Site-saturation studies of β-lactamase: Production and characterization of mutant β-lactamases with all possible amino acid substitutions at residue 71

A mutagenic technique that "saturates" a particular site in a protein with all possible amino acid substitutions was used to study the role of residue 71 in β-lactamase (EC 3.5.2.6). Threonine is conserved at residue 71 in all class A β-lactamases and is adjacent to the active site Ser-70. All 19 mutants of the enzyme were characterized by the penam and cephem antibiotic resistance they provided to Escherichia coli LS1 cells. Surprisingly, cells producing any of 14 of the mutant β-lactamases displayed appreciable resistance to ampicillin; only cells with mutants having Tyr, Trp, Asp, Lys, or Arg at residue 71 had no observable resistance to ampicillin. However, the mutants are less stable to cellular proteases than wild-type enzyme is. These results suggest that Thr-71 is not essential for binding or catalysis but is important for stability of the β-lactamase protein. An apparent change in specificity indicates that residue 71 influences the region of the protein that accommodates the side chain attached to the β-lactam ring of the substrate

Comment on ‘Tumour-infiltrating inflammation and prognosis in colorectal cancer: systematic review and meta-analysis’

No abstract available

Meson-meson interactions -- from static to dynamic valence quarks

A method for the extraction of an effective meson-meson potential from Green functions, which can be obtained from a lattice simulation, is presented. Simulations are carried out for compact QED and QCD in four dimensions using the quenched approximation and the hopping parameter expansion. In a further study, a heavy-light meson is considered employing a conjugate gradient algorithm for the light propagators. Due to the Pauli exclusion principle, the results for QED indicate the existence of a hard core, but for QCD there is strong attraction at small meson distances.Comment: 4 pages, uuencoded gziped postscript file, contribution to LATTICE'95, Melbourne, Australia (list of authors completed

A common-mesocosm experiment recreates sawgrass (Cladium jamaicense) phenotypes from Everglades marl prairies and peat marshes

PREMISE: The southern Florida Everglades landscape sustains wetlands of national and international importance. Sawgrass (Cladium jamaicense), the dominant macrophyte in the Everglades, has two phenotypes that vary in size and density between Everglades marl prairies and peat marshes. Marl prairies have recently been hypothesized to be a newly formed habitat developed after European colonization as a result of landscape-scale hydrologic modifications, implying that sawgrass marl phenotypes developed in response to the marl habitat. We examined whether sawgrass wetland phenotypes are plastic responses to marl and peat soils. METHODS: In a common-mesocosm experiment, seedlings from a single Everglades population were grown outdoors in field-collected marl or peat soils. Growth and morphology of plants were measured over 14 mo, while soil and leaf total nitrogen, total phosphorus, total carbon, and plant biomass and biomass allocation were determined in a final harvest. RESULTS: Sawgrass plant morphology diverged in marl vs. peat soils, and variations in morphology and density of mesocosm-grown plants resembled differences seen in sawgrass plants growing in marl and peat habitats in Everglades wetlands. Additionally, sawgrass growing in marl made abundant dauciform roots, while dauciform root production of sawgrass growing in peat was correlated with soil total phosphorus. CONCLUSIONS: Sawgrass from a single population grown in marl or peat soils can mimic sawgrass phenotypes associated with marl vs. peat habitats. This plasticity is consistent with the hypothesis that Everglades marl prairies are relatively new habitats that support plant communities assembled after European colonization and subsequent landscape modifications

Evaluation of a tumor microenvironment-based prognostic score in primary operable colorectal cancer

Purpose: The tumor microenvironment is recognized as an important determinant of progression and outcome in colorectal cancer. The aim of the present study was to evaluate a novel tumor microenvironment–based prognostic score, based on histopathologic assessment of the tumor inflammatory cell infiltrate and tumor stroma, in patients with primary operable colorectal cancer. Experimental Design: Using routine pathologic sections, the tumor inflammatory cell infiltrate and stroma were assessed using Klintrup–Mäkinen (KM) grade and tumor stroma percentage (TSP), respectively, in 307 patients who had undergone elective resection for stage I–III colorectal cancer. The clinical utility of a cumulative score based on these characteristics was examined. Results: On univariate analysis, both weak KM grade and high TSP were associated with reduced survival (HR, 2.42; P = 0.001 and HR, 2.05; P = 0.001, respectively). A cumulative score based on these characteristics, the Glasgow Microenvironment Score (GMS), was associated with survival (HR, 1.93; 95% confidence interval, 1.36–2.73; P < 0.001), independent of TNM stage and venous invasion (both P < 0.05). GMS stratified patients in to three prognostic groups: strong KM (GMS = 0), weak KM/low TSP (GMS = 1), and weak KM/high TSP (GMS = 2), with 5-year survival of 89%, 75%, and 51%, respectively (P < 0.001). Furthermore, GMS in combination with node involvement, venous invasion, and mismatch repair status further stratified 5-year survival (92% to 37%, 93% to 27%, and 100% to 37%, respectively). Conclusions: The present study further confirms the clinical utility of assessment of the tumor microenvironment in colorectal cancer and introduces a simple, routinely available prognostic score for the risk stratification of patients with primary operable colorectal cancer

An advanced 10.6-micro laser communication experiment

Carbon dioxide laser capability of high data rate intersatellite communicatio

Some scientific investigations affecting Queensland

The University of Queensland Department of Geology Papers was primarily a medium for publication of original research work conducted by staff members and postgraduate students of the Department of Geology and Mineralogy at UQ. Contributions from others, particularly on aspects of Queensland geology, were also published. Frequency: Irregular. Some early issues have New series in numbering. The publication was continued by Papers (University of Queensland. Department of Earth Sciences) from Vol. 12 no. 4, 1992

Photometric study of southern SU UMa-type dwarf novae and candidates -- III: NSV 10934, MM Sco, AB Nor, CAL 86

We photometrically observed four southern dwarf novae in outburst (NSV 10934, MM Sco, AB Nor and CAL 86). NSV 10934 was confirmed to be an SU UMa-type dwarf nova with a mean superhump period of 0.07478(1) d. This star also showed transient appearance of quasi-periodic oscillations (QPOs) during the final growing stage of the superhumps. Combined with the recent theoretical interpretation and with the rather unusual rapid terminal fading of normal outbursts, NSV 10934 may be a candidate intermediate polar showing SU UMa-type properties. The mean superhump periods of MM Sco and AB Nor were determined to be 0.06136(4) d and 0.08438(2) d, respectively. We suggest that AB Nor belongs to a rather rare class of long-period SU UMa-type dwarf novae with low mass-transfer rates. We also observed an outburst of the suspected SU UMa-type dwarf nova CAL 86. We identified this outburst as a normal outburst and determined the mean decline rate of 1.1 mag/d.Comment: 13 pages, 23 figures, to appear in MNRAS. For more information, see http://www.kusastro.kyoto-u.ac.jp/vsnet