1,039 research outputs found
Exact ground states and correlation functions of chain and ladder models of interacting hardcore bosons or spinless fermions
By removing one empty site between two occupied sites, we map the ground
states of chains of hardcore bosons and spinless fermions with infinite
nearest-neighbor repulsion to ground states of chains of hardcore bosons and
spinless fermions without nearest-neighbor repulsion respectively, and
ultimately in terms of the one-dimensional Fermi sea. We then introduce the
intervening-particle expansion, where we write correlation functions in such
ground states as a systematic sum over conditional expectations, each of which
can be ultimately mapped to a one-dimensional Fermi-sea expectation. Various
ground-state correlation functions are calculated for the bosonic and fermionic
chains with infinite nearest-neighbor repulsion, as well as for a ladder model
of spinless fermions with infinite nearest-neighbor repulsion and correlated
hopping in three limiting cases. We find that the decay of these correlation
functions are governed by surprising power-law exponents.Comment: 20 pages, 18 figures, RevTeX4 clas
State-space solutions to the dynamic magnetoencephalography inverse problem using high performance computing
Determining the magnitude and location of neural sources within the brain
that are responsible for generating magnetoencephalography (MEG) signals
measured on the surface of the head is a challenging problem in functional
neuroimaging. The number of potential sources within the brain exceeds by an
order of magnitude the number of recording sites. As a consequence, the
estimates for the magnitude and location of the neural sources will be
ill-conditioned because of the underdetermined nature of the problem. One
well-known technique designed to address this imbalance is the minimum norm
estimator (MNE). This approach imposes an regularization constraint that
serves to stabilize and condition the source parameter estimates. However,
these classes of regularizer are static in time and do not consider the
temporal constraints inherent to the biophysics of the MEG experiment. In this
paper we propose a dynamic state-space model that accounts for both spatial and
temporal correlations within and across candidate intracortical sources. In our
model, the observation model is derived from the steady-state solution to
Maxwell's equations while the latent model representing neural dynamics is
given by a random walk process.Comment: Published in at http://dx.doi.org/10.1214/11-AOAS483 the Annals of
Applied Statistics (http://www.imstat.org/aoas/) by the Institute of
Mathematical Statistics (http://www.imstat.org
Comparison of Four Commercially Available Group B Streptococcus Molecular Assays Using Remnant Rectal-Vaginal Enrichment Broths
The incidence of neonatal Group B streptococcal (GBS) disease has significantly declined since the widespread implementation of prenatal screening of expectant mothers for urogenital and gastrointestinal tract GBS colonization. Screening methods have evolved from exclusively culture-based approaches to more rapid and highly sensitive molecular methods. We chose to evaluate the performance of four commercially available GBS molecular tests for detection of GBS colonization using 299 antepartum rectal-vaginal specimens submitted to our laboratory for routine GBS screening. In 97% of instances, there was agreement between all three systems. When testing 1, 6, and 12 samples simultaneously, all methods performed comparably, but the ARIES® GBS assay required the least total hands-on time and the illumigene® Group B Streptococcus assay required the most hands-on time
Susceptibility Provision Enhances Effective De-escalation (SPEED): utilizing rapid phenotypic susceptibility testing in Gram-negative bloodstream infections and its potential clinical impact
Abstract
Objectives
We evaluated the performance and time to result for pathogen identification (ID) and antimicrobial susceptibility testing (AST) of the Accelerate Phenoâ„¢ system (AXDX) compared with standard of care (SOC) methods. We also assessed the hypothetical improvement in antibiotic utilization if AXDX had been implemented.
Methods
Clinical samples from patients with monomicrobial Gram-negative bacteraemia were tested and compared between AXDX and the SOC methods of the VERIGENE® and Bruker MALDI Biotyper® systems for ID and the VITEK® 2 system for AST. Additionally, charts were reviewed to calculate theoretical times to antibiotic de-escalation, escalation and active and optimal therapy
Results
ID mean time was 21 h for MALDI-TOF MS, 4.4 h for VERIGENE® and 3.7 h for AXDX. AST mean time was 35 h for VITEK® 2 and 9.0 h for AXDX. For ID, positive percentage agreement was 95.9% and negative percentage agreement was 99.9%. For AST, essential agreement was 94.5% and categorical agreement was 93.5%. If AXDX results had been available to inform patient care, 25% of patients could have been put on active therapy sooner, while 78% of patients who had therapy optimized during hospitalization could have had therapy optimized sooner. Additionally, AXDX could have reduced time to de-escalation (16 versus 31 h) and escalation (19 versus 31 h) compared with SOC.
