Discovery and mapping of the Triton seep site, Redondo Knoll: fluid flow and microbial colonization within an oxygen minimum zone

© The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wagner, J. K. S., Smart, C., & German, C. R. Discovery and mapping of the Triton seep site, Redondo Knoll: fluid flow and microbial colonization within an oxygen minimum zone. Frontiers in Marine Science, 7, (2020): 108, doi:10.3389/fmars.2020.00108.This paper examines a deep-water (∼900 m) cold-seep discovered in a low oxygen environment ∼30 km off the California coast in 2015 during an E/V Nautilus telepresence-enabled cruise. This Triton site was initially detected from bubble flares identified via shipboard multibeam sonar and was then confirmed visually using the remotely operated vehicle (ROV) Hercules. High resolution mapping (to 1 cm resolution) and co-registered imaging has provided us with a comprehensive site overview – both of the geologic setting and the extent of the associated microbial colonization. The Triton site represents an active cold-seep where microorganisms can act as primary producers at the base of a chemosynthesis-driven food chain. But it is also located near the core of a local oxygen minimum zone (OMZ), averaging 100 m across the seafloor, dominate the site, while typical seep-endemic macro-fauna were noticeably absent from our co-registered photographic and high-resolution mapping surveys – especially when compared to all adjacent seep sites within the same California Borderlands region. While such absences of abundant macro-fauna could be attributable to variations in the availability of dissolved oxygen in the overlying water column this need not necessarily be the case. An alternate possibility is that the zonation in microbial activity that is readily observable at the seafloor at Triton reflects, instead, a concentric pattern of radially diminishing fluxes of reductants from the underlying seafloor. This unusual but readily accessible discovery, in close proximity to Los Angeles harbor, provides an intriguing new natural laboratory at which to examine biogeochemical and microbiological interactions associated with the functioning of cold seep ecosystems within an OMZ.Ship time was funded by NOAA – Office of Exploration and Research and the Ocean Exploration Trust. This material is based upon work supported by a National Science Foundation Graduate Research Fellowship (to JW), the Office of Naval Research (to CS), and NASA’s Astrobiology program (to CG)

Disparities in Cause-Specific Cancer Survival by Census Tract Poverty Level in Idaho, U.S.

Objective. This population-based study compared cause-specific cancer survival by socioeconomic status using methods to more accurately assign cancer deaths to primary site. Methods. The current study analyzed Idaho data used in the Accuracy of Cancer Mortality Statistics Based on Death Certificates (ACM) study supplemented with additional information to measure cause-specific cancer survival by census tract poverty level. Results. The distribution of cases by primary site group differed significantly by poverty level (chi-square = 265.3, 100 df, p In the life table analyses, for 8 of 24 primary site groups investigated, and all sites combined, there was a significant gradient relating higher poverty with poorer survival. For all sites combined, the absolute difference in 5-year cause-specific survival rate was 13.6% between the lowest and highest poverty levels. Conclusions. This study shows striking disparities in cause-specific cancer survival related to the poverty level of the area a person resides in at the time of diagnosis

Hydrothermal plume detection dataset from Chinese cruises to the equatorial East Pacific Rise

© The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Chen, S., Tao, C., & German, C. R. . Hydrothermal plume detection dataset from Chinese cruises to the equatorial East Pacific Rise. Data in Brief, 33, (2020): 106540, doi:10.1016/j.dib.2020.106540.In this data article, a dataset from hydrothermal plume investigations on East Pacific Rise collected during Chinese cruises from 2008 to 2011 is reported. The dataset is related to the research article entitled “Abundance of low-temperature axial venting at the equatorial East Pacific Rise” published in the journal Deep-Sea Research I by Chen et al. (2020). In the dataset, continuous strings of time-series sensor data were obtained by Miniature Autonomous Plume Recorders (MAPR) and an Oxidation-Reduction Potential (ORP) sensor, while the underwater position data was derived using Ultra Short Base Line (USBL) navigation. In this contribution, general characteristics of the data are summarized and showed here. All the data are stored in separate Microsoft Excel spreadsheets that are available for researchers and a link is provided to the full data at http://dx.doi.org/10.17632/jckyj5vyjx.1. The data will be of comparative value to those investigating hydrothermal activities along mid-ocean ridges, worldwide.We acknowledge the science parties and crew of Dayang YiHao expedition DY17 in 2005, DY20 in 2008, DY21 in 2009 and DY22 in 2011 for data collection. Fieldwork for this study was funded by National Key Research and Development Program of China (2018YFC0309901), China Ocean Mineral Resources R & D Association (COMRA) Project (DY135-S1-1-01, 02, 09) and Natural Science Foundation of Zhejiang Province (LQ19D060008). SC recognizes financial support from China Scholarship Council which supported her visit to WHOI where the data analysis for this paper occurred (201808330070); CG recognizes financial support from US National Science Foundation grant OCE-1755571 and from WHOI. We are grateful to the contributions made by Guanghai Wu, Yongshun John Chen, Jianyu Ni, Jian Lin, Xin Su, Jianping Zhou and Yuan Wang - both for overseeing the cruises during which the ORP and MAPR sensor data reported here were collected but also for their thoughtful suggestions during those cruises

