DNA-decorated graphene chemical sensors

Graphene is a true two dimensional material with exceptional electronic properties and enormous potential for practical applications. Graphene's promise as a chemical sensor material has been noted but there has been relatively little work on practical chemical sensing using graphene, and in particular how chemical functionalization may be used to sensitize graphene to chemical vapors. Here we show one route towards improving the ability of graphene to work as a chemical sensor by using single stranded DNA as a sensitizing agent. The resulting broad response devices show fast response times, complete and rapid recovery to baseline at room temperature, and discrimination between several similar vapor analytes.Comment: 7 pages, To appear in Applied Physics Letter

The effect of marine and non-marine phospholipid rich oils when fed to juvenile barramundi (Lates calcarifer)

An experiment was conducted to assess the response of juvenile barramundi (Lates calcarifer) to four diets containing either marine- or non-marine derived neutral lipid (NL) or polar lipid (PL) sources for eight weeks in a 2 × 2 factorial design. The four diets contained 8.2% added lipid composed of a 1% fish oil base with 7.2% test lipid (n - 3 NL: Fish oil, n - 3 PL: Krill oil, n - 6 NL: Soybean oil, n - 6 PL: Soybean lecithin). The results demonstrated that the different lipid sources (either n - 3 or n - 6 omega series from either NL or PL class) had significant effects on growth performance and feed utilisation with some interaction terms noted. Growth was negatively affected in the n - 6 NL fish and the feed conversion (FCR) was highest in the n - 6 PL fish. Digestibility of total lipid and some specific fatty acids (notably 18:2n - 6 and 18:3n - 3) were also negatively affected in the n - 6 PL fish. Analysis of the whole body neutral lipid fatty acid composition showed that these mirrored those of the diets and significant interaction terms were noted. However, the whole body polar lipid fatty acids appeared to be more tightly regulated in comparison. The blood plasma biochemistry and hepatic transcription of several fatty acid metabolism genes in the n - 6 PL fed and to a lesser extent in the n - 6 NL fed fish demonstrated a pattern consistent with modified metabolic function. These results support that there are potential advantages in using phospholipid-rich oils however there are clear differences in terms of their origin. Statement of relevance: Juvenile barramundi may benefit from dietary phospholipid. © 2016 Elsevier B.V

Fast and Effective Techniques for LWIR Radiative Transfer Modeling: A Dimension-Reduction Approach

The increasing spatial and spectral resolution of hyperspectral imagers yields detailed spectroscopy measurements from both space-based and airborne platforms. These detailed measurements allow for material classification, with many recent advancements from the fields of machine learning and deep learning. In many scenarios, the hyperspectral image must first be corrected or compensated for atmospheric effects. Radiative Transfer (RT) computations can provide look up tables (LUTs) to support these corrections. This research investigates a dimension-reduction approach using machine learning methods to create an effective sensor-specific long-wave infrared (LWIR) RT model

Comparison of faecal collection methods and diet acclimation times for the measurement of digestibility coefficients in barramundi (Lates calcarifer)

This study aimed to investigate the effects of two faecal collection methods (stripping and settlement) on the apparent digestibility coefficients (ADC) of dry matter, protein and energy of three different diets fed to barramundi. In a second experiment, the effect of acclimation time (i.e. number of days fed the diet) on the calculation of ADCs was also investigated. Each tank of fish was fed one of three diets for 12 days. Faeces were collected by both stripping and settlement, although only settlement was used prior to day seven of the acclimation period. Faeces were collected using the settlement method at regular intervals from day 1 to day 12. Comparisons between faecal collection methods were only made based on faecal material collected over a similar acclimation period. The collection of faeces by stripping produced more conservative ADCs, which were also more consistent than those obtained using the settlement technique. The calculated ADCs typically fluctuated for the first 3 days of collection before the variability diminished. Barramundi should be acclimated to diets for a minimum of 4 days before collection of faecal material, and collection by stripping is recommended to obtain the most reliable digestibility data

Fiddler crabs (Afruca tangeri) detect second-order motion in both intensity and polarization

Motion vision is vital for a wide range of animal behaviors. Fiddler crabs, for example, rely heavily on motion to detect the movement of avian predators. They are known to detect first-order motion using both intensity (defined by spatiotemporal correlations in luminance) and polarization information (defined separately as spatiotemporal correlations in the degree and/or angle of polarization). However, little is known about their ability to detect second-order motion, another important form of motion information; defined separately by spatiotemporal correlations in higher-order image properties. In this work we used behavioral experiments to test how fiddler crabs (Afruca tangeri) responded to both second-order intensity and polarization stimuli. Fiddler crabs responded to a number of different intensity based second-order stimuli. Furthermore, the crabs also responded to second-order polarization stimuli, a behaviorally relevant stimulus applicable to an unpolarized flying bird when viewed against a polarized sky. The detection of second-order motion in polarization is, to the best of our knowledge, the first demonstration of this ability in any animal. This discovery therefore opens a new dimension in our understanding of how animals use polarization vision for target detection and the broader importance of second-order motion detection for animal behavior

