2,600 research outputs found

    The hitchhiker's guide to avian malaria

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    The ecological mechanisms underlying the dispersal of parasites are poorly understood, which is of particular concern in view of currently emerging infectious diseases. In a new study, Pérez-Tris and Bensch examined the distribution and prevalence of avian malaria in a migratory bird across Western Europe. They concluded that repeated independent evolution of year-round transmission has enabled some avian malaria lineages to become more widespread, and more prevalent, than lineages that are transmitted only during the summer. This study blurs the boundaries of evolutionary ecology, epidemiology and macroecology with great potential for cross-disciplinary research

    Seasonal variation in Plasmodium prevalence in a population of blue tits Cyanistes caeruleus

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    1. Seasonal variation in environmental conditions is ubiquitous and can affect the spread of infectious diseases. Understanding seasonal patterns of disease incidence can help to identify mechanisms, such as the demography of hosts and vectors, which influence parasite transmission dynamics. 2. We examined seasonal variation in Plasmodium infection in a blue tit Cyanistes caeruleus population over 3 years using sensitive molecular diagnostic techniques, in light of Beaudoin et al.'s (1971; Journal of Wildlife Diseases, 7, 5–13) model of seasonal variation in avian malaria prevalence in temperate areas. This model predicts a within-year bimodal pattern of spring and autumn peaks with a winter absence of infection. 3. Avian malaria infections were mostly Plasmodium (24·4%) with occasional Haemoproteus infections (0·8%). Statistical nonlinear smoothing techniques applied to longitudinal presence/absence data revealed marked temporal variation in Plasmodium prevalence, which apparently showed a within-year bimodal pattern similar to Beaudoin et al.'s model. However, of the two Plasmodium morphospecies accounting for most infections, only the seasonal pattern of Plasmodium circumflexum supported Beaudoin et al.'s model. On closer examination there was also considerable age structure in infection: Beaudoin et al.'s seasonal pattern was observed only in first year and not older birds. Plasmodium relictum prevalence was less seasonally variable. 4. For these two Plasmodium morphospecies, we reject Beaudoin et al.'s model as it does not survive closer scrutiny of the complexities of seasonal variation among Plasmodium morphospecies and host age classes. Studies of host–parasite interactions should consider seasonal variation whenever possible. We discuss the ecological and evolutionary implications of seasonal variation in disease prevalence

    Within-population variation in prevalence and lineage distribution of avian malaria in blue tits, Cyanistes caeruleus

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    The development of molecular genetic screening techniques for avian blood parasites has revealed many novel aspects of their ecology, including greatly elevated diversity and complex host–parasite relationships. Many previous studies of malaria in birds have treated single study populations as spatially homogeneous with respect to the likelihood of transmission of malaria to hosts, and we have very little idea whether any spatial heterogeneity influences different malaria lineages similarly. Here, we report an analysis of variation in the prevalence and cytochrome b lineage distribution of avian malaria infection with respect to environmental and host factors, and their interactions, in a single blue tit (Cyanistes caeruleus) population. Of 11 Plasmodium and Haemoproteus cytochrome b lineages found in 997 breeding individuals, the three most numerous (pSGS1, pTURDUS1 and pBT7) were considered separately, in addition to analyses of all avian malaria lineages pooled. Our analyses revealed marked spatial differences in the prevalence and distribution of these lineages, with local prevalence of malaria within the population ranging from over 60% to less than 10%. In addition, we found several more complex patterns of prevalence with respect to local landscape features, host state, parasite genotype, and their interactions. We discuss the implications of such heterogeneity in parasite infection at a local scale for the study of the ecology and evolution of infectious diseases in natural populations. The increased resolution afforded by the combination of molecular genetic and geographical information systems (GIS) tools has the potential to provide many insights into the epidemiology, evolution and ecology of these parasites in the future

    Low prevalence of liver disease but regional differences in HBV treatment characteristics mark HIV/HBV co-infection in a South African HIV clinical trial

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    BACKGROUND: Hepatitis B virus (HBV) infection is endemic in South Africa however, there is limited data on the degree of liver disease and geographic variation in HIV/HBV coinfected individuals. In this study, we analysed data from the CIPRA-SA 'Safeguard the household study' in order to assess baseline HBV characteristics in HIV/HBV co-infection participants prior to antiretroviral therapy (ART) initiation. METHODS: 812 participants from two South African townships Soweto and Masiphumelele were enrolled in a randomized trial of ART (CIPRA-SA). Participants were tested for hepatitis B surface antigen (HBsAg), hepatitis B e antigen (HBeAg), and HBV DNA. FIB-4 scores were calculated at baseline. RESULTS: Forty-eight (5.9%) were HBsAg positive, of whom 28 (58.3%) were HBeAg positive. Of those with HBV, 29.8% had an HBV DNA<2000 IU/ml and ALT<40 IU/ml ; 83.0% had a FIB-4 score <1.45, consistent with absent or minimal liver disease. HBV prevalence was 8.5% in Masiphumelele compared to 3.8% in Soweto (relative risk 2.3; 95% CI: 1.3-4.0). More participants in Masiphumelele had HBeAg-negative disease (58% vs. 12%, p = 0.002) and HBV DNA levels ≤2000 IU/ml, (43% vs. 6% p<0.007). CONCLUSION: One third of HIV/HBV co-infected subjects had low HBV DNA levels and ALT while the majority had indicators of only mild liver disease. There were substantial regional differences in HBsAg and HbeAg prevalence in HIV/HBV co-infection between two regions in South Africa. This study highlights the absence of severe liver disease and the marked regional differences in HIV/HBV co-infection in South Africa and will inform treatment decisions in these populations

