Expression of major photosynthetic and salt-resistance genes in invasive reed lineages grown under elevated CO2 and temperature

It is important to investigate the molecular causes of the variation in ecologically important traits to fully understand phenotypic responses to climate change. In the Mississippi River Delta, two distinct, sympatric invasive lineages of common reed (Phragmites australis) are known to differ in several ecophysiological characteristics and are expected to become more salt resistant due to increasing atmospheric CO2 and temperature. We investigated whether different patterns of gene expression can explain their ecophysiological differences and increased vigor under future climatic conditions. We compared the transcript abundance of photosynthetic genes of the Calvin cycle (Rubisco small subunit, RbcS; Phosphoglycerate kinase, PGK; Phosphoribulokinase, PRK), genes related with salt transport (Na+/H+ antiporter, PhaNHA) and oxidative stress response genes (Manganese Superoxide dismutase, MnSOD; Glutathione peroxidase, GPX), and the total aboveground biomass production between two genotypes representing the two lineages. The two genotypes (Delta-type, Mediterranean lineage, and EU-type, Eurasian lineage) were grown under an ambient and a future climate scenario with simultaneously elevated CO2 and temperature, and under two different soil salinities (0‰ or 20‰). We found neither differences in the aboveground biomass production nor the transcript abundances of the two genotypes, but soil salinity significantly affected all the investigated parameters, often interacting with the climatic conditions. At 20‰ salinity, most genes were higher expressed in the future than in the ambient climatic conditions. Higher transcription of the genes suggests higher abundance of the protein they code for, and consequently increased photosynthate production, improved stress responses, and salt exclusion. Therefore, the higher expression of these genes most likely contributed to the significantly ameliorated salinity impact on the aboveground biomass production of both P. australis genotypes under elevated temperature and CO2. Although transcript abundances did not explain differences between the lineages, they correlated with the increased vigor of both lineages under anticipated future climatic conditions. Two sympatric, highly invasive lineages of Phragmites australis from North America differ in their ecophysiological responses to salinity and climate, and differences in gene expression may cause these different phenotypic traits. Under a future climatic scenario and high soil salinity, the expression of photosynthetic and salt-stress related genes was increased in both lineages, relative to the ambient climate, but the phenotypic differences between the lineages were not explained by the gene expression. Similar changes in gene expression may therefore facilitate salt resistance and an increased invasive vigour of both reed lineages under the changing climate

Genetic diversity in three invasive clonal aquatic species in New Zealand

<p>Abstract</p> <p>Background</p> <p><it>Elodea canadensis, Egeria densa </it>and <it>Lagarosiphon major </it>are dioecious clonal species which are invasive in New Zealand and other regions. Unlike many other invasive species, the genetic variation in New Zealand is very limited. Clonal reproduction is often considered an evolutionary dead end, even though a certain amount of genetic divergence may arise due to somatic mutations. The successful growth and establishment of invasive clonal species may be explained not by adaptability but by pre-existing ecological traits that prove advantageous in the new environment. We studied the genetic diversity and population structure in the North Island of New Zealand using AFLPs and related the findings to the number of introductions and the evolution that has occurred in the introduced area.</p> <p>Results</p> <p>Low levels of genetic diversity were found in all three species and appeared to be due to highly homogeneous founding gene pools. <it>Elodea canadensis </it>was introduced in 1868, and its populations showed more genetic structure than those of the more recently introduced of <it>E. densa </it>(1946) and <it>L. major </it>(1950). <it>Elodea canadensis </it>and <it>L. major</it>, however, had similar phylogeographic patterns, in spite of the difference in time since introduction.</p> <p>Conclusions</p> <p>The presence of a certain level of geographically correlated genetic structure in the absence of sexual reproduction, and in spite of random human dispersal of vegetative propagules, can be reasonably attributed to post-dispersal somatic mutations. Direct evidence of such evolutionary events is, however, still insufficient.</p

Competition among native and invasive Phragmites australis populations: An experimental test of the effects of invasion status, genome size, and ploidy level

