1,815 research outputs found

    Geology of Northeastern Victoria Land, Antarctica

    Get PDF
    The northeastern corner of Victoria Land-an area of 50,000 square kilometers east of the Rennick Glacier and north of the Newnes Ice Shelf-was studied geologically during a helicopter-supported reconnaissance in 1964,extending and refining previous work by New Zealand geologists. The oldest rocks of the region are the plutonic rocks of the Freyberg Mountains and other ranges in the southwest part of the region. These schists, gneisses, migmatites, and granitic rocks are presumed to be correlative with the late Precambrian and early Paleozoic terrane of the Transantarctic Mountains. Lying east of these plutonic rocks are low-grade metamorphosed clastic sedimentary rocks presumed to be of middle Paleozoic age; the steep contact with the plutonic rocks appears to be a sheared unconformity. The basal (?) formation, polymict conglomerate and black slate, forms a northwest-trending outcrop belt 10km wide of steeply dipping rocks. Further northeast and presumably next higher stratigraphically is quartzite and quartz conglomerate, forming an outcrop belt 8-15km wide. The remaining metasedimentary rocks belong to the Robertson Bay Formation of metasiltstone and metagraywacke, tightly folded about northwest-trending axes and forming an outcrop belt 150km wide, from the Millen Range to Robertson Bay. Numerous stocks and small batholiths of hornblende-biotite granodiorite intrude and bake the Robertson Bay Formation. The continental Beacon Sandstone, intruded by thick dikes and sills of Jurassic (?) diabase, overlies the older rocks of the southwestern part of the region, and has been brocken by normal faults and folded gently. The Beacon is in turn overlain by plateau basalts. Late Cenozoic basalt-trachyte volcanism along the Ross Sea coast has formed large, north-trending Adare, Hallett, and Daniell Peninsulas and similar Coulman Island. Each of these masses consists largely of volcanic rocks extruded beneath ice sheets at least as thick as 1500m; the continental ice cap was much more extensive at times past than it is now. The volcanic rocks are chaotic palagonite breccias, flow breccias, pillow lavas, and complexes intrusive into them. Subaerial calderas, flows, and cones formed along the crestal rift zones. The pre-Tertiary rocks are upraised along faults at the edge of the Ross Sea. Peaks reaching altitudes of 4000m near the coast attest to the magnitude of late Cenozoic uplift

    Direct Evidence That the Reaction Intermediate of Metallo-β-lactamase L1 Is Metal Bound

    Get PDF
    In an effort to probe the structure of the reaction intermediate of metallo-β-lactamase L1 when reacted with nitrocefin and other β-lactams, time-dependent absorption and rapid-freeze-quench (RFQ) EPR spectra were obtained using the Co(II)-substituted form of the enzyme. When using nitrocefin as the substrate, time-dependent absorption spectra demonstrate that Co(II)-substituted L1 utilizes a reaction mechanism, similar to that of the native Zn(II) enzyme, in which a short-lived intermediate forms. RFQ-EPR spectra of this intermediate demonstrate that the binding of substrate results in a change in the electronic properties of one or both of the Co(II)\u27s in the enzyme that is consistent with a change in the coordination sphere of this metal ion. This observation provides evidence that the reaction intermediate is a metal-bound species. RFQ-EPR studies also demonstrate that other β-lactams, such as cephalothin, meropenem, and penicillin G, proceed through an electronically similar complex and that the role of metal is similar in all cases. EPR spectroscopy has also identified distinct product-bound species of L1, indicating that reversible product binding must be considered in all future kinetic mechanisms. Consideration of the time-dependent optical and EPR studies in light of available crystallographic information indicates the intimate involvement of the metal ion in the Zn2-binding site of L1 in the hydrolytic reaction

    Arctic and subarctic environmental analyses utilizing ERTS-1 imagery

    Get PDF
    The author has identified the following significant results. ERTS-1 imagery provides a means of distinguishing and monitoring estuarine surface water circulation patterns and changes in the relative sediment load of discharging rivers on a regional basis. Physical boundaries mapped from ERTS-1 imagery in combination with ground truth obtained from existing small scale maps and other sources resulted in improved and more detailed maps of permafrost terrain and vegetation for the same area. Snowpack cover within a research watershed has been analyzed and compared to ground data. Large river icings along the proposed Alaska pipeline route from Prudhoe Bay to the Brooks Range have been monitored. Sea ice deformation and drift northeast of Point Barrow, Alaska have been measured during a four day period in March and shore-fast ice accumulation and ablation along the west coast of Alaska have been mapped for the spring and early summer seasons

