BIOBREED – a new project on marker assisted population breeding in wheat with resistance to common bunt

The paper describes the BIOBREED project

Association Mapping for Common Bunt Resistance in Wheat

Common bunt, caused by Tilletia caries and T. foetida, is a fungal disease of wheat world wide. Infection, occurring via seed borne teliospores, is generally controlled by the application of seed treatments prior to sowing. Farming systems like organic agriculture with a very limited range of organic seed treatments available rely heavily on common bunt resistance genes within wheat. In the framework of the BIOBREED project an association study in winter wheat was conducted, aiming at the identification of genetic loci linked to resistance towards common bunt in wheat. 152 European wheat cultivars were phenotyped for their resistance reaction for the two consecutive years 2011/12 at Agrologica research station at Mariager. Infection was scored as percent infected ears. The scorings were log-transformed to fit a disease scoring scale ranging from 1 to 9. The association analysis was performed for each year separately as well as for the mean scoring of the two years. The wheat cultivars were genotyped with DArT markers, yielding 1832 polymorphic loci. The association analysis was conducted using the computer program Genstat, with the ASReml module. Minimun allele frequency for the association analysis was set to 0.07. 13 out of the total of1832 marker in our study were linked to common bunt resistance in wheat (-log10(P) >3). These marker are located on 8 out of the 21 wheat chromosomes. Comparisons of these findings with other published results are difficult since only very little is known about the chromosomal location of common bunt resistance genes/QTL in wheat. Chromosome 2B was previously reported to carry gene(s) for common bunt resistance. Findings of our analysis are in accordance with this: 4 of the linked marker resided on this chromosome. Further, another two linked marker were found on chromosome 2D, another chromosome previously reported to carry common bunt resistance genes. Our study shows the possibilities of finding makers linked to common bunt resistance in wheat, and of using these markers for marker assisted selection of wheat cultivars tailored for the needs of organic agriculture

Common bunt resistant wheat composite cross populations

Utilising diverse populations instead of single line varieties is expected to lead to a number of advantages in cereal production. These include reduced epidemics of plant diseases, improved weed competition and better exploitation of soil nutrients, resulting in improved yield stability. However, a number of challenges must be met before diverse wheat populations can be introduced into commercial wheat production: one of these is the development of breeding technologies based on mass selection which enable breeders and farmers to improve specific traits in populations and maintain diversity at the same time. BIOBREED is a project started in Denmark in 2011 to meet these challenges for wheat population breeding. The project is focusing on the development of tools and methods for mass selection of traits relevant for organic and low input production, where it is expected that the highest benefits of utilizing diverse populations can be achieved. BIOBREED focuses on three main aspects of wheat population breeding for organic and low input production systems: i) common bunt (caused by Tilletia caries) resistance, ii) selection for improved protein content and iii) the influence on population diversity of different selection pathways. Selection for common bunt resistance in wheat composite cross populations 33 crosses were made between 23 common bunt resistant winter wheat varieties in order to generate two populations. Progeny of all crosses was bulked in the F 3 to constitute the first population Pop.No.Sel. Prior to the creation of the second population Pop.Sel, the F 3 of the parental crosses was sown as head-rows with common bunt infection. Only lines that showed resistance to common bunt were used to create Pop.Sel. in generation F 4 . Afterwards the two populations were grown with and without inoculation with common bunt in order to i) select for bunt resistance and ii) to be able to compare the effect on diversity of this selection step. Preliminary results show a higher level of common bunt resistance in Pop.Sel in the first year. Single seed sorting for protein content Prior to sowing the F 5 seed of the population Pop.Sel, the seed were sorted individually for protein content using a BoMill IQ Grain Quality Sorter 1002S. The fraction of seeds containing the 10% highest and another fraction containing the 10% lowest protein content were selected. The four populations, Pop.No.Sel, Pop.Sel, and Pop.Sel.high. Protein and Pop.Sel.low.Protein and the parental lines were sown in a randomized complete block yield trial at two locations in Denmark in order to assess their yield and quality parameters such as protein content and baking quality of the parents and there derived populations. Results are expected in the summer 2013. Diversity of wheat composite cross populations. The practical question of “how much diversity is needed in populations?” has not been answered yet. BIOBREED will aim to to quantify the levels of diversity in wheat composite cross populations after the different selection steps i) cultivation with and without common bunt inoculum, and ii) sorting for single protein content. In a fist attempt SSR markers will be used to describe the influence these different selection pathways will have on the population diversity. 90 SSR markers—about two markers per chromosome arm—will be used to describe the initial genetic diversity of the 23 parental lines. F 6 seed of the different populations will be analysed with the same markers and population diversity after different selection pathways will be quantified