Among the traits whose relevance for plant invasions has recently been suggested are genome size (the amount of nuclear DNA) and ploidy level. So far, research on the role of genome size in invasiveness has been mostly based on indirect evidence by comparing species with different genome sizes, but how karyological traits influence competition at the intraspecific level remains unknown. We addressed these questions in a common‐garden experiment evaluating the outcome of direct intraspecific competition among 20 populations of Phragmites australis, represented by clones collected in North America and Europe, and differing in their status (native and invasive), genome size (small and large), and ploidy levels (tetraploid, hexaploid, or octoploid). Each clone was planted in competition with one of the others in all possible combinations with three replicates in 45‐L pots. Upon harvest, the identity of 21 shoots sampled per pot was revealed by flow cytometry and DNA analysis. Differences in performance were examined using relative proportions of shoots of each clone, ratios of their aboveground biomass, and relative yield total (RYT). The performance of the clones in competition primarily depended on the clone status (native vs. invasive). Measured in terms of shoot number or aboveground biomass, the strongest signal observed was that North American native clones always lost in competition to the other two groups. In addition, North American native clones were suppressed by European natives to a similar degree as by North American invasives. North American invasive clones had the largest average shoot biomass, but only by a limited, nonsignificant difference due to genome size. There was no effect of ploidy on competition. Since the North American invaders of European origin are able to outcompete the native North American clones, we suggest that their high competitiveness acts as an important driver in the early stages of their invasion

Participación argentina en Naciones Unidas durante los gobiernos radical y menemista, 1983-1997

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The value of repetitive sequences in chloroplast DNA for phylogeographic inference: A comment on Vachon & Freeland 2011

In a recent Technical Advance article, Vachon and Freeland (2011, Molecular Ecology Resources, 11, 279-285.) evaluate the utility of repetitive and non-repetitive variation in the chloroplast genome for phylogeographic inference, using variation in Phragmites australis as an example. While we agree that repetitive and nonrepetitive regions evolve at different rates and homoplasy can impact results, we disagree with the conclusion that repetitive regions are inappropriate for large-scale phylogeographic studies. Here we describe limitations to the study dataset and analysis, and provide an alternative viewpoint on the utility of repetitive regions for phylogeographic studies. \ua9 2012 Blackwell Publishing Ltd

Phylogeography reveals a potential cryptic invasion in the Southern Hemisphere of Ceratophyllum demersum, New Zealand's worst invasive macrophyte

Ceratophyllum demersum (common hornwort) is presently considered the worst invasive submerged aquatic macrophyte in New Zealand. We explored the global phylogeographic pattern of the species, based on chloroplast and nuclear DNA, in order to identify the origin of the invasive populations in New Zealand and to clarify if there were multiple introductions. The phylogeographic study identified geographically differentiated gene pools in North America, tropical Asia, Australia, and South Africa, likely native to these regions, and a recent dispersal event of a Eurasian-related haplotype to North America, New Zealand, Australia, and South Africa. At least two different invasive genotypes of this Eurasian-related haplotype have been found in New Zealand. One genotype is closely related to genotypes in Australia and South Africa, while we could not trace the closest relatives of the other genotype within our C. demersum sample set. Contrasting spectra of genetic distances in New Zealand and in a region within the native range (Denmark), suggest that the invasive population was founded by vegetative reproduction, seen as low genetic distances among genotypes. We also discovered the introduction of the same Eurasian-related haplotype in Australia and South Africa and that a cryptic invasion may be occurring in these continents

Phenotypic traits of phragmites australis clones are not related to ploidy level and distribution range

