Molecular Communication for Coordinated Seed and Fruit Development: What Can We Learn from Auxin and Sugars?

Seed development in flowering plants is a critical part of plant life for successful reproduction. The formation of viable seeds requires the synchronous growth and development of the fruit and the three seed structures: the embryo, the endosperm, the seed coat. Molecular communication between these tissues is crucial to coordinate these developmental processes. The phytohormone auxin is a significant player in embryo, seed and fruit development. Its regulated local biosynthesis and its cell-to-cell transport capacity make of auxin the perfect candidate as a signaling molecule to coordinate the growth and development of the embryo, endosperm, seed and fruit. Moreover, newly formed seeds need nutrients and form new carbon sink, generating high sugar flow from vegetative tissues to the seeds. This review will discuss how auxin and sugars may be considered as signaling molecules to coordinate seed and fruit development

Transcriptional control of Arabidopsis seed development

Seed development is a complex process that proceeds through sequences of events regulated by the interplay of various genes, prominent among them being the transcription factors (TFs). The members of WOX, HD-ZIP III, ARF, and CUC families have a preferential role in embryonic patterning. While WOX TFs are required for initiating body axis, HD-ZIP III TFs and CUCs establish bilateral symmetry and SAM. And ARF5 performs a major role during embryonic root, ground tissue, and vasculature development. TFs such as LEC1, ABI3, FUS3, and LEC2 (LAFL) are considered the master regulators of seed maturation. Furthermore, several new TFs involved in seed storage reserves and dormancy have been identified in the last few years. Their association with those master regulators has been established in the model plant Arabidopsis. Also, using chromatin immunoprecipitation (ChIP) assay coupled with transcriptomics, genome-wide target genes of these master regulators have recently been proposed. Many seed-specific genes, including those encoding oleosins and albumins, have appeared as the direct target of LAFL. Also, several other TFs act downstream of LAFL TFs and perform their function during maturation. In this review, the function of different TFs in different phases of early embryogenesis and maturation is discussed in detail, including information about their genetic and molecular interactors and target genes. Such knowledge can further be leveraged to understand and manipulate the regulatory mechanisms involved in seed development. In addition, the genomics approaches and their utilization to identify TFs aiming to study embryo development are discussed.Seed development is a complex process that proceeds through sequences of events regulated by the interplay of various genes, prominent among them being the transcription factors (TFs). The members of WOX, HD-ZIP III, ARF, and CUC families have a preferential role in embryonic patterning. While WOX TFs are required for initiating body axis, HD-ZIP III TFs and CUCs establish bilateral symmetry and SAM. And ARF5 performs a major role during embryonic root, ground tissue, and vasculature development. TFs such as LEC1, ABI3, FUS3, and LEC2 (LAFL) are considered the master regulators of seed maturation. Furthermore, several new TFs involved in seed storage reserves and dormancy have been identified in the last few years. Their association with those master regulators has been established in the model plant Arabidopsis. Also, using chromatin immunoprecipitation (ChIP) assay coupled with transcriptomics, genome-wide target genes of these master regulators have recently been proposed. Many seed-specific genes, including those encoding oleosins and albumins, have appeared as the direct target of LAFL. Also, several other TFs act downstream of LAFL TFs and perform their function during maturation. In this review, the function of different TFs in different phases of early embryogenesis and maturation is discussed in detail, including information about their genetic and molecular interactors and target genes. Such knowledge can further be leveraged to understand and manipulate the regulatory mechanisms involved in seed development. In addition, the genomics approaches and their utilization to identify TFs aiming to study embryo development are discussed

Calcium- and BTB domain protein-modulated PINOID protein kinase directs polar auxin transport

