Responses of mRNA expression of PepT1 in small intestine to graded duodenal soybean small peptides infusion in lactating goats

To study the effect of circulation small peptides concentration on mRNA expression in small intestine, graded amount of soybean small peptides (SSP) were infused into lactating goats through duodenal fistulas. Peptide-bound amino acid (PBAA) concentration in arterial plasma and the mRNA expression of PepT1 was detected in the current study. The results showed that concentrations of all peptidebound amino acids (PBAA) increased and the activity of PepT1 in duodenum tissue was enhanced by SSP infusion. The PepT1expression in duodenum tissue was significantly increased with the increment of amounts of SSP infusion (

Genome-Wide DNA Polymorphism Analysis and Molecular Marker Development for the Setaria italica Variety “SSR41” and Positional Cloning of the Setaria White Leaf Sheath Gene SiWLS1

Genome-wide DNA polymorphism analysis and molecular marker development are important for forward genetics research and DNA marker-assisted breeding. As an ideal model system for Panicoideae grasses and an important minor crop in East Asia, foxtail millet (Setaria italica) has a high-quality reference genome as well as large mutant libraries based on the “Yugu1” variety. However, there is still a lack of genetic and mutation mapping tools available for forward genetics research on S. italica. Here, we screened another S. italica genotype, “SSR41”, which is morphologically similar to, and readily cross-pollinates with, “Yugu1”. High-throughput resequencing of “SSR41” identified 1,102,064 reliable single nucleotide polymorphisms (SNPs) and 196,782 insertions/deletions (InDels) between the two genotypes, indicating that these two genotypes have high genetic diversity. Of the 8,361 high-quality InDels longer than 20 bp that were developed as molecular markers, 180 were validated with 91.5% accuracy. We used “SSR41” and these developed molecular markers to map the white leaf sheath gene SiWLS1. Further analyses showed that SiWLS1 encodes a chloroplastlocalized protein that is involved in the regulation of chloroplast development in bundle sheath cells in the leaf sheath in S. italica and is related to sensitivity to heavy metals. Our study provides the methodology and an important resource for forward genetics research on Setaria

Spatiotemporal Fluctuation Induced Transition in a Tumor Model with Immune Surveillance

We report on a simple model of spatial extend anti-tumor system with a fluctuation in growth rate, which can undergo a nonequilibrium phase transition. Three states as excited, sub-excited and non-excited states of a tumor are defined to describe its growth. The multiplicative noise is found to be double-face: The positive effect on a non-excited tumor and the negative effect on an excited tumor.Comment: 8pages,5figure

Time-optimal rotation of a spin 1/2: application to the NV center spin in diamond

We study the applicability of the time optimal bang-bang control designed for spin-1/2 [U. Boscain and P. Mason, J. Math. Phys. {\bf 47}, 062101 (2006)] to the rotation of the electron spin of a nitrogen-vacancy (NV) center in diamond. The spin of the NV center is a three-level system, with two levels forming a relevant qubit subspace where the time-varying magnetic control field performs rotation, and the third level being idle. We find that the bang-bang control protocol decreases the rotation time by 20--25% in comparison with the traditional oscillating sinusoidal driving. We also find that for most values of the bias field the leakage to the idle level is very small, so that the NV center is a suitable testbed for experimental study of the time-optimal protocols. For some special values of the bias field, however, the unwanted leakage is greatly increased. We demonstrate that this is caused by the resonance with higher-order Fourier harmonics of the bang-bang driving field.Comment: 6 pages, 4 figure

Stability of Excited Dressed States with Spin-Orbit Coupling

We study the decay behaviors of ultracold atoms in metastable states with spin-orbit coupling (SOC), and demonstrate that there are two SOC-induced decay mechanisms. One arises from the trapping potential and the other is due to interatomic collision. We present general schemes for calculating decay rates from these two mechanisms, and illustrate how the decay rates can be controlled by experimental parameters.We experimentally measure the decay rates over a broad parameter region, and the results agree well with theoretical calculations. This work provides an insight for both quantum simulation involving metastable dressed states and studies on few-body problems with SO coupling.Comment: 4.5 pages, 4 figures, the latest versio