Investigation of extractable organic compounds in deep-sea hydrothermal vent fluids along the Mid-Atlantic Ridge

Author Posting. © The Author(s), 2015. This is the author's version of the work. It is posted here by permission of Elsevier for personal use, not for redistribution. The definitive version was published in Geochimica et Cosmochimica Acta 156 (2015): 122-144, doi:10.1016/j.gca.2015.02.022.The possibility that deep-sea hydrothermal vents may contain organic compounds produced by abiotic synthesis or by microbial communities living deep beneath the surface has led to numerous studies of the organic composition of vent fluids. Most of these studies have focused on methane and other light hydrocarbons, while the possible occurrence of more complex organic compounds in the fluids has remained largely unstudied. To address this issue, the presence of higher molecular weight organic compounds in deep-sea hydrothermal fluids was assessed at three sites along the Mid-Atlantic Ridge that span a range of temperatures (51 to >360 °C), fluid compositions, and host-rock lithologies (mafic to ultramafic). Sample were obtained at several sites within the Lucky Strike, Rainbow, and Lost City hydrothermal fields. Three methods were employed to extract organic compounds for analysis, including liquid:liquid extraction, cold trapping on the walls of a coil of titanium tubing, and pumping fluids through cartridges filled with solid phase extraction (SPE) sorbents. The only samples to consistently yield high amounts of extractable organic compounds were the warm (51-91 °C), highly alkaline fluids from Lost City, which contained elevated concentrations of C8, C10, and C12 n-alkanoic acids and, in some cases, trithiolane, hexadecanol, squalene, and cholesterol. Collectively, the C8-C12 acids can account for about 15% of the total dissolved organic carbon in the Lost City fluids. The even-carbon-number predominance of the alkanoic acids indicates a biological origin, but it is unclear whether these compounds are derived from microbial activity occurring within the hydrothermal chimney proximal to the site of fluid discharge or are transported from deeper within the system. Hydrothermal fluids from the Lucky Strike and Rainbow fields were characterized by an overall scarcity of extractable dissolved organic compounds. Trace amounts of aromatic hydrocarbons including phenanthrenes and benzothiophene were the only compounds that could be identified as indigenous components of these fluids. Although hydrocarbons and fatty acids were observed in some samples, those compounds were likely derived from particulate matter or biomass entrained during fluid collection. In addition, extracts of some fluid samples from the Rainbow field were found to contain an unresolved complex mixture (UCM) of organic compounds. This UCM shared some characteristics with organic matter extracted from bottom seawater, suggesting that the organic matter observed in these samples might represent seawater-derived compounds that had persisted, albeit with partial alteration, during circulation through the hydrothermal system. While there is considerable evidence that Rainbow and Lost City vent fluids contain methane and other light hydrocarbons produced through abiotic reduction of inorganic carbon, we found no evidence for more complex organic compounds with an abiotic origin in the same fluids.This research was supported by the NSF Ocean Sciences directorate through grants MGG-OCE 0550800 to T.M.M. and MGG-OCE 0549829 to J.S.S. and C.R.G

An authoritative global database for active submarine hydrothermal vent fields

Author Posting. © American Geophysical Union, 2013. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry, Geophysics, Geosystems 14 (2013): 4892–4905, doi:10.1002/2013GC004998.The InterRidge Vents Database is available online as the authoritative reference for locations of active submarine hydrothermal vent fields. Here we describe the revision of the database to an open source content management system and conduct a meta-analysis of the global distribution of known active vent fields. The number of known active vent fields has almost doubled in the past decade (521 as of year 2009), with about half visually confirmed and others inferred active from physical and chemical clues. Although previously known mainly from mid-ocean ridges (MORs), active vent fields at MORs now comprise only half of the total known, with about a quarter each now known at volcanic arcs and back-arc spreading centers. Discoveries in arc and back-arc settings resulted in an increase in known vent fields within exclusive economic zones, consequently reducing the proportion known in high seas to one third. The increase in known vent fields reflects a number of factors, including increased national and commercial interests in seafloor hydrothermal deposits as mineral resources. The purpose of the database now extends beyond academic research and education and into marine policy and management, with at least 18% of known vent fields in areas granted or pending applications for mineral prospecting and 8% in marine protected areas.For support to prepare this manuscript, we thank the National Science Foundation (OCE08-38923, GeoEd12-02977), the NOAA Vents (now Earth-Ocean Interactions) Program and the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) under NOAA Cooperative Agreement NA10OAR4320148, and WHOI.2014-05-1

