76 research outputs found

    An Improved Extended Information Filter SLAM Algorithm Based on Omnidirectional Vision

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    In the SLAM application, omnidirectional vision extracts wide scale information and more features from environments. Traditional algorithms bring enormous computational complexity to omnidirectional vision SLAM. An improved extended information filter SLAM algorithm based on omnidirectional vision is presented in this paper. Based on the analysis of structure a characteristics of the information matrix, this algorithm improves computational efficiency. Considering the characteristics of omnidirectional images, an improved sparsification rule is also proposed. The sparse observation information has been utilized and the strongest global correlation has been maintained. So the accuracy of the estimated result is ensured by using proper sparsification of the information matrix. Then, through the error analysis, the error caused by sparsification can be eliminated by a relocation method. The results of experiments show that this method makes full use of the characteristic of repeated observations for landmarks in omnidirectional vision and maintains great efficiency and high reliability in mapping and localization

    The impact of electronic health records (EHR) data continuity on prediction model fairness and racial-ethnic disparities

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    Electronic health records (EHR) data have considerable variability in data completeness across sites and patients. Lack of "EHR data-continuity" or "EHR data-discontinuity", defined as "having medical information recorded outside the reach of an EHR system" can lead to a substantial amount of information bias. The objective of this study was to comprehensively evaluate (1) how EHR data-discontinuity introduces data bias, (2) case finding algorithms affect downstream prediction models, and (3) how algorithmic fairness is associated with racial-ethnic disparities. We leveraged our EHRs linked with Medicaid and Medicare claims data in the OneFlorida+ network and used a validated measure (i.e., Mean Proportions of Encounters Captured [MPEC]) to estimate patients' EHR data continuity. We developed a machine learning model for predicting type 2 diabetes (T2D) diagnosis as the use case for this work. We found that using cohorts selected by different levels of EHR data-continuity affects utilities in disease prediction tasks. The prediction models trained on high continuity data will have a worse fit on low continuity data. We also found variations in racial and ethnic disparities in model performances and model fairness in models developed using different degrees of data continuity. Our results suggest that careful evaluation of data continuity is critical to improving the validity of real-world evidence generated by EHR data and health equity

    Ice-nucleating particles from multiple aerosol sources in the urban environment of Beijing under mixed-phase cloud conditions

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    Ice crystals occurring in mixed-phase clouds play a vital role in global precipitation and energy balance because of the unstable equilibrium between coexistent liquid droplets and ice crystals, which affects cloud lifetime and radiative properties, as well as precipitation formation. Satellite observations proved that immersion freezing, i.e., ice formation on particles immersed within aqueous droplets, is the dominant ice nucleation (IN) pathway in mixed-phase clouds. However, the impact of anthropogenic emissions on atmospheric IN in the urban environment remains ambiguous. In this study, we present in situ observations of ambient ice-nucleating particle number concentration (NINP) measured at mixed-phase cloud conditions (−30 ∘C, relative humidity with respect to liquid water RHw= 104 %) and the physicochemical properties of ambient aerosol, including chemical composition and size distribution, at an urban site in Beijing during the traditional Chinese Spring Festival. The impact of multiple aerosol sources such as firework emissions, local traffic emissions, mineral dust, and urban secondary aerosols on NINP is investigated. The results show that NINP during the dust event reaches up to 160 # L−1 (where “#” represents number of particles), with an activation fraction (AF) of 0.0036 % ± 0.0011 %. During the rest of the observation, NINP is on the order of 10−1 to 10 # L−1, with an average AF between 0.0001 % and 0.0002 %. No obvious dependence of NINP on the number concentration of particles larger than 500 nm (N500) or black carbon (BC) mass concentration (mBC) is found throughout the field observation. The results indicate a substantial NINP increase during the dust event, although the observation took place at an urban site with high background aerosol concentration. Meanwhile, the presence of atmospheric BC from firework and traffic emissions, along with urban aerosols formed via secondary transformation during heavily polluted periods, does not influence the observed INP concentration. Our study corroborates previous laboratory and field findings that anthropogenic BC emission has a negligible effect on NINP and that NINP is unaffected by heavy pollution in the urban environment under mixed-phase cloud conditions.</p

