Quantifying Inter- and Intra-Population Niche Variability Using Hierarchical Bayesian Stable Isotope Mixing Models

Variability in resource use defines the width of a trophic niche occupied by a population. Intra-population variability in resource use may occur across hierarchical levels of population structure from individuals to subpopulations. Understanding how levels of population organization contribute to population niche width is critical to ecology and evolution. Here we describe a hierarchical stable isotope mixing model that can simultaneously estimate both the prey composition of a consumer diet and the diet variability among individuals and across levels of population organization. By explicitly estimating variance components for multiple scales, the model can deconstruct the niche width of a consumer population into relevant levels of population structure. We apply this new approach to stable isotope data from a population of gray wolves from coastal British Columbia, and show support for extensive intra-population niche variability among individuals, social groups, and geographically isolated subpopulations. The analytic method we describe improves mixing models by accounting for diet variability, and improves isotope niche width analysis by quantitatively assessing the contribution of levels of organization to the niche width of a population

Effect of a tart cherry juice supplement on arterial stiffness and inflammation in healthy adults: a randomised controlled trial.

Tart cherries are a particularly rich source of anthocyanins. Evidence indicates that dietary intake of anthocyanins is inversely associated with arterial stiffness. We conducted an open-label randomised placebo controlled study to determine whether a tart cherry juice concentrate (Cherry Active®) reduced arterial stiffness, inflammation and risk markers for cardiovascular disease in 47 healthy adults (30 – 50 y). Participants consumed 30 ml of cherry concentrate diluted to a volume of 250 ml with water or the same volume of an energy matched control drink daily for 6 weeks. Measurements were taken at baseline and at the end of the intervention. There was no effect of the intervention on arterial stiffness (P=0.218), c-reactive protein (P=0.220), systolic blood pressure (P=0.163), diastolic blood pressure (P=0.121), total cholesterol (P=0.342) and high density lipoprotein cholesterol (P=0.127). At the end of the intervention, plasma antioxidant capacity (measured as the ferric reducing ability of plasma (FRAP) was significantly higher in the intervention group than the control group (P=0.012). We conclude that a tart cherry juice concentrate rich in anthocyanins has no effect on arterial stiffness, c-reactive protein and risk markers for cardiovascular disease, but evokes a minor increase in antioxidant status in healthy adults

Divergences in Real-Time Classical Field Theories at Non-Zero Temperature

The classical approximation provides a non-perturbative approach to time-dependent problems in finite temperature field theory. We study the divergences in hot classical field theory perturbatively. At one-loop, we show that the linear divergences are completely determined by the classical equivalent of the hard thermal loops in hot quantum field theories, and that logarithmic divergences are absent. To deal with higher-loop diagrams, we present a general argument that the superficial degree of divergence of classical vertex functions decreases by one with each additional loop: one-loop contributions are superficially linearly divergent, two-loop contributions are superficially logarithmically divergent, and three- and higher-loop contributions are superficially finite. We verify this for two-loop SU(N) self-energy diagrams in Feynman and Coulomb gauges. We argue that hot, classical scalar field theory may be completely renormalized by local (mass) counterterms, and discuss renormalization of SU(N) gauge theories.Comment: 31 pages with 7 eps figure

The role of head and neck cancer advocacy organizations during the COVID-19 pandemic

The COVID‐19 pandemic has had a significant impact on many aspects of head and neck cancer (HNC) care. The uncertainty and stress resulting from these changes has led many patients and caregivers to turn to HNC advocacy groups for guidance and support. Here we outline some of the issues being faced by patients with HNC during the current crisis and provide examples of programs being developed by advocacy groups to address them. We also highlight the increased utilization of these organizations that has been observed as well as some of the challenges being faced by these not‐for‐profit groups as they work to serve the head and neck community