The effect of different baryons impurities

We demonstrate the different effect of different baryons impurities on the static properties of nuclei within the framework of the relativistic mean-field model. Systematic calculations show that $\Lambda_c^+$ and $\Lambda_b$ has the same attracting role as $\Lambda$ hyperon does in lighter hypernuclei. $\Xi^-$ and $\Xi_c^0$ hyperon has the attracting role only for the protons distribution, and has a repulsive role for the neutrons distribution. On the contrary, $\Xi^0$ and $\Xi^+_c$ hyperon attracts surrounding neutrons and reveals a repulsive force to the protons. We find that the different effect of different baryons impurities on the nuclear core is due to the different third component of their isospin.Comment: 9 page

The C-terminal motif of SiAGO1b is required for the regulation of growth, development and stress responses in foxtail millet (\u3ci\u3eSetaria italica\u3c/i\u3e (L.) P. Beauv)

Foxtail millet (Setaria italica (L.) P. Beauv), which belongs to the Panicoideae tribe of the Poaceae, is an important grain crop widely grown in Northern China and India. It is currently developing into a novel model species for functional genomics of the Panicoideae as a result of its fully available reference genome sequence, small diploid genome (2n=18, ~510 Mb), short life cycle, small stature and prolific seed production. Argonaute 1 (AGO1), belonging to the argonaute (AGO) protein family, recruits small RNAs and regulates plant growth and development. Here, we characterized an AGO1 mutant (siago1b) in foxtail millet, which was induced by ethyl methanesulfonate treatment. The mutant exhibited pleiotropic developmental defects, including dwarfing stem, narrow and rolled leaves, smaller panicles and lower rates of seed setting. Map-based cloning analysis demonstrated that these phenotypic variations were attributed to a C–A transversion, and a 7-bp deletion in the C-terminus of the SiAGO1b gene in siago1b. Yeast two-hybrid assays and BiFC experiments revealed that the mutated region was an essential functional motif for the interaction between SiAGO1b and SiHYL1. Furthermore, 1598 differentially expressed genes were detected via RNAseq- based comparison of SiAGO1b and wild-type plants, which revealed that SiAGO1b mutation influenced multiple biological processes, including energy metabolism, cell growth, programmed death and abiotic stress responses in foxtail millet. This study may provide a better understanding of the mechanisms by which SiAGO1b regulates the growth and development of crops

The C-terminal motif of SiAGO1b is required for the regulation of growth, development and stress responses in foxtail millet (\u3ci\u3eSetaria italica\u3c/i\u3e (L.) P. Beauv)

Foxtail millet (Setaria italica (L.) P. Beauv), which belongs to the Panicoideae tribe of the Poaceae, is an important grain crop widely grown in Northern China and India. It is currently developing into a novel model species for functional genomics of the Panicoideae as a result of its fully available reference genome sequence, small diploid genome (2n=18, ~510 Mb), short life cycle, small stature and prolific seed production. Argonaute 1 (AGO1), belonging to the argonaute (AGO) protein family, recruits small RNAs and regulates plant growth and development. Here, we characterized an AGO1 mutant (siago1b) in foxtail millet, which was induced by ethyl methanesulfonate treatment. The mutant exhibited pleiotropic developmental defects, including dwarfing stem, narrow and rolled leaves, smaller panicles and lower rates of seed setting. Map-based cloning analysis demonstrated that these phenotypic variations were attributed to a C–A transversion, and a 7-bp deletion in the C-terminus of the SiAGO1b gene in siago1b. Yeast two-hybrid assays and BiFC experiments revealed that the mutated region was an essential functional motif for the interaction between SiAGO1b and SiHYL1. Furthermore, 1598 differentially expressed genes were detected via RNAseq- based comparison of SiAGO1b and wild-type plants, which revealed that SiAGO1b mutation influenced multiple biological processes, including energy metabolism, cell growth, programmed death and abiotic stress responses in foxtail millet. This study may provide a better understanding of the mechanisms by which SiAGO1b regulates the growth and development of crops

An Empirical Approach to the Bond Additivity Model in Quantitative Interpretation of Sum Frequency Generation Vibrational Spectra

A complete empirical approach from known Raman and IR spectra is used to make corrections to the bond additivity model for quantitative interpretation of Sum Frequency generation Vibrational Spectra (SFG-VS) from molecular interfaces. This empirical correction successfully addresses the failures of the simple bond additivity model. This empirical approach not only provides new understandings of the effectiveness and limitations of the bond additivity model, but also provides a practical roadmap for its application in SFG-VS studies of molecular interfaces