Background and aims: Phragmites australis is a wetland grass with high genetic variability, augmented by its cosmopolitan distribution, clonal growth form and large variation in chromosome numbers. Different ploidy levels and ecotypes differ in morphology and ecophysiological traits, and may possess different levels of phenotypic variation. The aim of this study was to quantify the natural variation in ecophysiological characteristics of P. Australis, and to explore whether differences in ecophysiological traits can be related to ploidy levels or to the geographic origin of the clones. Methodology: Fifteen clones of P. australis from Europe and Asia/Australia, representing five ploidy levels (4x, 6x, 8x, 10x and 12x), were grown in a common garden design for 119 days. Plant growth and light-saturated rate of photosynthesis (Pmax), stomatal conductance (gs), water use efficiency (WUE) and concentrations of photosynthetic pigments and mineral ions in the leaves were measured. Principal results: The growth of the plants and most ecophysiological parameters differed significantly between clones. The mean maximum shoot height varied from 0.9 to 1.86 m, Pmax from 9.7 to 27 \u3bcmol m-2 s-1, gs from 0.22 to 1.41 mol m-2s-1 and WUE from 13 to 47 \u3bcmol mol-1. The concentrations of chlorophylls did not vary significantly between clones, but the chlorophyll a/b ratio and the concentrations of total carotenoids did. The observed differences were not explained either by the ploidy level per se or by the geographic origin or phylogenetic relationships of the clones. Conclusions: Phylogeographic relationships in P. australis on a global scale do not mirror the environment where the adaptations have evolved, and high phenotypic variation among and within clones complicates comparative studies. Future studies aimed at explaining differences in plant behaviour between P. australis populations should be careful in the selection of target genotypes and/or populations, and should avoid generalizing their findings beyond the genotypes and/or populations studied. \ua9 The Authors 2012

Herbarium specimens as a source of DNA for AFLP fingerprinting of Phragmites (Poaceae): Possibilities and limitations

Herbarium collections are a valuable source of genetic information. Even though the DNA obtained from the specimens is often highly fragmented and present in small quantities, it has been successfully used particularly for DNA sequencing and microsatellite analysis. The present study shows that the quality is often sufficient for use also for AFLPs. With this technique, a considerable number of DNA fragments with unknown sequence from the entire genome of the plant are amplified, often with the purpose of phylogeographic studies or analyses of interrelationships of closely related species. In order to avoid the effects of potential artefacts resulting from DNA degradation, such as "false polymorphisms", it is suggested that fresh samples should always be included for comparison, and that AFLP chromatograms based on herbarium specimens should be included in analyses only when they contain AFLP fragments monomorphic among the fresh samples, and when signal quality is comparable to that of fresh samples. \ua9 2008 Springer-Verlag

Clone-specific differences in Phragmites australis: Effects of ploidy level and geographic origin

Phragmites australis (Cav.) Trin. ex Steud. is virtually cosmopolitan and shows substantial variation in euploidy level and morphology. The aim of this study was to assess clone-specific differences in morphological, anatomical, physiological and biochemical traits of P. australis as affected by the geographic origin, the euploidy level (4x, 6x, 8x and 12x), and to assess differences between native and introduced clones in North America. Growth, morphology, photosynthetic characteristics, photosynthetic pigments and enzymes were measured on 11 geographically distinct clones propagated in a common environment in Denmark. Any differences between the measured parameters were caused by genetic differences between clones. Overall, the largest differences between clones were found in ontogeny, shoot morphology and leaf anatomy. The North Swedish clone was adapted to short growing seasons and sprouted very early in the spring but senesced early in July. In contrast, clones from southern regions were adapted to warmer and longer growing seasons and failed to complete the whole growth-cycle in Denmark. Some clones from oceanic habitats with climatic conditions that do not differ much from conditions at the Danish growth site did flower in the common environment. The octoploid genotype in general had larger dimensions of leaves, taller and thicker shoots and larger cell sizes than did the hexaploid and tetraploid clones. The dodecaploid clone was neither bigger than the octoploid, nor significantly different from tetraploid and hexaploid clones in most of the morphological characters observed. Stomatal density decreased with increasing ploidy level, while length of guard cells increased. Tetraploid clones generally had morphometric dimensions, similar to hexaploids. Hence, polyploidy did not always result in an increase in plant size, probably because the number of cell divisions during development is reduced. Four North American clones were included in the study. The clone from the Atlantic Coast and the supposed invasive European clone resembled each other. The Gulf Coast clone differed from the rest of the clones in having leaf characters resembling Phragmites mauritianus Kunth. Thus, morphological characters are not unmistakable parameters that can be used to discriminate between introduced and native clones. The physiological and biochemical processes also differed between clones, but these processes showed considerable phenotypic plasticity and were therefore very difficult to evaluate conclusively. It is concluded that P. australis is a species with very high genetic variability which is augmented by its cosmopolitan distribution, clonal growth form and the large variation in chromosome numbers. It is therefore not surprising that large genetically determined differences in ontogeny, shoot morphology and leaf anatomy occur between clones. \ua9 2006 Elsevier B.V. All rights reserved