Instrumental and perceptual evaluation of dereverberation techniques based on robust acoustic multichannel equalization

Speech signals recorded in an enclosed space by microphones at a distance from the speaker are often corrupted by reverberation, which arises from the superposition of many delayed and attenuated copies of the source signal. Because reverberation degrades the signal, removing reverberation would enhance quality. Dereverberation techniques based on acoustic multichannel equalization are known to be sensitive to room impulse response perturbations. In order to increase robustness, several methods have been proposed, as for example, using a shorter reshaping filter length, incorporating regularization, or applying a sparsity-promoting penalty function. This paper focuses on evaluating the performance of these methods for single-source multi-microphone scenarios, using instrumental performance measures as well as using subjective listening tests. By analyzing the correlation between the instrumental and the perceptual results, it is shown that signal-based performance measures are more advantageous than channel-based performance measures to evaluate the perceptual speech quality of signals that were dereverberated by equalization techniques. Furthermore, this analysis also demonstrates the need to develop more reliable instrumental performance measures

Measuring, modelling and predicting perceived reverberation

This paper investigates the relationship between the perceived level of reverberation and parameters measured from the room impulse response (RIR), as well as the design of an instrumental measure that predicts this perceived level. We first present the results of an experimental listening test conducted to assess the level of perceived reverberation in speech captured by a single microphone, before analysing the gathered data to assess the influence of parameters such as the reverberation time (T60) or the direct-to-reverberant ratio (DRR). Secondly, we use the results of this analysis to improve the signal based reverberation decay tail (RDT) measure, previously proposed by the authors to predict the perceived level of reverberation. The accuracy of the proposed measure is evaluated in terms of correlation with the subjective scores and compared to the performance of predictors using parameters extracted from the RIR. Results show that the proposed modifications to the RDT does improve its accuracy. Though still slightly outperformed by measures based on parameters of the RIR, we believe the proposed measure to be useful in scenarios in which the RIR or its parameters are unknown

Common variants of the TCF7L2 gene are associated with increased risk of type 2 diabetes mellitus in a UK-resident South Asian population

Background Recent studies have implicated variants of the transcription factor 7-like 2 (TCF7L2) gene in genetic susceptibility to type 2 diabetes mellitus in several different populations. The aim of this study was to determine whether variants of this gene are also risk factors for type 2 diabetes development in a UK-resident South Asian cohort of Punjabi ancestry. Methods We genotyped four single nucleotide polymorphisms (SNPs) of TCF7L2 (rs7901695, rs7903146, rs11196205 and rs12255372) in 831 subjects with diabetes and 437 control subjects. Results The minor allele of each variant was significantly associated with type 2 diabetes; the greatest risk of developing the disease was conferred by rs7903146, with an allelic odds ratio (OR) of 1.31 (95% CI: 1.11 – 1.56, p = 1.96 × 10-3). For each variant, disease risk associated with homozygosity for the minor allele was greater than that for heterozygotes, with the exception of rs12255372. To determine the effect on the observed associations of including young control subjects in our data set, we reanalysed the data using subsets of the control group defined by different minimum age thresholds. Increasing the minimum age of our control subjects resulted in a corresponding increase in OR for all variants of the gene (p ≤ 1.04 × 10-7). Conclusion Our results support recent findings that TCF7L2 is an important genetic risk factor for the development of type 2 diabetes in multiple ethnic groups

