Fibronectin Contributes To Notochord Intercalation In The Invertebrate Chordate, Ciona Intestinalis

Background: Genomic analysis has upended chordate phylogeny, placing the tunicates as the sister group to the vertebrates. This taxonomic rearrangement raises questions about the emergence of a tunicate/vertebrate ancestor. Results: Characterization of developmental genes uniquely shared by tunicates and vertebrates is one promising approach for deciphering developmental shifts underlying acquisition of novel, ancestral traits. The matrix glycoprotein Fibronectin (FN) has long been considered a vertebrate-specific gene, playing a major instructive role in vertebrate embryonic development. However, the recent computational prediction of an orthologous “vertebrate-like” Fn gene in the genome of a tunicate, Ciona savignyi, challenges this viewpoint suggesting that Fn may have arisen in the shared tunicate/vertebrate ancestor. Here we verify the presence of a tunicate Fn ortholog. Transgenic reporter analysis was used to characterize a Ciona Fn enhancer driving expression in the notochord. Targeted knockdown in the notochord lineage indicates that FN is required for proper convergent extension. Conclusions: These findings suggest that acquisition of Fn was associated with altered notochord morphogenesis in the vertebrate/tunicate ancestor

Precision Enhancement of 3D Surfaces from Multiple Compressed Depth Maps

In texture-plus-depth representation of a 3D scene, depth maps from different camera viewpoints are typically lossily compressed via the classical transform coding / coefficient quantization paradigm. In this paper we propose to reduce distortion of the decoded depth maps due to quantization. The key observation is that depth maps from different viewpoints constitute multiple descriptions (MD) of the same 3D scene. Considering the MD jointly, we perform a POCS-like iterative procedure to project a reconstructed signal from one depth map to the other and back, so that the converged depth maps have higher precision than the original quantized versions.Comment: This work was accepted as ongoing work paper in IEEE MMSP'201

Superfluid-insulator transition of the Josephson junction array model with commensurate frustration

We have studied the rationally frustrated Josephson-junction array model in the square lattice through Monte Carlo simulations of $(2+1)$D XY-model. For frustration $f=1/4$, the model at zero temperature shows a continuous superfluid-insulator transition. From the measurement of the correlation function and the superfluid stiffness, we obtain the dynamical critical exponent $z=1.0$ and the correlation length critical exponent $\nu=0.4 \pm 0.05$. While the dynamical critical exponent is the same as that for cases $f=0$, 1/2, and 1/3, the correlation length critical exponent is surprisingly quite different. When $f=1/5$, we have the nature of a first-order transition.Comment: RevTex 4, to appear in PR

Localized ferromagnetic resonance force microscopy in permalloy-cobalt films

We report Ferromagnetic Resonance Force Microscopy (FMRFM) experiments on a justaposed continuous films of permalloy and cobalt. Our studies demonstrate the capability of FMRFM to perform local spectroscopy of different ferromagnetic materials. Theoretical analysis of the uniform resonance mode near the edge of the film agrees quantitatively with experimental data. Our experiments demonstrate the micron scale lateral resolution in determining local magnetic properties in continuous ferromagnetic samples.Comment: 7 pages, 3 figure

Third-order optical autocorrelator for time-domain operation at telecommunication wavelengths

We report on amorphous organic thin films that exhibit efficient third-harmonic generation at telecommunication wavelengths. At 1550 nm, micrometer-thick samples generate up to 17 µW of green light with input power of 250 mW delivered by an optical parametric oscillator. This high conversion efficiency is achieved without phase matching or cascading of quadratic nonlinear effects. With these films, we demonstrate a low-cost, sensitive third-order autocorrelator that can be used in the time-frequency domain

Who Contributes to the Knowledge Sharing Economy?

