The Monumental UNESCO Site of Panamá Viejo: Investigation of the Masonry Mortars

The presented study illustrates the characterisation of several artificial materials (bedding, joint mortars, and plasters) belonging to the masonries of the UNESCO site of Panamá Viejo, located in Panama City (Panama). This monumental site represents the first Spanish settlement on the Pacific Coast, founded 500 years ago, in 1519. Through mineralogical and petrographic analyses of the collected samples, as stereomicroscope and polarized light microscopy (PLM) observations of bulk and thin sections, respectively, environmental scanning electron microscopy and micro-chemical investigations (ESEM-EDX) and X-Ray Powder diffraction (XRPD) analysis, it was possible to identify the composition of the materials utilized for the production of mortars and plasters, in addition to the determination of their state of conservation. Therefore, this work represents a substantial step for the preservation of the Panamá Viejo site, in order to support the selection of the most suitable restoration products, such as consolidants, protectives, etc., but also for choosing the most compatible materials for possible replacements/integrations in the masonries

Optimization of pixel size and propagation distance in X-ray phase-contrast virtual histology

X-ray phase-contrast coupled to high-spatial resolution imaging systems provides a high sensitivity for distinguishing soft tissue structures in small samples, thus being suited for X-ray virtual histology. Propagation-based phase-contrast tomography can deliver a considerable gain in signal-to-noise ratio (SNR) at small pixel sizes when it is combined to a suitable phase retrieval filter. We optimized acquisition parameters, namely the propagation distance and the pixel size, with the aim of providing adequate spatial resolution and sensitivity for virtual histology of breast surgery specimens, scanned with a phase-contrast microtomography (mu CT) system employing a commercial sCMOS detector at the SYRMEP beamline of the Italian synchrotron facility Elettra (Trieste, Italy). A pathological breast tissue sample was embedded in paraffin and imaged using a polychromatic synchrotron beam at an average energy of 24 keV. The high numerical optical aperture of the imaging system enabled to adjust the pixel size to 1, 2.5 and 4 mu m. The scans were acquired at five sample-to-detector distances: 4.5, 150, 250, 500 and 1000 mm. SNR was measured in an homogeneous region portion of the mu CT image for each combination of pixel size and propagation distance. Experimental results were compared to a theoretical model taking into account the actual point spread function of the employed imaging system. The measured gain of SNR associated with the application of the phase-retrieval matched the predictions for large Fresnel numbers (N-F > 2). For each pixel size, an optimal range of propagation distances was found. Optimal mu CT reconstructions were then compared with their respective histopatological images, showing an excellent visibility of relevant structures. The optimization performed in this study will allow to select the most appropriate geometrical configurations for future acquisitions of virtual histology images of different specimens via phase-contrast microtomography

The current role of touch imprint cytology in sentinel lymph node intra-operatory examination

N/

Predictors of Hepatocellular Carcinoma Early Recurrence in Patients Treated with Surgical Resection or Ablation Treatment: A Single-Center Experience

Introduction: Hepatocellular carcinoma (HCC) is the sixth most diagnosed malignancy and the fourth leading cause of cancer-related death worldwide, with poor overall survival despite available curative treatments. One of the most crucial factors influencing survival in HCC is recurrence. The current study aims to determine factors associated with early recurrence of HCC in patients with BCLC Stage 0 or Stage A treated with surgical resection or local ablation. Materials and Methods: We retrospectively enrolled 58 consecutive patients diagnosed with HCC within BCLC Stage 0 or Stage A and treated either by surgical resection or local ablation with maximum nodule diameter 20 mm (HR 4.5, 95% C.I. 3.9–5.1), platelet count 2 (HR 2.7, 95% C.I. 2.2–3.3). Discussion and Conclusions: Our results are in line with the current literature. Male gender and tumor nodule dimension are the main risk factors associated with early HCC recurrence. Platelet count and other combined scores can be used as predictive tools for early HCC recurrence, although more studies are needed to define cut-offs

On the reproducibility and repeatability of laser absorption spectroscopy measurements for δ2H and δ18O isotopic analysis