Sexual harassment and eating disorders in female elite athletes - A controlled study

The aims were to examine the percentage of female elite athletes and controls reporting sexual harassment and abuse (SHAB), and whether a higher percentage of female athletes with eating disorders (ED) had experienced SHAB. A questionnaire was administered to the total population of female elite athletes (n=660) and controls (n=780) aged 15-39 years. SHAB were measured through 11 questions, ranging from light to severe SHAB. In addition, questions about dietary-, menstrual- and training history and the Eating Disorder Inventory were included. The response rate was 88% for athletes and 71% for controls. Athletes (n=121) and controls (n=81) classified as “at risk” for ED and non-ED controls participated in a clinical interview. A higher percentage of controls, compared with athletes reported experiences of SHAB in general (59% vs. 51%, p<0.001). A lower percentage of athletes had experienced SHAB in sports than outside sport (28% vs.39%, p<0.001). A higher percentage of ED athletes than non-ED athletes had experienced SHAB (66% vs.48%) (p<0.01), both inside sport and outside sport. In spite of the fact that a higher percentage of controls compared with athletes had experienced SHAB, it is necessary to formulate clear guidelines, set up educational workshops and implement intervention programs for both ED and SHAB in sport

A 6 year study of mammographic compression force : practitioner variability within and between screening sites

Background The application of compression force in mammography is more heavily influenced by the practitioner rather than the client. This can affect client experience, radiation dose and image quality. This research investigates practitioner compression force variation over a 6 year screening cycle in three different screening units. Methods: Recorded data included: practitioner code, applied compression force(N), breast thickness(mm), BI-RADS® density category. Exclusion criteria included: previous breast surgery, previous/ongoing assessment, breast implants. 975 clients (2925) client visits, 11,700 mammogram images) met inclusion criteria across three sites. Data analysis assessed practitioner variation of compression force and breast thickness. Results: Practitioners across three breast screening sites behave differently in the application of compression force. Two of the three sites demonstrate variability within themselves, though they demonstrated no significant difference in mean, first and third quartile compression force and breast thickness values CC(p&gt;0.5), MLO(p&gt;0.1) between themselves. However, the third site (where mandate dictates a minimum compression force is applied) greater consistency was demonstrated; a significant difference in mean, first and third quartile compression force and breast thickness values(p&lt;0.001) was demonstrated between this site and the other two sites. Conclusion: Stabilisation of variations in compression force may have a positive impact on image quality, radiation dose reduction, re-attendance levels and potentially cancer detection. The large variation in compression forces could negatively impact on client experience between the units and within a unit. Further research is required to establish best practice guidelines for compression force within mammography. Keywords: Compression force, Breast compression, Compression variabilit

Self-reported versus diagnosed stress fractures in Norwegian female elite athletes

The aim of this study was to determine the prevalence of selfreported versus diagnosed stress fractures in female elite athletes and non-athletic controls. A random sample of Norwegian elite athletes from the national teams, aged 13-39 years (n = 186) and a random sample of non-athletic controls (n = 145) in the same age group participated in the study. The athletes represented a junior- or senior team, or a recruiting squad for one of these teams, in one of 46 different sports/events. A higher percentage of athletes self-reported stress fractures (14.0%) compared to those diagnosed with stress fractures (8.1%) (p < 0.001). Six controls self-reported stress fractures, but none of them were diagnosed with stress fractures. These results indicate that selfreporting of stress fractures has low validity. This finding has important implications for further research on stress fractures in athletes

Impact of menstrual function on hormonal response to repeated bouts of intense exercise

