Measurement in biological systems from the self-organisation point of view

Measurement in biological systems became a subject of concern as a consequence of numerous reports on limited reproducibility of experimental results. To reveal origins of this inconsistency, we have examined general features of biological systems as dynamical systems far from not only their chemical equilibrium, but, in most cases, also of their Lyapunov stable states. Thus, in biological experiments, we do not observe states, but distinct trajectories followed by the examined organism. If one of the possible sequences is selected, a minute sub-section of the whole problem is obtained, sometimes in a seemingly highly reproducible manner. But the state of the organism is known only if a complete set of possible trajectories is known. And this is often practically impossible. Therefore, we propose a different framework for reporting and analysis of biological experiments, respecting the view of non-linear mathematics. This view should be used to avoid overoptimistic results, which have to be consequently retracted or largely complemented. An increase of specification of experimental procedures is the way for better understanding of the scope of paths, which the biological system may be evolving. And it is hidden in the evolution of experimental protocols.Comment: 13 pages, 5 figure

Space-time evolution induced by spinor fields with canonical and non-canonical kinetic terms

We study spinor field theories as an origin to induce space-time evolution. Self-interacting spinor fields with canonical and non-canonical kinetic terms are considered in a Friedman-Robertson-Walker universe. The deceleration parameter is calculated by solving the equation of motion and the Friedman equation, simultaneously. It is shown that the spinor fields can accelerate and decelerate the universe expansion. To construct realistic models we discuss the contributions from the dynamical symmetry breaking.Comment: 16 pages, 19 figure

Gravitational lensing by a charged black hole of string theory

We study gravitational lensing by the Gibbons-Maeda-Garfinkle-Horowitz-Strominger (GMGHS) charged black hole of heterotic string theory and obtain the angular position and magnification of the relativistic images. Modeling the supermassive central object of the galaxy as a GMGHS black hole, we estimate the numerical values of different strong-lensing parameters. We find that there is no significant string effect present in the lensing observables in the strong-gravity scenario.Comment: 6 page

Instantons and radial excitations in attractive Bose-Einstein condensates

Imaginary- and real-time versions of an equation for the condensate density are presented which describe dynamics and decay of any spherical Bose-Einstein condensate (BEC) within the mean field appraoch. We obtain quantized energies of collective finite amplitude radial oscillations and exact numerical instanton solutions which describe quantum tunneling from both the metastable and radially excited states of the BEC of 7Li atoms. The mass parameter for the radial motion is found different from the gaussian value assumed hitherto, but the effect of this difference on decay exponents is small. The collective breathing states form slightly compressed harmonic spectrum, n=4 state lying lower than the second Bogolyubov (small amplitude) mode. The decay of these states, if excited, may simulate a shorter than true lifetime of the metastable state. By scaling arguments, results extend to other attractive BEC-s.Comment: 6 pages, 3 figure

Bosonic D-branes at finite temperature with an external field

Bosonic boundary states at finite temperature are constructed as solutions of boundary conditions at $T\neq 0$ for bosonic open strings with a constant gauge field $F_{ab}$ coupled to the boundary. The construction is done in the framework of thermo field dynamics where a thermal Bogoliubov transformation maps states and operators to finite temperature. Boundary states are given in terms of states from the direct product space between the Fock space of the closed string and another identical copy of it. By analogy with zero temperature, the boundary states heve the interpretation of $Dp$-brane at finite temperature. The boundary conditions admit two different solutions. The entropy of the closed string in a $Dp$-brane state is computed and analysed. It is interpreted as the entropy of the $Dp$-brane at finite temperature.Comment: 21 pages, Latex, revised version with minor corrections and references added, to be published in Phys. Rev.

Geometric Entropy of Nonrelativistic Fermions and Two Dimensional Strings

We consider the geometric entropy of free nonrelativistic fermions in two dimensions and show that it is ultraviolet finite for finite fermi energies, but divergent in the infrared. In terms of the corresponding collective field theory this is a {\em nonperturbative} effect and is related to the soft behaviour of the usual thermodynamic entropy at high temperatures. We then show that thermodynamic entropy of the singlet sector of the one dimensional matrix model at high temperatures is governed by nonperturbative effects of the underlying string theory. In the high temperature limit the ``exact'' expression for the entropy is regular but leads to a negative specific heat, thus implying an instability. We speculate that in a properly defined two dimensional string theory, the thermodynamic entropy could approach a constant at high temperatures and lead to a geometric entropy which is finite in the ultraviolet.Comment: LaTex, 19 pages, no figures. Some references adde

Scalar Solitons on the Fuzzy Sphere

We study scalar solitons on the fuzzy sphere at arbitrary radius and noncommutativity. We prove that no solitons exist if the radius is below a certain value. Solitons do exist for radii above a critical value which depends on the noncommutativity parameter. We construct a family of soliton solutions which are stable and which converge to solitons on the Moyal plane in an appropriate limit. These solutions are rotationally symmetric about an axis and have no allowed deformations. Solitons that describe multiple lumps on the fuzzy sphere can also be constructed but they are not stable.Comment: 24 pages, 2 figures, typo corrected and stylistic changes. v3: reference adde

Convenient Versus Unique Effective Action Formalism in 2D Dilaton-Maxwell Quantum Gravity

The structure of one-loop divergences of two-dimensional dilaton-Maxwell quantum gravity is investigated in two formalisms: one using a convenient effective action and the other a unique effective action. The one-loop divergences (including surface divergences) of the convenient effective action are calculated in three different covariant gauges: (i) De Witt, (ii) $\Omega$-degenerate De Witt, and (iii) simplest covariant. The on-shell effective action is given by surface divergences only (finiteness of the $S$-matrix), which yet depend upon the gauge condition choice. Off-shell renormalizability is discussed and classes of renormalizable dilaton and Maxwell potentials are found which coincide in the cases of convenient and unique effective actions. A detailed comparison of both situations, i.e. convenient vs. unique effective action, is given. As an extension of the procedure, the one-loop effective action in two-dimensional dilaton-Yang-Mills gravity is calculated.Comment: 25 pages, LaTeX file, HUPD-93-0

On the covariant quantization of tensionless bosonic strings in AdS spacetime

The covariant quantization of the tensionless free bosonic (open and closed) strings in AdS spaces is obtained. This is done by representing the AdS space as an hyperboloid in a flat auxiliary space and by studying the resulting string constrained hamiltonian system in the tensionless limit. It turns out that the constraint algebra simplifies in the tensionless case in such a way that the closed BRST quantization can be formulated and the theory admits then an explicit covariant quantization scheme. This holds for any value of the dimension of the AdS space.Comment: 1+16 pages; v4 two clarifications adde

Abelian Higgs Hair for Electrically Charged Dilaton Black Holes

It is argued that an electronically charged dilaton black hole can support a long range field of a Nielsen-Olesen string. Combining both numerical and perturbative techniques we examine the properties of an Abelian-Higgs vortex in the presence of the black hole under consideration. Allowing the black hole to approach extremality we found that all fields of the vortex are expelled from the extreme black hole. In the thin string limit we obtained the metric of a conical electrically charged dilaton black hole. The effect of the vortex can be measured from infinity justifying its characterization as black hole hair.Comment: 13 pages, 14 figures, Revtex, to appear in Phys.Rev.D1