Data analysis tools for safe drinking water production

Providing safe and high quality drinking water is essential for a high quality of life. However, the water resources in Europe are threatened by various sources of contamination. This has led to the development of concepts and technologies to create a basis for provision of safe and high quality drinking water, which had thus resulted in the formation of the Artificial Recharge Demonstration project (ARTDEMO). The overall aim of this thesis in relation to the ARTDEMO project was to develop a realtime automated water monitoring system, capable of using data from various complementary sources to determine the amounts of inorganic and organic pollutants. The application of multivariate calibration to differential pulse anodic stripping voltammograms and fluorescence spectra (emission and excitation-emission matrix) is presented. The quantitative determination of cadmium, lead and copper acquired on carbon-ink screen-printed electrodes, arsenic and mercury acquired on gold-ink screen-printed electrodes, in addition to the quantitative determination of anthracene, phenanthrene and naphthalene have been realised. The statistically inspired modification of partial least squares (SIMPLS) algorithm has been shown to be the better modelling tool, in terms of the root mean square error of prediction (RMSEP), in conjunction with application of data pre-treatment techniques involving rangescaling, filtering and weighting of variables. The % recoveries of cadmium, lead and copper in a certified reference material by graphite furnace atomic absorption spectrometry (GF-AAS) and multivariate calibration are in good agreement. The development of a prototype application on a personal digital assistant (PDA) device is described. At-line analysis at potential contamination sites in which an instant response is required is thus possible. This provides quantitative screening of target metal ions. The application imports the acquired voltammograms, standardises them against the laboratory-acquired voltammograms (using piecewise direct standardisation), and predicts the concentrations of the target metal ions using previously trained SIMPLS models. This work represents significant progress in the development of analytical techniques for water quality determination, in line with the ARTDEMO project's aim of maintaining a high quality of drinking water.EThOS - Electronic Theses Online ServiceGBUnited Kingdo

Contribution of type 2 diabetes associated loci in the Arabic population from Tunisia: a case-control study

<p>Abstract</p> <p>Background</p> <p>Candidate gene and genome-wide association studies have both reproducibly identified several common Single Nucleotide Polymorphisms (SNPs) that confer type 2 diabetes (T2D) risk in European populations. Our aim was to evaluate the contribution to T2D of five of these established T2D-associated loci in the Arabic population from Tunisia.</p> <p>Methods</p> <p>A case-control design comprising 884 type 2 diabetic patients and 513 control subjects living in the East-Center of Tunisia was used to analyze the contribution to T2D of the following SNPs: E23K in <it>KCNJ11/Kir6.2</it>, K121Q in <it>ENPP1</it>, the -30G/A variant in the pancreatic β-cell specific promoter of Glucokinase, rs7903146 in <it>TCF7L2 </it>encoding transcription factor 7-like2, and rs7923837 in <it>HHEX </it>encoding the homeobox, hematopoietically expressed transcription factor.</p> <p>Results</p> <p><it>TCF7L2</it>-rs7903146 T allele increased susceptibility to T2D (OR = 1.25 [1.06–1.47], <it>P </it>= 0.006) in our study population. This risk was 56% higher among subjects carrying the TT genotype in comparison to those carrying the CC genotype (OR = 1.56 [1.13–2.16], <it>P </it>= 0.002). No allelic or genotypic association with T2D was detected for the other studied polymorphisms.</p> <p>Conclusion</p> <p>In the Tunisian population, <it>TCF7L2</it>-rs7903146 T allele confers an increased risk of developing T2D as previously reported in the European population and many other ethnic groups. In contrast, none of the other tested SNPs that influence T2D risk in the European population was associated with T2D in the Tunisian Arabic population. An insufficient power to detect minor allelic contributions or genetic heterogeneity of T2D between different ethnic groups can explain these findings.</p

TCF7L2 variant genotypes and type 2 diabetes risk in Brazil: significant association, but not a significant tool for risk stratification in the general population

