Mediterranean sapropels: a mere geological problem or a resource for the study of a changing planet?

Sapropels are sediments rich in organic carbon occurring cyclically in the Mediterranean marine records and whose origin has been matter of great debate during the last decades. While the first sapropels were found in eastern Mediterranean sediments from the Miocene period, in this paper we focus on the layers that were subsequently found in sediment cores of Pliocene to Quaternary age from the eastern Mediterranean mostly. Since the very beginning of the history of studies on sapropels, authors inferred that those lev- els, being interbedded as dark layers in more or less normal light “open marine” sediments, formed during short-lived but catastrophic alterations in Mediterranean oceanographic conditions, probably linked to broader climate changes. In this paper, the main hypotheses regarding the origin of those sediments are described and we highlight the importance of sapropel records for the study of climatic and oceanographic variability in the Mediterranean area in the context of global climate change

Impact of global SST gradients on the Mediterranean runoff changes across the Plio-Pleistocene transition

This work explores the impact of the development of global meridional and zonal sea surfacetemperature (SST) gradients on the Mediterranean runoff variability during the Plio-Pleistocene transition,about 3 Ma. Results show that total annual mean Pliocene Mediterranean runoff is about 40% larger thanduring the preindustrial period due to more increased extratropical specific humidity. As a consequenceof a weakened and extended Hadley cell, the Pliocene northwest Africa hydrological network producesa discharge 30 times larger than today. Our results support the conclusion that during the Pliocene, theMediterranean water deficit was reduced relative to today due to a larger river discharge. By means ofa stand-alone atmospheric general circulation model, we simulate the separate impact of extratropicaland equatorial SST cooling on the Mediterranean runoff. While cooling the equatorial SST does not implysignificant changes to the Pliocene Mediterranean hydrological budget, the extratropical SST coolingincreases the water deficit due to a decrease in precipitation and runoff. Consequently, river dischargefrom this area reduces to preindustrial levels. The main teleconnections acting upon the Mediterraneanarea today, i.e., the North Atlantic Oscillation during winter and the “monsoon-desert” mechanism duringsummer already have a large influence on the climate of our Pliocene simulations. Finally, our results alsosuggest that in a climate state significantly warmer than today, changes of the Hadley circulation couldpotentially lead to increased water resources in northwest Africa

Impact of Orbital Parameters and Greenhouse Gas on the Climate of MIS 7 and MIS 5 Glacial Inceptions

This work explores the impact of orbital parameters and greenhouse gas concentrations on the climate of marine isotope stage (MIS) 7 glacial inception and compares it to that of MIS 5. The authors use a coupled atmosphere-ocean general circulation model to simulate the mean climate state of six time slices at 115, 122, 125, 229, 236, and 239 kyr, representative of a climate evolution from interglacial to glacial inception conditions. The simulations are designed to separate the effects of orbital parameters from those of greenhouse gas (GHG). Their results show that, in all the time slices considered, MIS 7 boreal lands mean annual climate is colder than the MIS 5 one. This difference is explained at 70% by the impact of the MIS 7 GHG. While the impact of GHG over Northern Hemisphere is homogeneous, the difference in temperature between MIS 7 and MIS 5 due to orbital parameters differs regionally and is linked with the Arctic Oscillation. The perennial snow cover is larger in all the MIS 7 experiments compared to MIS 5, as a result of MIS 7 orbital parameters, strengthened by GHG. At regional scale, Eurasia exhibits the strongest response to MIS 7 cold climate with a perennial snow area 3 times larger than in MIS 5 experiments. This suggests that MIS 7 glacial inception is more favorable over this area than over North America. Furthermore, at 239 kyr, the perennial snow covers an area equivalent to that of MIS 5 glacial inception (115 kyr). The authors suggest that MIS 7 glacial inception is more extensive than MIS 5 glacial inception over the high latitudes

Deep Learning Based Robotic Tool Detection and Articulation Estimation with Spatio-Temporal Layers

Surgical-tool joint detection from laparoscopic images is an important but challenging task in computer-assisted minimally invasive surgery. Illumination levels, variations in background and the different number of tools in the field of view, all pose difficulties to algorithm and model training. Yet, such challenges could be potentially tackled by exploiting the temporal information in laparoscopic videos to avoid per frame handling of the problem. In this letter, we propose a novel encoder-decoder architecture for surgical instrument joint detection and localization that uses three-dimensional convolutional layers to exploit spatio-temporal features from laparoscopic videos. When tested on benchmark and custom-built datasets, a median Dice similarity coefficient of 85.1% with an interquartile range of 4.6% highlights performance better than the state of the art based on single-frame processing. Alongside novelty of the network architecture, the idea for inclusion of temporal information appears to be particularly useful when processing images with unseen backgrounds during the training phase, which indicates that spatio-temporal features for joint detection help to generalize the solution

