
examining hyperuniformity in heterogeneous media composed of impenetrable
anisotropic inclusions. Specifically, we consider maximally random jammed
packings of hard ellipses and superdisks and show that these systems both
possess vanishing infinite-wavelength local-volume-fraction fluctuations and
quasi-long-range pair correlations. Our results suggest a strong generalization
of a conjecture by Torquato and Stillinger [Phys. Rev. E. 68, 041113 (2003)],
namely that all strictly jammed saturated packings of hard particles, including
those with size- and shape-distributions, are hyperuniform with signature
quasi-long-range correlations. We show that our arguments concerning the
constrained distribution of the void space in MRJ packings directly extend to
hard ellipse and superdisk packings, thereby providing a direct structural
explanation for the appearance of hyperuniformity and quasi-long-range
correlations in these systems. Additionally, we examine general heterogeneous
media with anisotropic inclusions and show for the first time that one can
decorate a periodic point pattern to obtain a hard-particle system that is not
hyperuniform with respect to local-volume-fraction fluctuations. This apparent
discrepancy can also be rationalized by appealing to the irregular distribution
of the void space arising from the anisotropic shapes of the particles. Our
work suggests the intriguing possibility that the MRJ states of hard particles
share certain universal features independent of the local properties of the
packings, including the packing fraction and average contact number per
particle.Comment: 29 pages, 9 figure
Synthetic control of a fitness tradeoff in yeast nitrogen metabolism
Background:
Microbial communities are involved in many processes relevant to industrial and medical biotechnology, such as the formation of biofilms, lignocellulosic degradation, and hydrogen production. The manipulation of synthetic and natural microbial communities and their underlying ecological parameters, such as fitness, evolvability, and variation, is an increasingly important area of research for synthetic biology.
Results:
Here, we explored how synthetic control of an endogenous circuit can be used to regulate a tradeoff between fitness in resource abundant and resource limited environments in a population of Saccharomyces cerevisiae. We found that noise in the expression of a key enzyme in ammonia assimilation, Gdh1p, mediated a tradeoff between growth in low nitrogen environments and stress resistance in high ammonia environments. We implemented synthetic control of an endogenous Gdh1p regulatory network to construct an engineered strain in which the fitness of the population was tunable in response to an exogenously-added small molecule across a range of ammonia environments.
Conclusion:
The ability to tune fitness and biological tradeoffs will be important components of future efforts to engineer microbial communities
Rare isotope production in statistical multifragmentation
Producing rare isotopes through statistical multifragmentation is
investigated using the Mekjian method for exact solutions of the canonical
ensemble. Both the initial fragmentation and the the sequential decay are
modeled in such a way as to avoid Monte Carlo and thus provide yields for
arbitrarily scarce fragments. The importance of sequential decay, exact
particle-number conservation and the sensitivities to parameters such as
density and temperature are explored. Recent measurements of isotope ratios
from the fragmentation of different Sn isotopes are interpreted within this
picture.Comment: 10 eps figure
Molecular detection of culture-confirmed bacterial bloodstream infections with limited enrichment time
Conventional blood culturing using automated instrumentation with phenotypic identification requires a significant amount of time to generate results. This study investigated the speed and accuracy of results generated using PCR and pyrosequencing compared to the time required to obtain Gram stain results and final culture identification for cases of culture-confirmed bloodstream infections. Research and physician-ordered blood cultures were drawn concurrently. Aliquots of the incubating research blood culture fluid were removed hourly between 5 and 8 h, at 24 h, and again at 5 days. DNA was extracted from these 6 time point aliquots and analyzed by PCR and pyrosequencing for bacterial rRNA gene targets. These results were then compared to those of the physician-ordered blood culture. PCR and pyrosequencing accurately identified 92% of all culture-confirmed cases after a mean enrichment time of 5.8 ± 2.9 h. When the time needed to complete sample processing was included for PCR and pyrosequencing protocols, the molecular approach yielded results in 11.8 ± 2.9 h compared to means of 27.9 ± 13.6 h to obtain the Gram stain results and 81.6 ± 24.0 h to generate the final culture-based identification. The molecular approach enabled accurate detection of most bacteria present in incubating blood culture bottles on average about 16 h sooner than Gram stain results became available and approximately 3 days sooner than the phenotypic identification was entered in the Laboratory Information System. If implemented, this more rapid molecular approach could minimize the number of doses of unnecessary or ineffective antibiotics administered to patients
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