231 research outputs found

    Explorar el uso de indicadores fenológicos basados ??en MODIS NDVI para clasificar las categorías generales de hábitats forestales

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    The cost effective monitoring of habitats and their biodiversity remains a challenge to date. Earth Observation (EO) has a key role to play in mapping habitat and biodiversity in general, providing tools for the systematic collection of environmental data. The recent GEO-BON European Biodiversity Observation Network project (EBONE) established a framework for an integrated biodiversity monitoring system. Underlying this framework is the idea of integrating in situ with EO and a habitat classification scheme based on General Habitat Categories (GHC), designed with an Earth Observation-perspective. Here we report on EBONE work that explored the use of NDVI-derived phenology metrics for the identification and mapping of Forest GHCs. Thirty-one phenology metrics were extracted from MODIS NDVI time series for Europe. Classifications to discriminate forest types were performed based on a Random Forests™ classifier in selected regions. Results indicate that date phenology metrics are generally more significant for forest type discrimination. The achieved class accuracies are generally not satisfactory, except for coniferous forests in homogeneous stands (77-82%). The main causes of low classification accuracies were identified as (i) the spatial resolution of the imagery (250 m) which led to mixed phenology signals; (ii) the GHC scheme classification design, which allows for parcels of heterogeneous covers, and (iii) the low number of the training samples available from field surveys. A mapping strategy integrating EO-based phenology with vegetation height information is expected to be more effective than a purely phenology-based approach

    Exploring the use of MODIS NDVI-based phenology indicators for classifying forest general habitat categories. Remote Sens

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    Abstract: The cost effective monitoring of habitats and their biodiversity remains a challenge to date. Earth Observation (EO) has a key role to play in mapping habitat and biodiversity in general, providing tools for the systematic collection of environmental data. The recent GEO-BON European Biodiversity Observation Network project (EBONE) established a framework for an integrated biodiversity monitoring system. Underlying this framework is the idea of integrating in situ with EO and a habitat classification scheme based on General Habitat Categories (GHC), designed with an Earth Observation-perspective. Here we report on EBONE work that explored the use of NDVI-derived phenology metrics for the identification and mapping of Forest GHCs. Thirty-one phenology metrics were extracted from MODIS NDVI time series for Europe. Classifications to discriminate forest types were performed based on a Random Forests ™ classifier in selected regions. Results indicate that date phenology metrics are generally more significant for forest type discrimination. The achieved class accuracies are generally not satisfactory, except for coniferous forests in homogeneous stands (77–82%). The main causes of low classification accuracies were identified as (i) the spatial resolution of the imagery (250 m) which led t

    Immediate changes in organic matter and plant available nutrients of Haplic Luvisol soils following different experimental burning intensities in Damak Forest, Hungary

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    One of the major pedological changes produced by wildfires is the drastic modification of forest soil systems properties. To our knowledge, large research gaps are currently present concerning the effect of such fires on forest Haplic Luvisols soils in Central Europe. In this study, the effects of experimental fires on soil organic matter and chemical properties at different burning intensities in a Central European forest were examined. The study was conducted at Damak Forest, in Hungary, ecosystem dominated by deciduous broadleaf trees, including the rare Hungarian oak Quercus frainetto Ten. The experimental fires were carried out in nine different plots on Haplic Luvisol soils transferred from Damak Forest to the burning site. Three types of fuel load were collected from the forest: litter layer, understorey and overstorey. Groups of three plots were burned at low (litter layer), medium intensity (litter and understorey) and high intensity (litter, understorey and overstorey). Pre-fire and post-fire soil samples were taken from each plot, analysed in the laboratory and statistically compared. Key plant nutrients of organic matter, carbon, potassium, calcium, magnesium and phosphorus were analysed from each sample. No significant differences in soil organic matter and carbon between pre- and post-fire samples were observed, but high intensity fires did increase soil pH significantly. Calcium, magnesium and phosphorus availability increased significantly at all fire intensity levels. Soil potassium levels significantly decreased (ca. 50%) for all intensity treatments, in contrast to most literature. Potassium is a key nutrient for ion transport in plants, and any loss of this nutrient from the soil could have significant effects on local agricultural production. Overall, our findings provide evidence that support the maintaining of the current Hungarian fire prevention policy. © 2019 by the authors