Dispersion of deep-sea hydrothermal plumes at the Endeavour Segment of the Juan de Fuca Ridge: a multiscale numerical study

A multiscale numerical framework has been developed to investigate the dispersion of deep-sea hydrothermal plumes that originate from the Endeavour Segment of the Juan de Fuca Ridge located in the Northeast Pacific. The analysis of simulation outputs presented in this study provides insights into the influences of tidal forcing and the buoyancy flux associated with hydrothermal venting on ocean circulation and plume dispersion in the presence of pronounced seafloor topography. The results indicate that tidal forcing drives anti-cyclonic circulation near the ridge-axis, while hydrothermal venting induces cyclonic circulation around vent fields within the axial rift valley. Tidal forcing has a notable impact on plume dispersion, particularly near the large topographic features to the north of the Endeavour Segment. Furthermore, plume dispersion exhibits notable inter-annual variability, with a northbound trajectory in 2016 and a southbound trajectory in 2021. The study also reveals that both buoyancy fluxes and tidal forcing enhance the mixing of hydrothermal plumes with ambient seawater

Axial morphology along the Southern Chile Rise

Author Posting. © The Author(s), 2012. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Marine Geology 315-318 (2012): 58-63, doi:10.1016/j.margeo.2012.06.001.Morphology of four spreading segments on the southern Chile Rise is described based on multi-beam bathymetric data collected along the axial zones. The distribution of axial volcanoes, the character of rift valley scarps, and the average depths vary between Segment 1 in the south, terminating at the Chile Triple Junction, and Segment 4 in the north, which are separated by three intervening transform faults. Despite this general variability, there is a consistent pattern of clockwise rotation of the southern-most axial volcanic ridge within each of Segments 2, 3, and 4, relative to the overall trend of the rift valley. A combination of local ridge-transform intersection stresses and regional tectonics may influence spreading axis evolution in this sense.This work was supported by NOAA/OE grant NA08OAR4600757 and University of California Ship Funds

Abiotic redox reactions in hydrothermal mixing zones: decreased energy availability for the subsurface biosphere

© The Author(s), 202. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in McDermott, J. M., Sylva, S. P., Ono, S., German, C. R., & Seewald, J. S. Abiotic redox reactions in hydrothermal mixing zones: decreased energy availability for the subsurface biosphere. Proceedings of the National Academy of Sciences of the United States of America, 117(34), (2020): 20453-20461, doi:10.1073/pnas.2003108117.Subseafloor mixing of high-temperature hot-spring fluids with cold seawater creates intermediate-temperature diffuse fluids that are replete with potential chemical energy. This energy can be harnessed by a chemosynthetic biosphere that permeates hydrothermal regions on Earth. Shifts in the abundance of redox-reactive species in diffuse fluids are often interpreted to reflect the direct influence of subseafloor microbial activity on fluid geochemical budgets. Here, we examine hydrothermal fluids venting at 44 to 149 °C at the Piccard hydrothermal field that span the canonical 122 °C limit to life, and thus provide a rare opportunity to study the transition between habitable and uninhabitable environments. In contrast with previous studies, we show that hydrocarbons are contributed by biomass pyrolysis, while abiotic sulfate (SO42−) reduction produces large depletions in H2. The latter process consumes energy that could otherwise support key metabolic strategies employed by the subseafloor biosphere. Available Gibbs free energy is reduced by 71 to 86% across the habitable temperature range for both hydrogenotrophic SO42− reduction to hydrogen sulfide (H2S) and carbon dioxide (CO2) reduction to methane (CH4). The abiotic H2 sink we identify has implications for the productivity of subseafloor microbial ecosystems and is an important process to consider within models of H2 production and consumption in young oceanic crust.Financial support was provided by the National Aeronautics and Space Administration (NASA) Astrobiology program (Awards NNX09AB75G and 80NSSC19K1427 to C.R.G. and J.S.S.) and the NSF (Award OCE-1061863 to C.R.G. and J.S.S.). Ship and vehicle time for cruise FK008 was provided by the Schmidt Ocean Institute. We thank the ROV Jason II and HROV Nereus groups, and the captain, officers, and crew of R/V Atlantis (AT18-16) and R/V Falkor (FK008) for their dedication to skillful operations at sea. We thank our scientific colleagues from both cruises, as well as Meg Tivey, Frieder Klein, and Scott Wankel for insightful discussions. We are grateful to the editor and two anonymous reviewers for providing helpful comments and suggestions