The aim of this study was to analyse the reproducibility of off-axis integrated cavity output spectroscopy (OA-ICOS)-derived δ2H and δ18O measurements on a set of 35 water samples by comparing the performance of four laser spectroscopes with the performance of a conventional mass spectrometer under typical laboratory conditions. All samples were analysed using three different schemes of standard/sample combinations and related data processing to assess the improvement of results compared with mass spectrometry. The repeatability of the four OA-ICOS instruments was further investigated by multiple analyses of a sample subset to evaluate the stability of δ2H and δ18O measurements. Results demonstrated an overall agreement between OA-ICOS-based and mass spectrometry-based measurements for the entire dataset. However, a certain degree of variability existed in precision and accuracy between the four instruments. There was no evident bias or systematic deviations from the mass spectrometer values, but random errors, which were apparently not related to external factors, significantly affected the final results. Our investigation revealed that analytical precision ranged ±from ±0.56‰ to ±1.80‰ for δ2H and from ±0.10‰ to ±0.27‰ for δ18O measurements, with a marked variability among the four instruments. The overall capability of laser instruments to reproduce stable results with repeated measurements of the same sample was acceptable, and there were general differences within the range of the analytical precision for each spectroscope. Hence, averaging the measurements of three identical samples led to a higher degree of accuracy and eliminated the potential for random deviations

DRAFT 03

DRAFT 03, a magazine published about work and thoughts of students and staff of Interiors

TGS1 mediates 2,2,7-trimethyl guanosine capping of the human telomerase RNA to direct telomerase dependent telomere maintenance

Pathways that direct the selection of the telomerase-dependent or recombination-based, alternative lengthening of telomere (ALT) maintenance pathway in cancer cells are poorly understood. Using human lung cancer cells and tumor organoids we show that formation of the 2,2,7-trimethylguanosine (TMG) cap structure at the human telomerase RNA 5′ end by the Trimethylguanosine Synthase 1 (TGS1) is central for recruiting telomerase to telomeres and engaging Cajal bodies in telomere maintenance. TGS1 depletion or inhibition by the natural nucleoside sinefungin impairs telomerase recruitment to telomeres leading to Exonuclease 1 mediated generation of telomere 3′ end protrusions that engage in RAD51-dependent, homology directed recombination and the activation of key features of the ALT pathway. This indicates a critical role for 2,2,7-TMG capping of the RNA component of human telomerase (hTR) in enforcing telomerase-dependent telomere maintenance to restrict the formation of telomeric substrates conductive to ALT. Our work introduces a targetable pathway of telomere maintenance that holds relevance for telomere-related diseases such as cancer and aging

Immune-related pan-cancer gene expression signatures of patient survival revealed by NanoString-based analyses

The immune system plays a central role in the onset and progression of cancer. A better understanding of transcriptional changes in immune cell-related genes associated with cancer progression, and their significance in disease prognosis, is therefore needed. NanoString-based targeted gene expression profiling has advantages for deployment in a clinical setting over RNA-seq technologies. We analysed NanoString PanCancer Immune Profiling panel gene expression data encompassing 770 genes, and overall survival data, from multiple previous studies covering 10 different cancer types, including solid and blood malignancies, across 515 patients. This analysis revealed an immune gene signature comprising 39 genes that were upregulated in those patients with shorter overall survival; of these 39 genes, three (MAGEC2, SSX1 and ULBP2) were common to both solid and blood malignancies. Most of the genes identified have previously been reported as relevant in one or more cancer types. Using Cibersort, we investigated immune cell levels within individual cancer types and across groups of cancers, as well as in shorter and longer overall survival groups. Patients with shorter survival had a higher proportion of M2 macrophages and γδ T cells. Patients with longer overall survival had a higher proportion of CD8+ T cells, CD4+ T memory cells, NK cells and, unexpectedly, T regulatory cells. Using a transcriptomics platform with certain advantages for deployment in a clinical setting, our multi-cancer meta-analysis of immune gene expression and overall survival data has identified a specific transcriptional profile associated with poor overall survival