Owen_et_al_nDNAonly

Nexus file that contains only the nDNA alignment. The file contains a partition block at the bottom of the file

Owen_et_al_mtDNA_nDNA

Nexus file that includes mtDNA and nDNA alignment with a partition block at the bottom of the file

BPP

This folder contains the input files used in BPP analyses for this study, including the six ctl files used

Garli_files

This folder contains Garli configuration files for EF1alpha, period, and the concatenated COI and COII datasets

Specimen_Name_Explanation

Explains the naming scheme and species names for specimen IDs used in the alignment files

Gene_Alignments

Nexus alignment files for all four genes used in this study: COI, COII, EF1alpha, and period, as well as an alignment file with COI and COII concatenated

Head width data of Magicicada spp.

The table includes data for mean head width by sex of Magicicada species at each sample locality with geographic variables (latitude, longitude, altitude) and habitat temperature data (annual mean temperature, annual cumulative day-degree

alignment.information.txt

Information of alignments of 2,636 orthologous loci in tab-delimited format

fsc_input_files.zip

Input files of Fastsimcoal2 for demographic simulations/inferences in Fujisawa et al. (2018). The "model_comparison" folder includes est and tpl files for demographic inferences under multiple scenarios. The "simulation" folder includes par files for simulations with parameters estimated under the best demographic models

transcriptome_alignments.zip

Fasta formatted alignments of 2,636 orthologous loci used in phylogenetic and demographic analyses of Magicicada