    Secondary forest and shrubland dynamics in a highly transformed landscape in the Northern Andes of Colombia (1985-2015)

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    Understanding the dynamics of natural ecosystems in highly transformed landscapes is key to the design of regional development plans that are more sustainable and otherwise enhance conservation initiatives. We analyzed secondary forest and shrubland dynamics over 30 years (1985-2015) in a densely populated area of the Colombian Andes using satellite and biophysical data. We performed a land-cover change analysis, assessed landscape fragmentation, and applied regression models to evaluate the effects of environmental and geographical correlates with the observed forest transitions. Forest cover area increased during the 30 year-span, due mostly to forest regrowth in areas marginal for agriculture, especially during the first half of the study period. However, a high dynamic of both forest regrowth and clearing near urban centers and roads was observed. Soil fertility turned out to be a key correlate of both forest recovery and deforestation. Secondary forests, <30 years old represent the most fragmented component. Our findings reflect the complexity of the processes occurring in highly transformed and densely populated regions. Overall, this study provides elements for a better understanding of the factors driving land cover change near large urban areas, and raises new iideas for further research. © 2017 by the author

    Does greening of neotropical cities considerably mitigate carbon dioxide emissions? The case of Medellin, Colombia

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    Cities throughout the world are advocating highly promoted tree plantings as a climate change mitigation measure. Assessing the carbon offsets associated with urban trees relative to other climate change policies is vital for sustainable development, planning, and solving environmental and socio-economic problems, but is difficult in developing countries. We estimated and assessed carbon dioxide (CO2) storage, sequestration, and emission offsets by public trees in the Medellin Metropolitan Area, Colombia, as a viable Nature-Based Solution for the Neotropics. While previous studies have discussed nature-based solutions and explored urban tree carbon dynamics in high income countries, few have been conducted in tropical cities in low-middle income countries, particularly within South America. We used a public tree inventory for the Metropolitan Area of the Aburrá Valley and an available urban forest functional model, i-Tree Streets, calibrated for Colombia's context. We found that CO2 offsets from public trees were not as effective as cable cars or landfills. However, if available planting spaces are considered, carbon offsets become more competitive with cable cars and other air quality and socio-economic co-benefits are also provided. The use of carbon estimation models and the development of relevant carbon accounting protocols in Neotropical cities are also discussed. Our nature-based solution approach can be used to better guide management of urban forests to mitigate climate change and carbon offset accounting in tropical cities lacking available information. © 2017 by the authors

    The MRX Complex Plays Multiple Functions in Resection of Yku- and Rif2-Protected DNA Ends

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    The ends of both double-strand breaks (DSBs) and telomeres undergo tightly regulated 5′ to 3′ resection. Resection of DNA ends, which is specifically inhibited during the G1 cell cycle phase, requires the MRX complex, Sae2, Sgs1 and Exo1. Moreover, it is negatively regulated by the non-homologous end-joining component Yku and the telomeric protein Rif2. Here, we investigate the nuclease activities that are inhibited at DNA ends by Rif2 and Yku in G1 versus G2 by using an inducible short telomere assay. We show that, in the absence of the protective function of Rif2, resection in G1 depends primarily on MRX nuclease activity and Sae2, whereas Exo1 and Sgs1 bypass the requirement of MRX nuclease activity only if Yku is absent. In contrast, Yku-mediated inhibition is relieved in G2, where resection depends on Mre11 nuclease activity, Exo1 and, to a minor extent, Sgs1. Furthermore, Exo1 compensates for a defective MRX nuclease activity more efficiently in the absence than in the presence of Rif2, suggesting that Rif2 inhibits not only MRX but also Exo1. Notably, the presence of MRX, but not its nuclease activity, is required and sufficient to override Yku-mediated inhibition of Exo1 in G2, whereas it is required but not sufficient in G1. Finally, the integrity of MRX is also necessary to promote Exo1- and Sgs1-dependent resection, possibly by facilitating Exo1 and Sgs1 recruitment to DNA ends. Thus, resection of DNA ends that are protected by Yku and Rif2 involves multiple functions of the MRX complex that do not necessarily require its nuclease activity