Conclusions
By providing fast and reliable ID and AST results, AXDX has the potential to improve antimicrobial utilization and enhance antimicrobial stewardship
Geochronology of the middle Eocene Purple Bench locality (Devil’s Graveyard Formation), Trans-Pecos Texas, USA
Purple Bench is a middle Eocene fossil locality in the Devil’s Graveyard Formation of the Trans-Pecos region of West Texas. In addition to yielding a range of taxa characteristic of the Uintan North American Land Mammal Age, the Purple Bench locality is noteworthy in documenting a number of endemic species that are known only from the site. Despite the Uintan character of the mammalian fauna, the absolute age of Purple Bench is a matter of debate. This uncertainty stems from the wide interval of time encompassed by current radiometric dates bracketing the Purple Bench locality and from conflicting magnetostratigraphic correlations in the Devil’s Graveyard Formation. This study constrains the absolute age of the Purple Bench locality through detrital zircon U-Pb geochronological analyses. For these analyses, 147 new detrital zircon U-Pb ages were collected from five tuffaceous sandstones and reworked tuff horizons and analyzed via Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICPMS). These new detrital zircon U-Pb geochronological analyses suggest a maximum depositional age of 43.7 +0.8 / -0.2 Ma for the Purple Bench tuff, a significant marker horizon immediately below the Purple Bench locality. These new maximum depositional age dates presented here provide constraints on the true depositional age of the lower and middle members of the Devil’s Graveyard Formation, bringing clarity to the previously ambiguous age of the fossil-bearing Purple Bench locality. The age constraints presented here also aid the characterization of the temporally and spatially variable Uintan North American Land Mammal Age
Resistant starch and protein intake enhances fat oxidation and feelings of fullness in lean and overweight/obese women
BACKGROUND: Diets high in either resistant starch or protein have been shown to aid in weight management. We examined the effects of meals high in non-resistant or resistant starch with and without elevated protein intake on substrate utilization, energy expenditure, and satiety in lean and overweight/obese women. METHODS: Women of varying levels of adiposity consumed one of four pancake test meals in a single-blind, randomized crossover design: 1) waxy maize (control) starch (WMS); 2) waxy maize starch and whey protein (WMS+WP); 3) resistant starch (RS); or 4) RS and whey protein (RS+WP). RESULTS: Total post-prandial energy expenditure did not differ following any of the four test meals (WMS = 197.9 ± 8.9; WMS+WP = 188 ± 8.1; RS = 191.9 ± 8.9; RS+WP = 195.8 ± 8.7, kcals/180 min), although the combination of RS+WP, but not either intervention alone, significantly increased (P <0.01) fat oxidation (WMS = 89.5 ± 5.4; WMS+WP = 84.5 ± 7.2; RS = 97.4 ± 5.4; RS+WP = 107.8 ± 5.4, kcals/180 min). Measures of fullness increased (125 % vs. 45 %) and hunger decreased (55 % vs. 16 %) following WP supplemented versus non-whey conditions (WMS+WP, RS+WP vs. WMS, RS), whereas circulating hunger and satiety factors were not different among any of the test meals. However, peptide YY (PYY) was significantly elevated at 180 min following RS+WP meal. CONCLUSIONS: The combined consumption of dietary resistant starch and protein increases fat oxidation, PYY, and enhances feelings of satiety and fullness to levels that may be clinically relevant if maintained under chronic conditions. This trial was registered at clinicaltrials.gov as NCT02418429
Political Influence Associates With Cortisol and Health Among Egalitarian Forager-Farmers
Background and objectives: Low social status increases risk of disease due, in part, to the psychosocial stress that accompanies feeling subordinate or poor. Previous studies report that chronic stress and chronically elevated cortisol can impair cardiovascular and immune function. We test whether lower status is more benign in small-scale, relatively egalitarian societies, where leaders lack coercive authority and there is minimal material wealth to contest.
Methodology: Among Tsimane’ forager-horticulturalists of lowland Bolivia, we compare informal political influence among men with urinary cortisol, immune activation (innate and acquired), and morbidity as assessed during routine medical exams.
Results: After controlling for potential confounds, we find that politically influential men have lower cortisol, and that this association is partly attributable to access to social support. Cortisol is positively associated with men’s income, which may reflect chronic psychosocial stress from market involvement. Greater influence is also associated with lower probability of respiratory infection, which is a frequent source of morbidity among Tsimane’. Among men who lost influence over a 4-year period, cortisol and probability of respiratory infection were higher the greater the decline in influence.
