Comparison of saturated areas mapping methods in the Jizera Mountains, Czech Republic

Understanding and modelling the processes of flood runoff generation is still a challenge in catchment hydrology. In particular, there are issues about how best to represent the effects of the antecedent state of saturation of a catchment on runoff formation and flood hydrographs. This paper reports on the experience of mapping saturated areas using measured water table by piezometers and more qualitative assessments of the state of the moisture at soil surface or immediately under it to provide information that can usefully condition model predictions. Vegetation patterns can also provide useful indicators of runoff source areas, but integrated over much longer periods of time. In this way, it might be more likely that models will get the right predictions for the right reasons

Immobilized inocula of white-rot fungi accelerate both detoxification and organic matter transformation in two-phase dry olive-mill residue

The potential use for agronomic purposes of dry olive-mill residue (DOR), solid waste from the olive oil two-phase extraction process, might be impaired by its phytotoxicity. Although fungal treatments can detoxify DOR, long times are required for these processes. The objective of this study was to assess whether the addition of immobilized fungal inocula to DOR might improve colonization rates, thus reducing the time necessary for its detoxification and bioconversion. Inocula of Panus tigrinus CBS 577.79 and Phlebia sp. DABAC 9 immobilized on either chopped maize stalks or polyurethane sponge (PS) led to higher removals of both phenols and phytotoxicity from DOR than free inocula after 4 weeks of incubation. Best dephenolization (85%) was with PS-immobilized Phlebia sp., the use of which reduced germinability inhibition of Lepidium sativum and Lactuca sativa by 80 and 71.4%, respectively. Regardless of the type of inoculant, a low degree of humification was obtained

USING THE AUTOMATIC VECTORISATION METHOD IN GENERATING THE VECTOR ALTIMETRY OF THE HISTORICAL VLTAVA RIVER VALLEY

The article describes, in detail, the generation procedure of vector altimetry of an upper and middle course of the Vltava River historical valley. By the historical valley, the shape of the river valley before the construction of dams on the Vltava River in the second half of the 20th century is understood. The vector altimetry will serve as the base for creating a 3D model of this valley. The initial input data were old maps, specifically scanned first-edition prints of the State Map 1 : 5 000 - Derived (SMO-5). By combining automatic and manual vectorisation, the altimetry component of these maps (contour lines and spot elevations) will be converted to a vector format. Individual processing steps, including the description of automatic vectorisation in the ArcScan extension to the ArcGIS system, together with examples of the results, are presented in the text below

Influence of Replacement Used Reference Coordinate System for Georeferencing of the Old Map of Europe

The article describes the effect of the replacement of the used reference coordinate system in the georeferencing of an old map of Europe. The map was georeferenced into three types of projection – the equal-area conic (original cartographic projection), cylindrical Plate Carrée and cylindrical Mercator map projection. The map was georeferenced by means of the affine and the second-order polynomial transformation. The resulting georeferenced raster datasets from the Plate Carrée and Mercator projection were projected into the equal-area conic projection by means of projection equations. The output is the comparison of drawn graphics, the magnitude of standard deviations for individual projections and types of transformation

Microbial communities in local and transplanted soils along a latitudinal gradient

Factors shaping community structure of soil microbiota have been intensively studied; however, the pattern in community composition and structure of soil microbiota at large geographical scales and factors regulating its metabolic activity remains poorly understood. Here, we used a field transplantation experiments to investigate the effects of substrate and climatic conditions on basal soil respiration, microbial biomass C and diversity of soil microbiota by comparing local and transplanted soils along a latitudinal gradient. Soil samples collected in April 2008 at donor site (Sokolov, Czech Republic) in Central Europe were gamma-ray sterilized and transplanted to receptor sites in Europe and the USA in May and early June 2008. Soil samples were taken in June 2009 after one year of exposure and immediately prepared for laboratory analysis. Basal soil respiration in local soils increased from 22 to 42 mg CO2-C kg-1 h-1 with latitude while basal soil respiration in transplanted soils decreased with latitude from 32 to 19 mg CO2-C kg-1 h-1. The microbial biomass C in both transplanted and local soils decreased with latitude. Content of fungal and bacterial phospholipid fatty acids increased nearly twice with latitude in local soils. Shannon diversity index of fungal community decreased from 2.5 to 1.2 along the latitudinal gradient in transplanted soils while local soils increased from 0.9 to 2.4 with latitude. Based on our results, microbial activity is driven mainly by changes of the soil substrate along latitudinal and climatic gradients while microbial biomass is driven more by global climatic factors itself. The diversity of soil microbial communities is mostly affected by latitudinal and climatic factors while community structure is mostly shaped by substrate quality

Novel PCB-degrading Rhodococcus strains able to promote plant growth for assisted rhizoremediation of historically polluted soils

Extended soil contamination by polychlorinated biphenyls (PCBs) represents a global environmental issue that can hardly be addressed with the conventional remediation treatments. Rhizoremediation is a sustainable alternative, exploiting plants to stimulate in situ the degradative bacterial communities naturally occurring in historically polluted areas. This approach can be enhanced by the use of bacterial strains that combine PCB degradation potential with the ability to promote plant and root development. With this aim, we established a collection of aerobic bacteria isolated from the soil of the highly PCB-polluted site \u201cSIN Brescia-Caffaro\u201d (Italy) biostimulated by the plant Phalaris arundinacea. The strains, selected on biphenyl and plant secondary metabolites provided as unique carbon source, were largely dominated by Actinobacteria and a significant number showed traits of interest for remediation, harbouring genes homologous to bphA, involved in the PCB oxidation pathway, and displaying 2,3-catechol dioxygenase activity and emulsification properties. Several strains also showed the potential to alleviate plant stress through 1-aminocyclopropane-1-carboxyl-ate deaminase activity. In particular, we identified three Rhodococcus strains able to degrade in vitro several PCB congeners and to promote lateral root emergence in the model plant Arabidopsis thaliana in vivo. In addition, these strains showed the capacity to colonize the root system and to increase the plant biomass in PCB contaminated soil, making them ideal candidates to sustain microbial-assisted PCB rhizoremediation through a bioaugmentation approach

Tree diversity and species identity effects on soil fungi, protists and animals are context dependent

Plant species richness and the presence of certain influential species (sampling effect) drive the stability and functionality of ecosystems as well as primary production and biomass of consumers. However, little is known about these floristic effects on richness and community composition of soil biota in forest habitats owing to methodological constraints. We developed a DNA metabarcoding approach to identify the major eukaryote groups directly from soil with roughly species-level resolution. Using this method, we examined the effects of tree diversity and individual tree species on soil microbial biomass and taxonomic richness of soil biota in two experimental study systems in Finland and Estonia and accounted for edaphic variables and spatial autocorrelation. Our analyses revealed that the effects of tree diversity and individual species on soil biota are largely context dependent. Multiple regression and structural equation modelling suggested that biomass, soil pH, nutrients and tree species directly affect richness of different taxonomic groups. The community composition of most soil organisms was strongly correlated due to similar response to environmental predictors rather than causal relationships. On a local scale, soil resources and tree species have stronger effect on diversity of soil biota than tree species richness per se