Laser-driven acceleration of quasi-monoenergetic, near-collimated titanium ions via a transparency-enhanced acceleration scheme

Laser-driven ion acceleration has been an active research area in the past two decades with the prospects of designing novel and compact ion accelerators. Many potential applications in science and industry require high-quality, energetic ion beams with low divergence and narrow energy spread. Intense laser ion acceleration research strives to meet these challenges and may provide high charge state beams, with some successes for carbon and lighter ions. Here we demonstrate the generation of well collimated, quasi-monoenergetic titanium ions with energies ∼145 and 180 MeV in experiments using the high-contrast(<10-9) and high-intensity (6× 1020 W cm-2) Trident laser and ultra-Thin (∼100 nm) titanium foil targets. Numerical simulations show that the foils become transparent to the laser pulses, undergoing relativistically induced transparency (RIT), resulting in a two-stage acceleration process which lasts until ∼2 ps after the onset of RIT. Such long acceleration time in the self-generated electric fields in the expanding plasma enables the formation of the quasi-monoenergetic peaks. This work contributes to the better understanding of the acceleration of heavier ions in the RIT regime, towards the development of next generation laser-based ion accelerators for various applications

Modeling Northern Hemisphere ice-sheet distribution during MIS 5 and MIS 7 glacial inceptions

The present manuscript compares Marine Iso- tope Stage 5 (MIS 5, 125–115 kyr BP) and MIS 7 (236– 229 kyr BP) with the aim to investigate the origin of the difference in ice-sheet growth over the Northern Hemi- sphere high latitudes between these last two inceptions. Our approach combines a low resolution coupled atmosphere– ocean–sea-ice general circulation model and a 3-D thermo- mechanical ice-sheet model to simulate the state of the ice sheets associated with the inception climate states of MIS 5 and MIS 7. Our results show that external forcing (orbitals and GHG) and sea-ice albedo feedbacks are the main fac- tors responsible for the difference in the land-ice initial state between MIS 5 and MIS 7 and that our cold climate model bias impacts more during a cold inception, such as MIS 7, than during a warm inception, such as MIS 5. In addition, if proper ice-elevation and albedo feedbacks are not taken into consideration, the evolution towards glacial inception is hardly simulated, especially for MIS 7. Finally, results high- light that while simulated ice volumes for MIS 5 glacial in- ception almost fit with paleo-reconstructions, the lack of pre- cipitation over high latitudes, identified as a bias of our cli- mate model, does not allow for a proper simulation of MIS 7 glacial inception

JNKs function as CDK4-activating kinases by phosphorylating CDK4 and p21

Cyclin D-CDK4/6 are the first cyclin-dependent kinase (CDK) complexes to be activated by mitogenic/oncogenic pathways. They have a central role in the cell multiplication decision and in its deregulation in cancer cells. We identified T172 phosphorylation of CDK4 rather than cyclin D accumulation as the distinctly regulated step determining CDK4 activation. This finding challenges the view that the only identified metazoan CDK-activating kinase, cyclin H-CDK7-Mat1 (CAK), which is constitutively active, is responsible for the activating phosphorylation of all cell cycle CDKs. We previously showed that T172 phosphorylation of CDK4 is conditioned by an adjacent proline (P173), which is not present in CDK6 and CDK1/2. Although CDK7 activity was recently shown to be required for CDK4 activation, we proposed that proline-directed kinases might specifically initiate the activation of CDK4. Here, we report that JNKs, but not ERK1/2 or CAK, can be direct CDK4-activating kinases for cyclin D-CDK4 complexes that are inactivated by p21-mediated stabilization. JNKs and ERK1/2 also phosphorylated p21 at S130 and T57, which might facilitate CDK7-dependent activation of p21-bound CDK4, however, mutation of these sites did not impair the phosphorylation of CDK4 by JNKs. In two selected tumor cells, two different JNK inhibitors inhibited the phosphorylation and activation of cyclin D1-CDK4-p21 but not the activation of cyclin D3-CDK4 that is mainly associated to p27. Specific inhibition by chemical genetics in MEFs confirmed the involvement of JNK2 in cyclin D1-CDK4 activation. Therefore, JNKs could be activating kinases for cyclin D1-CDK4 bound to p21, by independently phosphorylating both CDK4 and p21