Conclusions and implications: Deleterious effects of low status on health are not merely ‘diseases of civilization’ but may result from how (even subtle) status differences structure human behavior
FcγRIIIa Expression on Monocytes in Rheumatoid Arthritis: Role in Immune-Complex Stimulated TNF Production and Non-Response to Methotrexate Therapy
OBJECTIVE:The expression of FcγRIIIa/CD16 may render monocytes targets for activation by IgG-containing immune complexes (IC). We investigated whether FcγRIIIa/CD16 was upregulated in rheumatoid arthritis (RA), associated with TNF production in response to IC-stimulation, and if this predicted response to methotrexate therapy. METHODS:FcγRIIIa/CD16 expression on CD14(low) and CD14++ monocytes was measured by flow cytometry in healthy controls and RA patients (early and long-standing disease). Intracellular TNF-staining was carried out after in vitro LPS or heat-aggregated immunoglobulin (HAG) activation. FcγRIIIa/CD16 expression pre- and post-steroid/methotrexate treatment was examined. RESULTS:Increased FcγRIIIa/CD16 expression on CD14++ monocytes in long-standing RA patients compared to controls was demonstrated (p = 0.002) with intermediate levels in early-RA patients. HAG-induced TNF-production in RA patients was correlated with the percentage of CD14++ monocytes expressing FcγRIIIa/CD16 (p<0.001). The percentage of CD14++ monocytes expressing FcγRIIIa/CD16 at baseline in early DMARD-naïve RA patients was negatively correlated with DAS28-ESR improvement 14-weeks post-methotrexate therapy (p = 0.003) and was significantly increased in EULAR non-responders compared to moderate (p = 0.01) or good responders (p = 0.003). FcγRIIIa/CD16 expression was not correlated with age, presence of systemic inflammation or autoantibody titers. CONCLUSION:Increased FcγRIIIa/CD16 expression on CD14++ monocytes in RA may result in a cell that has increased responsiveness to IC-stimulation. This monocyte subset may contribute to non-response to methotrexate therapy
Direct antimicrobial susceptibility testing of positive blood cultures: A comparison of the accelerate Pheno™ and VITEK® 2 systems
Objectives
To compare the performance and time-to-result (TTR) for antimicrobial susceptibility testing (AST) of positive blood cultures (PBC) using the Accelerate Pheno™ system (AXDX) and both a direct VITEK® 2 card inoculation workflow (DV2) and traditional FDA-approved VITEK® 2 workflow using subcultured isolates (V2).
Methods
Patient samples with monomicrobial Gram-negative rod bacteremia were tested on AXDX and DV2 in tandem, and compared to V2 AST results. Categorical agreement (CA) errors were adjudicated using broth microdilution. Instrumentation times and AST TTR were compared.
Results
AXDX and DV2 had a CA of 91.5% and 97.4%, respectively, compared to V2. Post-adjudication, AXDX, DV2, and V2 had CA of 94.7%, 95.7% and 96.5%, respectively. Instrument run times were 6.6 h, 9.4 h, and 9.2 h, and AST TTR were 8.9 h, 12.9 h and 35.5 h, respectively.
Conclusions
AXDX and DV2 AST is fast and reliable, which may have significant antimicrobial stewardship implications
Laboratory experiments on eddy generation by a buoyant coastal current flowing over variable bathymetry
Author Posting. © American Meteorological Society, 2006. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 36 (2006): 395-411, doi:10.1175/JPO2857.1.Irminger rings are warm-core eddies formed off the west coast of Greenland. Recent studies suggest that these eddies, which are implicated in the rapid springtime restratification of the Labrador Sea, are formed by an internal instability of the West Greenland Current (WGC), triggered by bathymetric variations. This study seeks to explore the effect of the magnitude and downstream length scale of bathymetric variations on the stability of a simple model of the WGC in a series of laboratory experiments in which a buoyant coastal current was allowed to flow over bathymetry consisting of piecewise constant slopes of varying magnitude. The currents did not form eddies over gently sloping bathymetry and only formed eddies over steep bathymetry if the current width exceeded the width of the sloping bathymetry. Eddying currents were immediately stabilized if they flowed onto gently sloping topography. Bathymetric variations that persisted only a short distance downstream perturbed the flow locally but did not lead to eddy formation. Eddies formed only once the downstream length of the bathymetric variations exceeded a critical scale of about 8 Rossby radii. These results are consistent with the observed behavior of the WGC, which begins to form Irminger rings after entering a region where the continental slope abruptly steepens and becomes narrower than the WGC itself in a region spanning about 20–80 Rossby radii of downstream distance.The authors gratefully acknowledge
the National Science Foundation (Grant OCE-
9810657) and the Office of Naval Research (Grant
N00014-97-1-0934) for their support of the 2003 WHOI
Geophysical Fluid Dynamics Summer School where
much of the research presented in this paper was performed.
CLW received additional support from the Office
of Naval Research Grant N00014-98-1-0813
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