Saber: window-based hybrid stream processing for heterogeneous architectures

Modern servers have become heterogeneous, often combining multicore CPUs with many-core GPGPUs. Such heterogeneous architectures have the potential to improve the performance of data-intensive stream processing applications, but they are not supported by current relational stream processing engines. For an engine to exploit a heterogeneous architecture, it must execute streaming SQL queries with sufficient data-parallelism to fully utilise all available heterogeneous processors, and decide how to use each in the most effective way. It must do this while respecting the semantics of streaming SQL queries, in particular with regard to window handling. We describe SABER, a hybrid high-performance relational stream processing engine for CPUs and GPGPUs. SABER executes windowbased streaming SQL queries in a data-parallel fashion using all available CPU and GPGPU cores. Instead of statically assigning query operators to heterogeneous processors, SABER employs a new adaptive heterogeneous lookahead scheduling strategy, which increases the share of queries executing on the processor that yields the highest performance. To hide data movement costs, SABER pipelines the transfer of stream data between different memory types and the CPU/GPGPU. Our experimental comparison against state-ofthe-art engines shows that SABER increases processing throughput while maintaining low latency for a wide range of streaming SQL queries with small and large windows sizes

Monte Carlo Simulations of Ultrathin Magnetic Dots

In this work we study the thermodynamic properties of ultrathin ferromagnetic dots using Monte Carlo simulations. We investigate the vortex density as a function of the temperature and the vortex structure in monolayer dots with perpendicular anisotropy and long-range dipole interaction. The interplay between these two terms in the hamiltonian leads to an interesting behavior of the thermodynamic quantities as well as the vortex density.Comment: 10 figure

Oligonucleotide sequences forming short self-complimentary hairpins can expedite the down-regulation of Coprinopsis cinerea genes

Gene silencing in fungi is often induced by dsRNA hairpin forming constructs the preparation of which can require multiple cloning steps. To simplify gene silencing in the filamentous fungi we have evaluated a high throughput cloning method for target sequences using the homobasidiomycete Coprinopsis cinerea, the GFP reporter and a commercially available vector system. The pSUPER RNAi System™, which was developed for mammalian experiments, exploits the human H1 Polymerase III (Pol III) RNA gene promoter and expedites cloning/expression of specific user-defined oligonucleotide sequences to form short self-complimentary hairpins. Transformation of C. cinerea with pSUPER constructs harboring specific oligonucleotides (19 nt stem length) enabled recovery of transformants with reduced transcripts of the GFP transgene, that were less fluorescent in protein assays and microscopic phenotypes. This technological advance should expedite functional genomic studies in C. cinerea and has wider potential for utility in other homobasidiomycete and filamentous fungi

Two photon decay of π0\pi^0 and η\eta at finite temperature and density

A comparative study of the anomalous decays $\pi^0, \eta \to\gamma\gamma$, at finite temperature and at finite density, is performed in the framework of the three--flavor Nambu--Jona-Lasinio. The similarities and differences between both scenarios are discussed. In both cases the lifetimes of these mesons decrease significantly at the critical point, although this might not be sufficient to observe enhancement of these decays in heavy-ion collisions.Comment: 5 pages, 1 figure. Talk given at Strange Quark Matter 2004, Cape Town, South Africa, 15-20 September, 200

PAIRWISE VELOCITIES OF GALAXIES IN THE CFA AND SSRS2 REDSHIFT SURVEYS

(compressed version) We combine the CfA Redshift Survey (CfA2) and the Southern Sky Redshift Survey (SSRS2) to estimate the pairwise velocity dispersion of galaxies \sig12 on a scale of \sim 1 \hmpc. Both surveys are complete to an apparent magnitude limit $B(0)=15.5$. Our sample includes 12,812 galaxies distributed in a volume 1.8 \times 10^6 \hmpc3. We conclude: 1) The pairwise velocity dispersion of galaxies in the combined CfA2+SSRS2 redshift survey is \sig12=540 \kms \pm 180 \kms. Both the estimate and the variance of \sig12 significantly exceed the canonical values \sig12=340 \pm40 measured by Davis \& Peebles (1983) using CfA1. 2) We derive the uncertainty in \sig12 from the variation among subsamples with volumes on the order of $7 \times 10^5$ \hmpc3. This variation is nearly an order of magnitude larger than the formal error, 36 \kms, derived using least-squares fits to the CfA2+SSRS2 correlation function. This variation among samples is consistent with the conclusions of Mo \etal (1993) for a number of smaller surveys and with the analysis of CfA1 by Zurek \etal (1994). 3) When we remove Abell clusters with $R\ge1$ from our sample, the pairwise velocity dispersion of the remaining galaxies drops to 295 \pm 99 \kms. Thus the dominant source of variance in \sig12 is the shot noise contributed by dense virialized systems. 4) The distribution of pairwise velocities is consistent with an isotropic exponential with velocity dispersion independent of scale.Comment: 61 pages uuencoded, compressed postscript in 5 pieces. Also available in one piece at http://www.dao.nrc.ca/DAO/SCIENCE/science.htm

The possible importance of synchrotron/inverse Compton losses to explain fast mm-wave and hard X-ray emission of a solar event

The solar burst of 21 May 1984, presented a number of unique features. The time profile consisted of seven major structures (seconds), with a turnover frequency of greater than or approximately 90 GHz, well correlated in time to hard X-ray emission. Each structure consisted of multiple fast pulses (0.1 seconds), which were analyzed in detail. A proportionality between the repetition rate of the pulses and the burst fluxes at 90 GHz and greater than or approximately 100 keV hard X-rays, and an inverse proportionality between repetition rates and hard X-ray power law indices were found. A synchrotron/inverse Compton model was applied to explain the emission of the fast burst structures, which appear to be possible for the first three or four structures

The effect of surgical approach on the histology of the femoral head following resurfacing of the hip : analysis of retrieval specimens

Objectives: We aimed to determine the effect of surgical approach on the histology of the femoral head following resurfacing of the hip. Methods: We performed a histological assessment of the bone under the femoral component taken from retrieval specimens of patients having revision surgery following resurfacing of the hip. We compared the number of empty lacunae in specimens from patients who had originally had a posterior surgical approach with the number in patients having alternative surgical approaches. Results: We found a statistically significant increase in the percentage of empty lacunae in retrieval specimens from patients who had the posterior approach compared with other surgical approaches (p < 0.001). Conclusions: This indicates that the vascular compromise that occurs during the posterior surgical approach does have long-term effects on the bone of the femoral head, even if it does not cause overt avascular necrosis