<p>Abstract</p> <p>Background</p> <p>Genetic polymorphisms of the <it>TCF7L2 </it>gene are strongly associated with large increments in type 2 diabetes risk in different populations worldwide. In this study, we aimed to confirm the effect of the <it>TCF7L2 </it>polymorphism <it>rs7903146 </it>on diabetes risk in a Brazilian population and to assess the use of this genetic marker in improving diabetes risk prediction in the general population.</p> <p>Methods</p> <p>We genotyped the single nucleotide polymorphisms (SNP) rs7903146 of the <it>TCF7L2 </it>gene in 560 patients with known coronary disease enrolled in the MASS II (Medicine, Angioplasty, or Surgery Study) Trial and in 1,449 residents of Vitoria, in Southeast Brazil. The associations of this gene variant to diabetes risk and metabolic characteristics in these two different populations were analyzed. To access the potential benefit of using this marker for diabetes risk prediction in the general population we analyzed the impact of this genetic variant on a validated diabetes risk prediction tool based on clinical characteristics developed for the Brazilian general population.</p> <p>Results</p> <p>SNP rs7903146 of the <it>TCF7L2 </it>gene was significantly associated with type 2 diabetes in the MASS-II population (OR = 1.57 per T allele, p = 0.0032), confirming, in the Brazilian population, previous reports of the literature. Addition of this polymorphism to an established clinical risk prediction score did not increased model accuracy (both area under ROC curve equal to 0.776).</p> <p>Conclusion</p> <p><it>TCF7L2 </it>rs7903146 T allele is associated with a 1.57 increased risk for type 2 diabetes in a Brazilian cohort of patients with known coronary heart disease. However, the inclusion of this polymorphism in a risk prediction tool developed for the general population resulted in no improvement of performance. This is the first study, to our knowledge, that has confirmed this recent association in a South American population and adds to the great consistency of this finding in studies around the world. Finally, confirming the biological association of a genetic marker does not guarantee improvement on already established screening tools based solely on demographic variables.</p

The transcription factor 7-like 2 (TCF7L2) polymorphism may be associated with focal arteriolar narrowing in Caucasians with hypertension or without diabetes: the ARIC Study

<p>Abstract</p> <p>Background</p> <p>Transcription factor 7-like 2 (<it>TCF7L2</it>) has emerged as a consistently replicated susceptibility gene for type 2 diabetes, however, whether the <it>TCF7L2 </it>gene also has similar effects on the retinal microvasculature is less clear. We therefore aimed to investigate the association between the transcription factor 7-like 2 (<it>TCF7L2</it>) rs7903146 polymorphism and retinal microvascular phenotypes in the Atherosclerosis Risk in Communities (ARIC) Study (1993-1995).</p> <p>Methods</p> <p>This was a population-based, cross-sectional study of 10,320 middle-aged African American (n = 2,199) and Caucasian (n = 8,121) men and women selected from four United States communities to examine the association between <it>TCF7L2 </it>rs7903146 polymorphism and retinal microvascular signs (retinopathy, focal arteriolar narrowing, arteriovenous nicking, arteriolar and venular calibers). Photographs on one randomly selected eye were graded for presence of retinal microvascular signs and used to measure retinal vessel calibres.</p> <p>Results</p> <p>After adjusting for age, sex, study center, mean arterial blood pressure, total serum cholesterol, triglycerides, and other covariates, few associations of <it>TCF7L2 </it>rs7903146 and retinal microvascular signs were noted. <it>TCF7L2 </it>rs7903146 T risk allele was significantly associated with focal arteriolar narrowing in Caucasians with hypertension [odds ratio (OR)_{CT vs. CC}(95% CI) = 1.25 (1.09-1.44); OR_{TT vs. CC}= 1.56 (1.18-2.06); <it>P </it>= 0.002] and in Caucasians without diabetes [OR _{CT vs. CC}= 1.18 (1.06-1.32); OR _{TT vs. CC}= 1.40 (1.12, 1.75); <it>P </it>= 0.003]. No significant association of the <it>TCF7L2 </it>rs7903146 polymorphism and retinal vascular signs was noted among African American individuals.</p> <p>Conclusions</p> <p><it>TCF7L2 </it>rs7903146 is not consistently associated with retinal microvascular signs. However, we report an association between the <it>TCF7L2 </it>rs7903146 polymorphism and focal arteriolar narrowing in Caucasians with hypertension or without diabetes. Further research in other large, population-based studies is needed to replicate these findings.</p