    Estimating aboveground biomass and carbon stocks in periurban Andean secondary forests using very high resolution imagery

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    Periurban forests are key to offsetting anthropogenic carbon emissions, but they are under constant threat from urbanization. In particular, secondary Neotropical forest types in Andean periurban areas have a high potential to store carbon, but are currently poorly characterized. To address this lack of information, we developed a method to estimate periurban aboveground biomass (AGB)-a proxy for multiple ecosystem services-of secondary Andean forests near Bogotá, Colombia, based on very high resolution (VHR) GeoEye-1, Pleiades-1A imagery and field-measured plot data. Specifically, we tested a series of different pre-processing workflows to derive six vegetation indices that were regressed against in situ estimates of AGB. Overall, the coupling of linear models and the Ratio Vegetation Index produced the most satisfactory results. Atmospheric and topographic correction proved to be key in improving model fit, especially in high aerosol and rugged terrain such as the Andes. Methods and findings provide baseline AGB and carbon stock information for little studied periurban Andean secondary forests. The methodological approach can also be used for integrating limited forest monitoring plot AGB data with very high resolution imagery for cost-effective modelling of ecosystem service provision from forests, monitoring reforestation and forest cover change, and for carbon offset assessments

    Tendon tissue engineering : An overview of biologics to promote tendon healing and repair

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    Funding Information: The author(s) disclosed receipt of the following financial support for the research, authorship, and/or publication of this article: The authors acknowledge operating grant support from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 955685, www.helsinki.fi/p4fit .Peer reviewedPublisher PD

    Europe's green arteries-A continental dataset of riparian zones

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    Riparian zones represent ecotones between terrestrial and aquatic ecosystems and are of utmost importance to biodiversity and ecosystem functions. Modelling/mapping of these valuable and fragile areas is needed for improved ecosystem management, based on an accounting of changes and on monitoring of their functioning over time. In Europe, the main legislative driver behind this goal is the European Commission's Biodiversity Strategy to 2020, on the one hand aiming at halting biodiversity loss, on the other hand enhancing ecosystem services by 2020, and restoring them as far as is feasible. A model, based on Earth Observation data, including Digital Elevation Models, hydrological, soil, land cover/land use data, and vegetation indices is employed in a multi-modular and stratified approach, based on fuzzy logic and object based image analysis, to delineate potential, observed and actual riparian zones. The approach is designed in an open modular way, allowing future modifications and repeatability. The results represent a first step of a future monitoring and assessment campaign for European riparian zones and their implications on biodiversity and on ecosystem functions and services. Considering the complexity and the enormous extent of the area, covering 39 European countries, including Turkey, the level of detail is unprecedented. Depending on the accounting modus, 0.95%-1.19% of the study area can be attributed as actual riparian area (considering Strahler's stream orders 3-8, based on the Copernicus EU-Hydro dataset), corresponding to 55,558-69,128 km2. Similarly, depending on the accounting approach, the potential riparian zones cover an area about 3-5 times larger. Land cover/land use in detected riparian areas was mainly of semi-natural characteristics, while the potential riparian areas are predominately covered by agriculture, followed by semi-natural and urban areas. © 2016 by the authors

    Endotenon-Derived Type II Tendon Stem Cells Have Enhanced Proliferative and Tenogenic Potential

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    Funding This project received funding from the European Union’s Horizon 2020 Research and Innovation Program under the Marie Skłodowska-Curie grant agreement, No. 955685. This research also received funding support from the Engineering and Physical Sciences Research Council (EPSRC) Centre for Doctoral Training in Regenerative Medicine (EP/L015072/1).Peer reviewedPublisher PD
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