Microscopic Study of 1S0{}^1{S_0} Superfluidity in Dilute Neutron Matter

Singlet $S$-wave superfluidity of dilute neutron matter is studied within the correlated BCS method, which takes into account both pairing and short-range correlations. First, the equation of state (EOS) of normal neutron matter is calculated within the Correlated Basis Function (CBF) method in lowest cluster order using the ${}^1{S_0}$ and ${}^3P$ components of the Argonne $V_{18}$ potential, assuming trial Jastrow-type correlation functions. The ${}^1{S_0}$ superfluid gap is then calculated with the corresponding component of the Argonne $V_{18}$ potential and the optimally determined correlation functions. The dependence of our results on the chosen forms for the correlation functions is studied, and the role of the $P$-wave channel is investigated. Where comparison is meaningful, the values obtained for the ${}^1{S_0}$ gap within this simplified scheme are consistent with the results of similar and more elaborate microscopic methods.Comment: 9 pages, 6 figure

Measuring Coverage of Prolog Programs Using Mutation Testing

Testing is an important aspect in professional software development, both to avoid and identify bugs as well as to increase maintainability. However, increasing the number of tests beyond a reasonable amount hinders development progress. To decide on the completeness of a test suite, many approaches to assert test coverage have been suggested. Yet, frameworks for logic programs remain scarce. In this paper, we introduce a framework for Prolog programs measuring test coverage using mutations. We elaborate the main ideas of mutation testing and transfer them to logic programs. To do so, we discuss the usefulness of different mutations in the context of Prolog and empirically evaluate them in a new mutation testing framework on different examples.Comment: 16 pages, Accepted for presentation in WFLP 201

High efficiency In Vivo genome engineering with a simplified 15-RVD GoldyTALEN design

published_or_final_versio

Quantification of the uncertainties within the radiotherapy dosimetry chain and their impact on tumour control

BACKGROUND AND PURPOSE: Dose delivered during radiotherapy has uncertainty arising from a number of sources including machine calibration, treatment planning and delivery and can impact outcomes. Any systematic uncertainties will impact all patients and can continue for extended periods. The impact on tumour control probability (TCP) of the uncertainties within the radiotherapy calibration process has been assessed. MATERIAL AND METHODS: The linear-quadratic model was used to simulate the TCP from two prostate cancer and a head and neck (H&N) clinical trial. The uncertainty was separated into four components; 1) initial calibration, 2) systematic shift due to output drift, 3) drift during treatment and 4) daily fluctuations. Simulations were performed for each clinical case to model the variation in TCP present at the end of treatment arising from the different components. RESULTS: Overall uncertainty in delivered dose was +/−2.1% (95% confidence interval (CI)), consisting of uncertainty standard deviations of 0.7% in initial calibration, 0.8% due to subsequent calibration shift due to output drift, 0.1% due to drift during treatment, and 0.2% from daily variations. The overall uncertainty of TCP (95% CI) for a population of patients treated on different machines was +/−3%, +/−5%, and +/−3% for simulations based on the two prostate trials and H&N trial respectively. CONCLUSIONS: The greatest variation in delivered target volume dose arose from calibration shift due to output drift. Careful monitoring of beam output following initial calibration remains vital and may have a significant impact on clinical outcomes

Clinical use, challenges, and barriers to implementation of deformable image registration in radiotherapy – the need for guidance and QA tools

OBJECTIVE: The aim of this study was to evaluate the current status of the clinical use of deformable image registration (DIR) in radiotherapy and to gain an understanding of the challenges faced by centres in clinical implementation of DIR, including commissioning and quality assurance (QA), and to determine the barriers faced. The goal was to inform whether additional guidance and QA tools were needed. METHODS: A survey focussed on clinical use, metrics used, how centres would like to use DIR in the future and challenges faced, was designed and sent to 71 radiotherapy centres in the UK. Data were gathered specifically on which centres we using DIR clinically, which applications were being used, what commissioning and QA tests were performed, and what barriers were preventing the integration of DIR into the clinical workflow. Centres that did not use DIR clinically were encouraged to fill in the survey and were asked if they have any future plans and in what timescale. RESULTS: 51 out of 71 (70%) radiotherapy centres responded. 47 centres reported access to a commercial software that could perform DIR. 20 centres already used DIR clinically, and 22 centres had plans to implement an application of DIR within 3 years of the survey. The most common clinical application of DIR was to propagate contours from one scan to another (19 centres). In each of the applications, the types of commissioning and QA tests performed varied depending on the type of application and between centres. Some of the key barriers were determining when a DIR was satisfactory including which metrics to use, and lack of resources. CONCLUSION: The survey results highlighted that there is a need for additional guidelines, training, better tools for commissioning DIR software and for the QA of registration results, which should include developing or recommending which quantitative metrics to use. ADVANCES IN KNOWLEDGE: This survey has given a useful picture of the clinical use and lack of use of DIR in UK radiotherapy centres. The survey provided useful insight into how centres commission and QA DIR applications, especially the variability among centres. It was also possible to highlight key barriers to implementation and determine factors that may help overcome this which include the need for additional guidance specific to different applications, better tools and metrics