    Mammals in the Chornobyl Exclusion Zone's Red Forest: a motion-activated camera trap study

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    Since the accident at the Chornobyl Nuclear Power Plant in 1986, there have been few studies published on medium and large mammals inhabiting the area from which the human population was removed (now referred to as the Chornobyl Exclusion Zone, CEZ). The dataset presented in this paper describes a motion-activated camera trap study (n=21 cameras) conducted from September 2016 to September 2017 in the Red Forest located within the Chornobyl Exclusion Zone. The Red Forest, which is likely the most anthropogenically contaminated radioactive terrestrial ecosystem on earth, suffered a severe wildfire in July 2016. The motion-activated trap cameras were therefore in place as the Red Forest recovered from the wildfire. A total of 45 859 images were captured, and of these 19 391 contained identifiable species or organism types (e.g. insects). A total of 14 mammal species were positively identified together with 23 species of birds (though birds were not a focus of the study). Weighted absorbed radiation dose rates were estimated for mammals across the different camera trap locations; the number of species observed did not vary with estimated dose rate. We also observed no relationship between estimated weighted absorbed radiation dose rates and the number of triggering events for the four main species observed during the study (brown hare, Eurasian elk, red deer, roe deer). The data presented will be of value to those studying wildlife within the CEZ from the perspectives of the potential effects of radiation on wildlife and also rewilding in this large, abandoned area. They may also have value in any future studies investigating the impacts of the recent Russian military action in the CEZ. The data and supporting documentation are freely available from the Environmental Information Data Centre (EIDC) under the terms and conditions of a Creative Commons Attribution (CC BY) license: https://doi.org/10.5285/bf82cec2-5f8a-407c-bf74-f8689ca35e83 (Barnett et al., 2022a)

    The long-term dynamics of invasive signal crayfish forcing of fluvial sediment supply via riverbank burrowing

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    Animals are important drivers of sediment dynamics. Invasive signal crayfish (Pacifastacus leniusculus) have been shown to supply sediment to rivers by burrowing into riverbanks. Burrowing directly transfers excavated sediment into the river and also has an additional indirect affect by promoting riverbank failure. While previous research has isolated burrow densities at a point in time, rates of burrow construction and of burrow loss due to erosion are unknown, which introduces uncertainty into estimates of how much sediment burrows contribute to rivers. Here we report results from a 5-year study that evaluated the temporal dynamics of crayfish populations, rates of burrow loss due to erosion, and the mass of sediment directly supplied to rivers by burrow excavation. At ten reaches across five lowland streams in England, we estimated the mass of sediment displaced by 1861 new and previously constructed burrows. Both crayfish and burrow densities were variable over time, suggesting that burrows contribute temporally variable amounts of fine sediment to riverine systems. 42 % of observed burrows were constructed within the previous 365 days, and individual burrows lasted on average 461 days. Applying this to comparable historical data, an average of 2.0 t km−1 a−1 of sediment was excavated to construct burrows in the study reaches, which is eight times more than estimated in previous studies. Whilst total burrow densities in each year were not consistently correlated with contemporary crayfish densities, the mass of sediment excavated over the prior year was strongly correlated with contemporary crayfish densities. Current fine sediment management practices are largely aimed at controlling fine sediment delivery, predominately from agricultural activities, but biotic burrowing into riverbanks may represent an important and overlooked source of fine sediment supply. Incorporation of biotic processes in sediment dynamics would improve the accuracy of fluvial sediment budgets and enhance the knowledge base underpinning effective fine-sediment management practices

    Observed and Expected Incidence of Cervical Cancer in Lusaka and the Southern and Western Provinces of Zambia, 2007 - 2012

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    Objectives—Cervical cancer is increasing but underestimated in developing countries. We calculated the observed and expected incidence of cervical cancer in Lusaka and Southern and Western provinces of Zambia. Methods/Materials—Data for 2007-2012 was obtained for the 3 provinces. Data included age, residence, year of diagnosis, marital status, occupation, HIV, stage, radiotherapy and chemotherapy. Expected incidence in Southern and Western provinces was calculated based on observed incidence for Lusaka province, adjusting for HIV. Results—Crude and age-standardized incidence rates (ASR) in Lusaka were 2-4 times higher than incidence in the other 2 provinces. Lusaka had a rate of 54.1/105 and ASR of 82.1/105 in the age group 15-49. The Southern province had a rate of 17.1/105 and ASR of 25.5/105; Western province rate of 12.3/105 and ASR rate of 17.2/105. The observed cervical cancer incidence rates in the Southern and Western provinces were lower than the rate in Lusaka, possibly due to the uncertainty of underreporting/under-diagnosis or actual lower risk for reasons yet unclear. HIV seroprevalence rate in patients from the 3 provinces were 46 – 93% higher than seroprevalence in the respective general populations. Conclusion—Cervical cancer is significantly underestimated in Zambia and HIV has a significant role in pathogenesis. Future studies should establish methods for case ascertainment and better utilization of hospital- and population-based registries in Zambia and other similar developing countries

    Total Synthesis of (±)-Welwitindolinone A Isonitrile

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    A highly stereoselective total synthesis of the alkaloid natural product welwitindolinone A isonitrile has been completed. The synthesis utilizes a chloronium ion mediated semi-pinacol rearrangement to simultaneously install the C10 quaternary center and neopentyl chlorine and a novel anionic cyclization to construct the spiro-oxindole with complete stereocontrol
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