Information sharing dynamics of social networks rely on a small set of influencers to effectively reach a large audience. Our recent results and observations demonstrate that the shape and identity of this elite, especially those contributing \emph{original} content, is difficult to predict. Information acquisition is often cited as an example of a public good. However, this emerging and powerful theory has yet to provably offer qualitative insights on how specialization of users into active and passive participants occurs. This paper bridges, for the first time, the theory of public goods and the analysis of diffusion in social media. We introduce a non-linear model of \emph{perishable} public goods, leveraging new observations about sharing of media sources. The primary contribution of this work is to show that \emph{shelf time}, which characterizes the rate at which content get renewed, is a critical factor in audience participation. Our model proves a fundamental \emph{dichotomy} in information diffusion: While short-lived content has simple and predictable diffusion, long-lived content has complex specialization. This occurs even when all information seekers are \emph{ex ante} identical and could be a contributing factor to the difficulty of predicting social network participation and evolution.Comment: 15 pages in ACM Conference on Online Social Networks 201

Ultrafast-pulse diagnostic using third-order frequency-resolved optical gating in organic films

We report on the diagnostic of ultrafast pulses by frequency-resolved optical gating (FROG) based on strong third-harmonic generation (THG) in amorphous organic thin films. The high THG conversion efficiency of these films allows for the characterization of sub-nanojoule short pulses emitting at telecommunication wavelengths using a low cost portable fiber spectrometer

The Distance to the Vela Supernova Remnant

We have obtained high resolution Ca II and Na I absorption line spectra toward 68 OB stars in the direction of the Vela Supernova Remnant. The stars lie at distances of 190 -- 2800 pc as determined by Hipparcos and spectroscopic parallax estimations. The presence of high velocity absorption attributable to the remnant along some of the sight lines constrains the remnant distance to 250+/-30 pc. This distance is consistent with several recent investigations that suggest that the canonical remnant distance of 500 pc is too large.Comment: To be published in The Astrophysical Journal Letters Figure 1 y-axis labels correcte

Osmotic potential, photosynthetic abilities and growth characters of oil palm (Elaeis guineensis Jacq.) seedlings in responses to polyethylene glycol-induced water deficit

The aim of the present study is to investigate the biochemical, physiological and morphological responses of oil palm seedlings when exposed to polyethylene glycol (PEG)-induced water deficit. Oil palm seedlings were photo-autotrophically grown in MS media and subsequently exposed to -0.23 (control), -0.42, -0.98 or -2.15 MPa PEG-induced water deficit. Osmotic potential (Ψs) in root and leaf tissues of oil palm seedlings grown under PEG-induced water deficit was decreased leading to chlorophyll degradation. Chlorophyll a (Chla), chlorophyll b (Chlb), total chlorophyll (TC), total carotenoids (Cx+c), maximum quantum yield of photosystem II (PSII) (Fv/Fm) and photon yield of PSII (ΦPSII) in the oil palm seedlings under water deficit conditions dropped significantly in comparison to the control group, leading to a reduction in net-photosynthetic rate (Pn) and growth. A positive correlation between physiological and growth parameters, including osmotic potential, photosynthetic pigments and water oxidation in photosystem II and Pn was demonstrated. These data provide the basis for the establishment of multivariate criteria for water deficit tolerance screening in oil palm breeding programs.Key words: Chlorophyll fluorescence, net-photosynthetic rate, pigment, water oxidation, water deficit stress

Screening upland rice (Oryza sativa L. ssp. indica) genotypes for salt-tolerance using multivariate cluster analysis

Seedlings of thirteen genotypes of rice were photoautotrophically grown on MS medium and subsequently exposed to 0 (control) or 200 mM NaCl (salt stress) for 14 days. Chlorophyll a (Chla), chlorophyll b (Chlb) and total carotenoids (Cx+c), in the salt stressed leaves of all genotypes decreasedsignificantly, but the extent of the decrease varied among different genotypes. Maximum quantum yield of photosystem II (PSII) (Fv/Fm), photon yield of PSII (FPSII) and net photosynthetic rate (Pn) in saltstressed seedlings of all genotypes dropped significantly, whereas FPSII in cv. Homjan (HJ), Dokpayom (DPY), Chewmaejan 2 (CMJ2) and upland rice 1 (UR1) were alleviated. Moreover, growth parameters including shoot height, root length, fresh weight, dry weight and leaf area in salt stressed plantlets of all genotypes were significantly inhibited. The pigment degradation, photosynthetic abilities and growth inhibition in saline regimes were subjected to hierarchical cluster analysis, which lead to theclassification of Kumuangluang (KML), Khao Dawk Mali (KDML), Pokkali (POK), HJ, DPY, Chewmaejan 1 (CMJ1), CMJ2, UR1 and Chowho (CH) as salt tolerant and R258, Pathumthani 1 (PT1), IR29 and upland rice 2 (UR2) as salt sensitive