Rearrangement of the Fermi Surface of Dense Neutron Matter and Direct Urca Cooling of Neutron Stars

It is proposed that a rearrangement of single-particle degrees of freedom may occur in a portion of the quantum fluid interior of a neutron star. Such a rearrangement is associated with the pronounced softening of the spin-isospin collective mode which, under increasing density, leads to pion condensation. Arguments and estimates based on fundamental relations of many-body theory show that one realization of this phenomenon could produce very rapid cooling of the star via a direct nucelon Urca process displaying a $T^5$ dependence on temperature.Comment: 8 pages, 2 figure

The Effect of the Short-Range Correlations on the Generalized Momentum Distribution in Finite Nuclei

The effect of dynamical short-range correlations on the generalized momentum distribution $n(\vec{p},\vec{Q})$ in the case of $Z=N$, $\ell$-closed shell nuclei is investigated by introducing Jastrow-type correlations in the harmonic-oscillator model. First, a low order approximation is considered and applied to the nucleus $^4$He. Compact analytical expressions are derived and numerical results are presented and the effect of center-of-mass corrections is estimated. Next, an approximation is proposed for $n(\vec{p}, \vec{Q})$ of heavier nuclei, that uses the above correlated $n(\vec{p},\vec{Q})$ of $^4$He. Results are presented for the nucleus $^{16}$O. It is found that the effect of short-range correlations is significant for rather large values of the momenta $p$ and/or $Q$ and should be included, along with center of mass corrections for light nuclei, in a reliable evaluation of $n(\vec{p},\vec{Q})$ in the whole domain of $p$ and $Q$.Comment: 29 pages, 8 figures. Further results, figures and discussion for the CM corrections are added. Accepted by Journal of Physics

Sputter-engineering a first-order magnetic phase transition in sub-15-nm-thick single-crystal FeRh films

Equiatomic FeRh alloys undergo a fascinating first-order metamagnetic phase transition (FOMPT) just above room temperature, which has attracted reinvigorated interest for applications in spintronics. Until now, all attempts to grow nanothin FeRh alloy films have consistently shown that FeRh layers tend to grow in the Volmer-Weber growth mode. Here we show that sputter-grown sub-15-nm-thick FeRh alloy films deposited at low sputter-gas pressure, typically ∼0.1 Pa, onto (001)-oriented MgO substrates, grow in a peening-induced Frank-van der Merwe growth mode for FeRh film thicknesses above 5 nm, circumventing this major drawback. The bombardment of high-energy sputtered atoms, the atom-peening effect, induces a rebalancing between adsorbate-surface and adsorbate-adsorbate interactions, leading to the formation of a smooth continuous nanothin FeRh film. Chemical order in the films increases with the FeRh thickness, tFeRh, and varies monotonically from 0.75 up to 0.9. Specular x-ray diffraction scans around Bragg peaks show Pendellösung fringes for films with tFeRh≥5.2 nm, which reflects in smooth well-ordered densified single-crystal FeRh layers. The nanothin film's roughness varies from 0.6 down to about 0.1 nm as tFeRh increases, and scales linearly with the integral breadth of the rocking curve, proving its microstructured origin. Magnetometry shows that the FOMPT in the nanothin films is qualitatively similar to that of the bulk alloy, except for the thinnest film of 3.7 nm

Bounds on Dark Matter from the ``Atmospheric Neutrino Anomaly''

Bounds are derived on the cross section, flux and energy density of new particles that may be responsible for the atmospheric neutrino anomaly. $4.6 \times 10^{-45} cm^2 < \sigma <2.4 \times 10^{-34} cm^2$ Decay of primordial homogeneous dark matter can be excluded.Comment: 10 pages, TeX (revtex

Waiting times between orders and trades in double-auction markets

In this paper, the survival function of waiting times between orders and the corresponding trades in a double-auction market is studied both by means of experiments and of empirical data. It turns out that, already at the level of order durations, the survival function cannot be represented by a single exponential, thus ruling out the hypothesis of constant activity during trading. This fact has direct consequences for market microstructural models. They must include such a non-exponential behaviour to be realistic.Comment: 19 pages, 3 figures, paper presented at the WEHIA 2005, Colchester, U