Background: Strenous exercise stimulates the hypothalamic-pituitary (HP) axis in order to ensure homeostasis and promote anabolism. Furthermore, exercise stimulates a transient increase in the neurotrophin brain-derived neurotrophic factor (BDNF) suggested to mediate the anxiolytic effects of exercise. Athletes with secondary functional hypothalamic amenorrhea (FHA) have been reported to have lower BDNF, and a blunted HP axis response to exercise as athletes with overtraining syndrome. Aim: The aim of the study was to investigate the hormonal and BDNF responses to a two-bout maximal exercise protocol with four hours of recovery in between in FHA and eumenorrheic (EUM) athletes. Methods: Eumenorrheic (n = 16) and FHA (n = 14) endurance athletes were recruited from national teams and competitive clubs. Protocols included gynecological examination; body composition (DXA); 7-day assessment of energy availability; blood sampling pre and post the two exercises tests. Results: There were no differences between groups in hormonal responses to the first exercise bout. After the second exercise bout IGFBP-3 increased more in FHA compared with EUM athletes (2.1 ± 0.5 vs. 0.6 ± 0.6 μg/L, p = 0.048). There were non-significant trends toward higher increase in IGF-1 (39.3 ± 4.3 vs. 28.0 ± 4.6 μg/L, p = 0.074), BDNF (96.5 ± 22.9 vs. 34.4 ± 23.5 μg/L, p = 0.058), GH to cortisol ratio (0.329 ± 0.010 vs. 0.058 ± 0.010, p = 0.082), and decrease in IGF-1 to IGFBP-3 ratio (−2.04 ± 1.2 vs. 0.92 ± 1.22, p = 0.081) in athletes with FHA compared with EUM athletes. Furthermore, there was a non-significant trend toward a higher increase in prolactin to cortisol ratio in EUM athletes compared with athletes with FHA (0.60 ± 0.15 vs. 0.23 ± 0.15, p = 0.071). No differences in the hormonal or BDNF responses between the two exercise bouts as a result of menstrual function were found. Conclusion: No major differences in the hormonal or BDNF responses between the two exercise bouts as a result of menstrual function could be detected

Association Mapping for Common Bunt Resistance in Wheat Landraces and Cultivars

Common bunt is a seed borne disease of wheat whose importance is likely to increase due to the growing organic seed market, which, in addition to seed phytosanitary measures, relies on genetic resistances towards the disease. Genome wide association studies in wheat have been proven to be a useful tool in the detection of genetic polymorphisms underlying phenotypic trait variation in wheat. Here 248 wheat landraces and cultivars representing 130 years of breeding history were screened for two years in the field for their resistance reactions towards common bunt. The majority of lines exhibited high levels of susceptibility towards common bunt, while 25 accessions had less than 10% infection. Using Diversity Array Technology (DArT) markers for genotyping and correcting for population stratification by using a compressed mixed linear model, we identified two significant marker trait associations (MTA) for common bunt resistance, designated QCbt.cph-2B and QCbt.cph-7A, located on wheat chromosomes 2B and 7A, respectively. This shows that genome wide association studies (GWAS) are applicable in the search for genetic polymorphisms for resistance towards less studied plant diseases such as common bunt in the context of an under representation of resistant lines

Association mapping for common bunt resistance in wheat

Common bunt is a seed borne disease of wheat whose importance is anticipated to increase with a growing organic seed market which, in addition to seed phytosanitary measures, relies on genetic resistances towards common bunt. Genome wide association studies have been proven a useful tool in the detection of genetic polymorphisms underlying phenotypic trait variation in wheat. We screened 248 wheat accessions for two years for their resistance reactions towards common bunt. The majority of lines exhibited high levels of susceptibility towards common bunt, but 25 accessions had less than 10 % infection. Using Diversity Array Technology (DArT) markers for genotyping and correcting for population stratification by using a compressed mixed linear model, we identified two significant marker trait associations for common bunt resistance, designated Q Cbt-cph-2 B and Q Cbt-cph-7 A, located on wheat chromosomes 2 B and 7 A, respectively. We show that genome wide association studies are applicable in the search for genetic polymorphisms for resistance towards rare plant diseases in the context of an under-representation of resistant lines