Data for Figure 2 (part 1)

Data for Figure 2 (part 1

Code for Figure 1

Code to reproduce Figure

Code for Figure 3

Written as a knitr dynamic document, contains both code and documentation

Data for Figure 2 (part 2)

Data for figure 2 (part 2), see README.Rm

Code to replicate the analysis and generate Figure 1

A dynamic document for running the analysis and generating the data and graphs shown in Figure 1. After installing the packages indicated, this code can be run by copy-pasting the code blocks into any R terminal, or compiled at once by running `knit("Figure1.Rmd")` in the R terminal using the knitr package

Code for Figure 2

Written as a knitr dynamic document, contains both code and documentation

Data for Figure 3 (part 1)

See READM

CSV files for figures

All data tables used to generate figures as CSV files by figure name. (20 files, 13 MB). Note, all data are from simulations, not true observations, and can also be re-generated by running the code provided. See corresponding code blocks of Manuscript.Rmd and Supplement.Rmd for details

supplement source .Rmd

A plain-text (.Rmd) file containing all code run in the supplement, together with descriptions

pmc

An R package containing functions to perform the method described in the package, manual for these functions, and a vignette demonstrating how the package is used to replicate the results of this study