    MLVA genotyping of Chinese human Brucella melitensis biovar 1, 2 and 3 isolates

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    <p>Abstract</p> <p>Background</p> <p>Since 1950, <it>Brucella melitensis </it>has been the predominant strain associated with human brucellosis in China. In this study we investigated the genotypic characteristics of <it>B. melitensis </it>isolates from China using a multiple-locus variable-number tandem-repeat analysis (MLVA) and evaluated the utility of MLVA with regards to epidemiological trace-back investigation.</p> <p>Results</p> <p>A total of 105 <it>B. melitensis </it>strains isolated from throughout China were divided into 69 MLVA types using MLVA-16. Nei's genetic diversity indices for the various loci ranged between 0.00 - 0.84. 12 out 16 loci were the low diversity with values < 0.2 and the most discriminatory markers were bruce16 and bruce30 with a diversity index of > 0.75 and containing 8 and 7 alleles, respectively. Many isolates were single-locus or double-locus variants of closely related <it>B. melitensis </it>isolates from different regions, including the north and south of China. Using panel 1, the majority of strains (84/105) were genotype 42 clustering to the 'East Mediterranean' <it>B. melitensis </it>group. Chinese <it>B. melitensis </it>are classified in limited number of closely related genotypes showing variation mainly at the panel 2B loci.</p> <p>Conclusion</p> <p>The MLVA-16 assay can be useful to reveal the predominant genotypes and strain relatedness in endemic or non-endemic regions of brucellosis. However it is not suitable for biovar differentiation of <it>B. melitensis</it>. Genotype 42 is widely distributed throughout China during a long time. Bruce 16 and bruce 30 in panel 2B markers are most useful for typing Chinese isolates.</p

    Developing A Fair Individualized Polysocial Risk Score (iPsRS) for Identifying Increased Social Risk of Hospitalizations in Patients with Type 2 Diabetes (T2D)

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    Background: Racial and ethnic minority groups and individuals facing social disadvantages, which often stem from their social determinants of health (SDoH), bear a disproportionate burden of type 2 diabetes (T2D) and its complications. It is therefore crucial to implement effective social risk management strategies at the point of care. Objective: To develop an EHR-based machine learning (ML) analytical pipeline to identify the unmet social needs associated with hospitalization risk in patients with T2D. Methods: We identified 10,192 T2D patients from the EHR data (from 2012 to 2022) from the University of Florida Health Integrated Data Repository, including contextual SDoH (e.g., neighborhood deprivation) and individual-level SDoH (e.g., housing stability). We developed an electronic health records (EHR)-based machine learning (ML) analytic pipeline, namely individualized polysocial risk score (iPsRS), to identify high social risk associated with hospitalizations in T2D patients, along with explainable AI (XAI) techniques and fairness assessment and optimization. Results: Our iPsRS achieved a C statistic of 0.72 in predicting 1-year hospitalization after fairness optimization across racial-ethnic groups. The iPsRS showed excellent utility for capturing individuals at high hospitalization risk; the actual 1-year hospitalization rate in the top 5% of iPsRS was ~13 times as high as the bottom decile. Conclusion: Our ML pipeline iPsRS can fairly and accurately screen for patients who have increased social risk leading to hospitalization in T2D patients

    Optical bulk-boundary dichotomy in a quantum spin Hall insulator

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    The bulk-boundary correspondence is a key concept in topological quantum materials. For instance, a quantum spin Hall insulator features a bulk insulating gap with gapless helical boundary states protected by the underlying Z2 topology. However, the bulk-boundary dichotomy and distinction are rarely explored in optical experiments, which can provide unique information about topological charge carriers beyond transport and electronic spectroscopy techniques. Here, we utilize mid-infrared absorption micro-spectroscopy and pump-probe micro-spectroscopy to elucidate the bulk-boundary optical responses of Bi4Br4, a recently discovered room-temperature quantum spin Hall insulator. Benefiting from the low energy of infrared photons and the high spatial resolution, we unambiguously resolve a strong absorption from the boundary states while the bulk absorption is suppressed by its insulating gap. Moreover, the boundary absorption exhibits a strong polarization anisotropy, consistent with the one-dimensional nature of the topological boundary states. Our infrared pump-probe microscopy further measures a substantially increased carrier lifetime for the boundary states, which reaches one nanosecond scale. The nanosecond lifetime is about one to two orders longer than that of most topological materials and can be attributed to the linear dispersion nature of the helical boundary states. Our findings demonstrate the optical bulk-boundary dichotomy in a topological material and provide a proof-of-principal methodology for studying topological optoelectronics.Comment: 26 pages, 4 figure

    Structural basis of Mcm2–7 replicative helicase loading by ORC–Cdc6 and Cdt1

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    To start DNA replication, the Origin Recognition Complex (ORC) and Cdc6 load a Mcm2-7 double hexamer onto DNA. Without ATP hydrolysis, ORC-Cdc6 recruits one Cdt1-bound Mcm2-7 hexamer, forming an ORC-Cdc6-Cdt1-Mcm2-7 (OCCM) helicase loading intermediate. Here we report a 3.9Å structure of the OCCM on DNA. Flexible Mcm2-7 winged-helix domains (WHD) engage ORC-Cdc6. A three-domain Cdt1 configuration embraces Mcm2, Mcm4, and Mcm6, nearly half of the hexamer. The Cdt1 C-terminal domain extends to the Mcm6 WHD, which binds Orc4 WHD. DNA passes through the ORC-Cdc6 and Mcm2-7 rings. Origin DNA interaction is mediated by an a-helix in Orc4 and positively charged loops in Orc2 and Cdc6. The Mcm2-7 C-tier AAA+ ring is topologically closed by a Mcm5 loop that embraces Mcm2, but the N-tier ring Mcm2-Mcm5 interface remains open. This structure suggests loading mechanics of the first Cdt1-bound Mcm2-7 hexamer by ORC-Cdc6
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