The influence of dietary fatty acid and fasting on the hepatic lipid metabolism of barramundi (Lates calcarifer)

For many fish species, dietary fish oil (FO) has been substituted with other oils such as poultry oil (PO) without affecting growth performance. However, in barramundi, the mechanisms by which fatty acid metabolism is regulated are poorly understood, and the effects of FO substitution are unknown. This study defined changes in the expression of genes controlling the metabolism of fatty acids in barramundi over a 24-h time period after a single meal. From one to 12h after a single feeding event, the expression of fatty acid synthesis genes in the liver was upregulated, while genes involved in the β-oxidation showed minimal alteration. However, the expression of β-oxidation genes was significantly correlated with the expression of genes regulating fatty acid synthesis. In a second experiment, the changes in liver fatty acid composition and gene expression were defined after FO was substituted with PO. Liver fatty acid profile reflected the diet composition, with some subtle exceptions supporting the enrichment of certain long-chain polyunsaturated fatty acids in the liver. The fish from all experimental groups preferentially retained more docosahexaenoic acid than eicosapentaenoic acid in the liver, suggesting a bioconversion of this fatty acid to intermediate fatty acids. Replacement of FO with PO significantly regulated genes controlling both fatty acid synthesis and catabolism pathways, potentially related to a higher percentage of monounsaturated fatty acids, in the livers of fish fed these diets. The results demonstrated that diet composition significantly altered the lipid metabolism in barramundi and that there was a balance between direct dietary effects and endogenous synthetic capacity

Rapid effects of essential fatty acid deficiency on growth and development parameters and transcription of key fatty acid metabolism genes in juvenile barramundi (Lates calcarifer)

Barramundi (Lates calcarifer), a catadromous teleost of significant and growing commercial importance, are reported to have limited fatty acid bioconversion capability and therefore require preformed long-chain PUFA (LC-PUFA) as dietary essential fatty acid (EFA). In this study, the response of juvenile barramundi (47·0 g/fish initial weight) fed isolipidic and isoenergetic diets with 8·2 % added oil was tested. The experimental test diets were either devoid of fish oil (FO), and thus with no n-3 LC-PUFA (FO FREE diet), or with a low inclusion of FO (FO LOW diet). These were compared against a control diet containing only FO (FO CTRL diet) as the added lipid source, over an 8-week period. Interim samples and measurements were taken fortnightly during the trial in order to define the aetiology of the onset and progression of EFA deficiency. After 2 weeks, the fish fed the FO FREE and FO LOW diets had significantly lower live-weights, and after 8 weeks significant differences were detected for all performance parameters. The fish fed the FO FREE diet also had a significantly higher incidence of external abnormalities. The transcription of several genes involved in fatty acid metabolism was affected after 2 weeks of feeding, showing a rapid nutritional regulation. This experiment documents the aetiology of the onset and the progression of EFA deficiency in juvenile barramundi and demonstrates that such deficiencies can be detected within 2 weeks in juvenile fish

Modelling the removal of an earth bund to maximise seawater ingress into a coastal wetland

Weed infestation is a critical management issue for maintaining the natural values of coastal wetlands across the world. Widespread use of herbicides to control weeds has resulted in environmental issues in the past and has led to the search for more natural control methods such as using saline water. This study investigates management options to restore the natural flow regimes between freshwater wetlands and seawater by removing a bund which was built to grow ponded pasture. The study was carried out in the Mungalla wetland in Queensland, which is an important Nywaigi aboriginal community asset for recreation, cultural and economic activities. The study used modelling and monitoring methods to (a) assess how effective the earth bund was in excluding seawater and (b) the extent to which seawater could enter the wetland without the bund. Eleven scenarios were investigated to estimate seawater ingress under different tide, onshore wind, low atmospheric pressure and sea level rise (SLR) conditions. Results show that removal of the bund reinstated periodic tidal ingress into the wetland. Seawater intrusion was also shown to increase when there were onshore winds and/or low atmospheric pressure associated with cyclones. The greatest impact was under future SLR, where large increases in the inundation frequency and extent are likely to cause a shift in the wetland vegetation towards native salt tolerant species. Findings of this study are useful for examining the potential impact of various management interventions that are being considered for wetland system repair. For example, the removal or height adjustment of tidal barriers, dredging of silted streams, removal of weeds from choked streams and reintroduction of tidal flows to control weed infestation, improve water quality and restore natural values to the wetlands