    Conformational Dynamics of metallo-β-lactamase CcrA during Catalysis Investigated by Using DEER Spectroscopy

    Get PDF
    Previous crystallographic and mutagenesis studies have implicated the role of a position-conserved hairpin loop in the metallo-β-lactamases in substrate binding and catalysis. In an effort to probe the motion of that loop during catalysis, rapid-freeze-quench double electron–electron resonance (RFQ-DEER) spectroscopy was used to interrogate metallo-β-lactamase CcrA, which had a spin label at position 49 on the loop and spin labels (at positions 82, 126, or 233) 20–35 Å away from residue 49, during catalysis. At 10 ms after mixing, the DEER spectra show distance increases of 7, 10, and 13 Å between the spin label at position 49 and the spin labels at positions 82, 126, and 233, respectively. In contrast to previous hypotheses, these data suggest that the loop moves nearly 10 Å away from the metal center during catalysis and that the loop does not clamp down on the substrate during catalysis. This study demonstrates that loop motion during catalysis can be interrogated on the millisecond time scale

    Plant evolution can mediate negative effects from honey bees on wild pollinators

    Get PDF
    Pollinators are introduced to agroecosystems to provide pollination services. Introductions of managed pollinators often promote ecosystem services, but it remains largely unknown whether they also affect evolutionary mutualisms between wild pollinators and plants. Here, we developed a model to assess effects of managed honey bees on mutualisms between plants and wild pollinators. Our model tracked how interactions among wild pollinators and honey bees affected pollinator and plant populations. We show that when managed honey bees have a competitive advantage over wild pollinators, or a greater carrying capacity, the honey bees displace the wild pollinator. This leads to reduced plant density because plants benefit less by visits from honey bees than wild pollinators that coevolved with the plants. As wild pollinators are displaced, plants evolve by increasing investment in traits that are attractive for honey bees but not wild pollinators. This evolutionary switch promotes wild pollinator displacement. However, higher mutualism investment costs by the plant to the honey bee can promote pollinator coexistence. Our results show plant evolution can promote displacement of wild pollinators by managed honey bees, while limited plant evolution may lead to pollinator coexistence. More broadly, effects of honey bees on wild pollinators in agroecosystems, and effects on ecosystem services, may depend on the capacity of plant populations to evolve

    Probing substrate binding to Metallo-β-Lactamase L1 from Stenotrophomonas maltophilia by using site-directed mutagenesis

    Get PDF
    BACKGROUND: The metallo-β-lactamases are Zn(II)-containing enzymes that hydrolyze the β-lactam bond in penicillins, cephalosporins, and carbapenems and are involved in bacterial antibiotic resistance. There are at least 20 distinct organisms that produce a metallo-β-lactamase, and these enzymes have been extensively studied using X-ray crystallographic, computational, kinetic, and inhibition studies; however, much is still unknown about how substrates bind and the catalytic mechanism. In an effort to probe substrate binding to metallo-β-lactamase L1 from Stenotrophomonas maltophilia, nine site-directed mutants of L1 were prepared and characterized using metal analyses, CD spectroscopy, and pre-steady state and steady state kinetics. RESULTS: Site-directed mutations were generated of amino acids previously predicted to be important in substrate binding. Steady-state kinetic studies using the mutant enzymes and 9 different substrates demonstrated varying K(m) and k(cat) values for the different enzymes and substrates and that no direct correlation between K(m) and the effect of the mutation on substrate binding could be drawn. Stopped-flow fluorescence studies using nitrocefin as the substrate showed that only the S224D and Y228A mutants exhibited weaker nitrocefin binding. CONCLUSIONS: The data presented herein indicate that Ser224, Ile164, Phe158, Tyr228, and Asn233 are not essential for tight binding of substrate to metallo-β-lactamase L1. The results in this work also show that K(m) values are not reliable for showing substrate binding, and there is no correlation between substrate binding and the amount of reaction intermediate formed during the reaction. This work represents the first experimental testing of one of the computational models of the metallo-β-lactamases