Bohrification of operator algebras and quantum logic

Following Birkhoff and von Neumann, quantum logic has traditionally been based on the lattice of closed linear subspaces of some Hilbert space, or, more generally, on the lattice of projections in a von Neumann algebra A. Unfortunately, the logical interpretation of these lattices is impaired by their nondistributivity and by various other problems. We show that a possible resolution of these difficulties, suggested by the ideas of Bohr, emerges if instead of single projections one considers elementary propositions to be families of projections indexed by a partially ordered set C(A) of appropriate commutative subalgebras of A. In fact, to achieve both maximal generality and ease of use within topos theory, we assume that A is a so-called Rickart C*-algebra and that C(A) consists of all unital commutative Rickart C*-subalgebras of A. Such families of projections form a Heyting algebra in a natural way, so that the associated propositional logic is intuitionistic: distributivity is recovered at the expense of the law of the excluded middle. Subsequently, generalizing an earlier computation for n-by-n matrices, we prove that the Heyting algebra thus associated to A arises as a basis for the internal Gelfand spectrum (in the sense of Banaschewski-Mulvey) of the "Bohrification" of A, which is a commutative Rickart C*-algebra in the topos of functors from C(A) to the category of sets. We explain the relationship of this construction to partial Boolean algebras and Bruns-Lakser completions. Finally, we establish a connection between probability measure on the lattice of projections on a Hilbert space H and probability valuations on the internal Gelfand spectrum of A for A = B(H).Comment: 31 page

Magnetism in a lattice of spinor Bose condensates

We study the ground state magnetic properties of ferromagnetic spinor Bose-Einstein condensates confined in a deep optical lattices. In the Mott insulator regime, the ``mini-condensates'' at each lattice site behave as mesoscopic spin magnets that can interact with neighboring sites through both the static magnetic dipolar interaction and the light-induced dipolar interaction. We show that such an array of spin magnets can undergo a ferromagnetic or anti-ferromagnetic phase transition under the magnetic dipolar interaction depending on the dimension of the confining optical lattice. The ground-state spin configurations and related magnetic properties are investigated in detail

Synthetic Lethal Targeting of ARID1A-Mutant Ovarian Clear Cell Tumors with Dasatinib

New targeted approaches to ovarian clear cell carcinomas (OCCC) are needed, given the limited treatment options in this disease and the poor response to standard chemotherapy. Using a series of high-throughput cell-based drug screens in OCCC tumor cell models, we have identified a synthetic lethal (SL) interaction between the kinase inhibitor dasatinib and a key driver in OCCC, ARID1A mutation. Imposing ARID1A deficiency upon a variety of human or mouse cells induced dasatinib sensitivity, both in vitro and in vivo, suggesting that this is a robust synthetic lethal interaction. The sensitivity of ARID1A-deficient cells to dasatinib was associated with G1 -S cell-cycle arrest and was dependent upon both p21 and Rb. Using focused siRNA screens and kinase profiling, we showed that ARID1A-mutant OCCC tumor cells are addicted to the dasatinib target YES1. This suggests that dasatinib merits investigation for the treatment of patients with ARID1Amutant OCCC. Mol Cancer Ther; 15(7); 1472-84. Ó2016 AACR.</p

Drosophila MUS312 and the Vertebrate Ortholog BTBD12 Interact with DNA Structure-Specific Endonucleases in DNA Repair and Recombination

DNA recombination and repair pathways require structure-specific endonucleases to process DNA structures that include forks, flaps, and Holliday junctions. Previously, we determined that the Drosophila MEI-9-ERCC1 endonuclease interacts with the novel MUS312 protein to produce meiotic crossovers, and that MUS312 has a MEI-9-independent role in interstrand crosslink (ICL) repair. The importance of MUS312 to pathways crucial for maintaining genomic stability in Drosophila prompted us to search for orthologs in other organisms. Based on sequence, expression pattern, conserved protein-protein interactions, and ICL repair function, we determined that the mammalian ortholog of MUS312 is BTBD12. Orthology between these proteins and S. cerevisiae Slx4 helped identify a conserved interaction with a second structure-specific endonuclease, SLX1. Genetic and biochemical evidence described here and in related papers suggest that MUS312 and BTBD12 direct Holliday junction resolution by at least two distinct endonucleases in different recombination and repair contexts

Visual similarity in masking and priming: The critical role of task relevance

Cognitive scientists use rapid image sequences to study both the emergence of conscious perception (visual masking) and the unconscious processes involved in response preparation (masked priming). The present study asked two questions: (1) Does image similarity influence masking and priming in the same way? (2) Are similarity effects in both tasks governed by the extent of feature overlap in the images or only by task-relevant features? Participants in Experiment 1 classified human faces using a single dimension even though the faces varied in three dimensions (emotion, race, sex). Abstract geometric shapes and colors were tested in the same way in Experiment 2. Results showed that similarity reduced the visibility of the target in the masking task and increased response speed in the priming task, pointing to a double-dissociation between the two tasks. Results also showed that only task-relevant (not objective) similarity influenced masking and priming, implying that both tasks are influenced from the beginning by intentions of the participant. These findings are interpreted within the framework of a reentrant theory of visual perception. They imply that intentions can influence object formation prior to the separation of vision for perception and vision for action