Plant architecture is determined by tightly regulated developmental processes that largely depend on the action of the plant hormone auxin. A major determinant in auxin action, besides its signaling pathway, is its polar cell-to-cell transport (PAT) throughout the plant. The direction on this transport depends on the localization of the auxin efflux carriers, the PIN proteins. The PINOID (PID) serine/threonine protein kinase is a key regulator of the subcellular localization of the PINs, which are direct phosphorylation targets of the kinase. This thesis describes the functional analysis of three direct interacting partners of PID, two calcium-binding proteins, TOUCH3 (TCH3) and PID BINDING PROTEIN1 (PBP1), and a BTB and TAZ domain (BT) protein. Several studies have already indicated that calcium signaling is induced by auxin application and is necessary for auxin transport. With the isolation of the two calcium-binding proteins TCH3 and PBP1 as interactors of PID, a molecular link between auxin transport and calcium signaling was identified. In this thesis, we show that calcium is involved in the regulation of both the kinase activity and the subcellular localization of PID. In complement to calcium, BTB scaffold proteins are part of the PID protein complex. A detailed analysis of BT protein family in Arabidopsis indicate a functional redundancy among the five members of this family and their requirement for the female gametophyte development. Moreover the BT proteins are required scaffold components in the PID signaling pathway. The functional analyses of the PBPs described in this thesis uncover a new mechanism of protein kinase activity regulation via calcium signaling, and present novel roles for the BT proteins, not only in PID signaling, but also more in general in plant development.LEI Universiteit LeidenPlant science

Generation of Variants in Listeria monocytogenes Continuous-Flow Biofilms Is Dependent on Radical-Induced DNA Damage and RecA-Mediated Repair

The food-borne pathogen Listeria monocytogenes is a Gram-positive microaerophilic facultative anaerobic rod and the causative agent of the devastating disease listeriosis. L. monocytogenes is able to form biofilms in the food processing environment. Since biofilms are generally hard to eradicate, they can function as a source for food contamination. In several occasions biofilms have been identified as a source for genetic variability, which potentially can result in adaptation of strains to food processing or clinical conditions. However, nothing is known about mutagenesis in L. monocytogenes biofilms and the possible mechanisms involved. In this study, we showed that the generation of genetic variants was specifically induced in continuous-flow biofilms of L. monocytogenes, but not in static biofilms. Using specific dyes and radical inhibitors, we showed that the formation of superoxide and hydroxyl radicals was induced in continuous-flow biofilms, which was accompanied with in an increase in DNA damage. Promoter reporter studies showed that recA, which is an important component in DNA repair and the activator of the SOS response, is activated in continuous-flow biofilms and that activation was dependent on radical-induced DNA damage. Furthermore, continuous-flow biofilm experiments using an in-frame recA deletion mutant verified that RecA is required for induced generation of genetic variants. Therefore, we can conclude that generation of genetic variants in L. monocytogenes continuous-flow biofilms results from radical-induced DNA damage and RecA-mediated mutagenic repair of the damaged DNA

Les Français et l’entreprise : Qu'en pensent-ils ? Qu'en savent-ils ?

Frenchmen and the Firm : What Do They Think of It ? What Do They Know of It ? Opinion polls state that Frenchmen mistrust firms and think that their employees’ interests come at the end of their goals. A new inquiry sponsored by the Fnege (Fédération nationale pour l’enseignement de la gestion) has studied the actual knowledge of French people regarding the wayLes enquêtes d’opinion font état d’un divorce entre les Français et les entreprises, ces dernières étant soupçonnées de faire passer les intérêts de leurs salariés au dernier rang de leurs préoccupations et objectifs. Une enquête récente de la Fnege s’est intéressée à la connaissance réelle qu’ont les Français du fonctionnement des entreprises et de leur utilité sociale. Les résultats mettent en évidence les lacunes importantes de nos concitoyens sur le sujet. De plus, les médias et le système éducatif ne contribuent pas à corriger cette vision. Classification JEL : A11, A21, M5.Boisivon Jean-Pierre. Les Français et l’entreprise : Qu'en pensent-ils ? Qu'en savent-ils ?. In: Revue d'économie financière, n°98-99, 2010. Information et formation économiques et financières. pp. 233-239