Time-series analysis of two hydrothermal plumes at 9°50′N East Pacific Rise reveals distinct, heterogeneous bacterial populations

Author Posting. © The Author(s), 2011. This is the author's version of the work. It is posted here by permission of John Wiley & Sons for personal use, not for redistribution. The definitive version was published in Geobiology 10 (2012): 178-192, doi:10.1111/j.1472-4669.2011.00315.xWe deployed sediment traps adjacent to two active hydrothermal vents at 9°50’N on the East Pacific Rise (EPR) to assess variability in bacterial community structure associated with plume particles on the time scale of weeks to months, to determine if an endemic population of plume microbes exists, and to establish ecological relationships between bacterial populations and vent chemistry. Automated rRNA intergenic spacer analysis (ARISA) indicated there are separate communities at the two different vents and temporal community variations between each vent. Correlation analysis between chemistry and microbiology indicated that shifts in the coarse particulate (>1 mm) Fe/(Fe+Mn+Al), Cu, V, Ca, Al, 232Th, and Ti as well as fine-grained particulate (<1 mm) Fe/(Fe+Mn+Al), Fe, Ca and Co are reflected in shifts in microbial populations. 16S rRNA clone libraries from each trap at three time points revealed a high percentage of Epsilonproteobacteria clones and hyperthermophilic Aquificae. There is a shift towards the end of the experiment to more Gammaproteobacteria and Alphaproteobacteria, many of whom likely participate in Fe and S cycling. The particle attached plume environment is genetically distinct from the surrounding seawater. While work to date in hydrothermal environments has focused on determining the microbial communities on hydrothermal chimneys and the basaltic lavas that form the surrounding seafloor, little comparable data exists on the plume environment that physically and chemically connects them. By employing sediment traps for a time series approach to sampling, we show that bacterial community composition on plume particles changes on time scales much shorter than previously known.This work was supported by the NSF Marine Geology and Geophysics program, the Science and Technology program, and the Gordon and Betty Moore Foundation

Deep-water chemosynthetic ecosystem research during the Census of Marine Life Decade and Beyond: A Proposed Deep-Ocean Road Map

The ChEss project of the Census of Marine Life (2002–2010) helped foster internationally-coordinated studies worldwide focusing on exploration for, and characterization of new deep-sea chemosynthetic ecosystem sites. This work has advanced our understanding of the nature and factors controlling the biogeography and biodiversity of these ecosystems in four geographic locations: the Atlantic Equatorial Belt (AEB), the New Zealand region, the Arctic and Antarctic and the SE Pacific off Chile. In the AEB, major discoveries include hydrothermal seeps on the Costa Rica margin, deepest vents found on the Mid-Cayman Rise and the hottest vents found on the Southern Mid-Atlantic Ridge. It was also shown that the major fracture zones on the MAR do not create barriers for the dispersal but may act as trans-Atlantic conduits for larvae. In New Zealand, investigations of a newly found large cold-seep area suggest that this region may be a new biogeographic province. In the Arctic, the newly discovered sites on the Mohns Ridge (71°N) showed extensive mats of sulfur-oxidisng bacteria, but only one gastropod potentially bears chemosynthetic symbionts, while cold seeps on the Haakon Mossby Mud Volcano (72°N) are dominated by siboglinid worms. In the Antarctic region, the first hydrothermal vents south of the Polar Front were located and biological results indicate that they may represent a new biogeographic province. The recent exploration of the South Pacific region has provided evidence for a sediment hosted hydrothermal source near a methane-rich cold-seep area. Based on our 8 years of investigations of deep-water chemosynthetic ecosystems worldwide, we suggest highest priorities for future research: (i) continued exploration of the deep-ocean ridge-crest; (ii) increased focus on anthropogenic impacts; (iii) concerted effort to coordinate a major investigation of the deep South Pacific Ocean – the largest contiguous habitat for life within Earth's biosphere, but also the world's least investigated deep-ocean basin