    LISA Data Analysis using MCMC methods

    Full text link
    The Laser Interferometer Space Antenna (LISA) is expected to simultaneously detect many thousands of low frequency gravitational wave signals. This presents a data analysis challenge that is very different to the one encountered in ground based gravitational wave astronomy. LISA data analysis requires the identification of individual signals from a data stream containing an unknown number of overlapping signals. Because of the signal overlaps, a global fit to all the signals has to be performed in order to avoid biasing the solution. However, performing such a global fit requires the exploration of an enormous parameter space with a dimension upwards of 50,000. Markov Chain Monte Carlo (MCMC) methods offer a very promising solution to the LISA data analysis problem. MCMC algorithms are able to efficiently explore large parameter spaces, simultaneously providing parameter estimates, error analyses and even model selection. Here we present the first application of MCMC methods to simulated LISA data and demonstrate the great potential of the MCMC approach. Our implementation uses a generalized F-statistic to evaluate the likelihoods, and simulated annealing to speed convergence of the Markov chains. As a final step we super-cool the chains to extract maximum likelihood estimates, and estimates of the Bayes factors for competing models. We find that the MCMC approach is able to correctly identify the number of signals present, extract the source parameters, and return error estimates consistent with Fisher information matrix predictions.Comment: 14 pages, 7 figure

    Goα Regulates Volatile Anesthetic Action in Caenorhabditis elegans

    Get PDF
    To identify genes controlling volatile anesthetic (VA) action, we have screened through existing Caenorhabditis elegans mutants and found that strains with a reduction in Go signaling are VA resistant. Loss-of-function mutants of the gene goa-1, which codes for the α-subunit of Go, have EC_(50)s for the VA isoflurane of 1.7- to 2.4-fold that of wild type. Strains overexpressing egl-10, which codes for an RGS protein negatively regulating goa-1, are also isoflurane resistant. However, sensitivity to halothane, a structurally distinct VA, is differentially affected by Go pathway mutants. The RGS overexpressing strains, a goa-1 missense mutant found to carry a novel mutation near the GTP-binding domain, and eat-16(rf) mutants, which suppress goa-1(gf) mutations, are all halothane resistant; goa-1(null) mutants have wild-type sensitivities. Double mutant strains carrying mutations in both goa-1 and unc-64, which codes for a neuronal syntaxin previously found to regulate VA sensitivity, show that the syntaxin mutant phenotypes depend in part on goa-1 expression. Pharmacological assays using the cholinesterase inhibitor aldicarb suggest that VAs and GOA-1 similarly downregulate cholinergic neurotransmitter release in C. elegans. Thus, the mechanism of action of VAs in C. elegans is regulated by Goα, and presynaptic Goα-effectors are candidate VA molecular targets

    Visual and Motor Connectivity and the Distribution of Calcium-Binding Proteins in Macaque Frontal Eye Field: Implications for Saccade Target Selection

    Get PDF
    The frontal eye field (FEF) contributes to directing visual attention and saccadic eye movement through intrinsic processing, interactions with extrastriate visual cortical areas (e.g., V4), and projections to subcortical structures (e.g., superior colliculus, SC). Several models have been proposed to describe the relationship between the allocation of visual attention and the production of saccades. We obtained anatomical information that might provide useful constraints on these models by evaluating two characteristics of FEF. First, we investigated the laminar distribution of efferent connections from FEF to visual areas V4 + TEO and to SC. Second, we examined the laminar distribution of different populations of GABAergic neurons in FEF. We found that the neurons in FEF that project to V4 + TEO are located predominantly in the supragranular layers, colocalized with the highest density of calbindin- and calretinin-immunoreactive inhibitory interneurons. In contrast, the cell bodies of neurons that project to SC are found only in layer 5 of FEF, colocalized primarily with parvalbumin inhibitory interneurons. None of the neurons in layer 5 that project to V4 + TEO also project to SC. These results provide useful constraints for cognitive models of visual attention and saccade production by indicating that different populations of neurons project to extrastriate visual cortical areas and to SC. This finding also suggests that FEF neurons projecting to visual cortex and SC are embedded in different patterns of intracortical circuitry
    corecore