Correcting the influence of an asymmetric line spread function in 2-degree Field spectrograph data

We investigate the role of asymmetries in the line spread function of the 2-degree field spectrograph and the variations in these asymmetries with the CCD, the plate, the time of observation and the fibre. A data-reduction pipeline is developed that takes these deformations into account for the calibration and cross-correlation of the spectra. We show that, using the emission lines of calibration lamp observations, we can fit the line spread function with the sum of two Gaussian functions representing the theoretical signal and a perturbation of the system. This model is then used to calibrate the spectra and generate templates by downgrading high resolution spectra. Thus, we can cross-correlate the observed spectra with templates degraded in the same way. Our reduction pipeline is tested on real observations and provides a significant improvement in the accuracy of the radial velocities obtained. In particular, the systematic errors that were as high as ~20 km/s when applying the AAO reduction package 2dfDR are now reduced to ~5 km/s. Even though the 2-degree Field spectrograph is to be decommissioned at the end of 2005, the analysis of archival data and previous studies could be improved by the reduction procedure we propose here.Comment: 9 pages, 9 figures, accepted to PASA, minor change

Centrifuge facility conceptual system study. Volume 2: Facility systems and study summary

The Centrifuge Facility is a major element of the biological research facility for the implementation of NASA's Life Science Research Program on Space Station Freedom using nonhuman species (small primates, rodents, plants, insects, cell tissues, etc.). The Centrifuge Facility consists of a variable gravity Centrifuge to provide artificial gravity up to 2 earth G's' a Holding System to maintain specimens at microgravity levels, a Glovebox, and a Service Unit for servicing specimen chambers. The following subject areas are covered: (1) Holding System; (2) Centrifuge System; (3) Glovebox System; (4) Service System; and (5) system study summary

Safety and biodistribution of sulfated archaeal glycolipid archaeosomes as vaccine adjuvants

Archaeosomes are liposomes comprised of ether lipids derived from various archaea which, as adjuvants, can induce robust, long-lasting humoral and cell-mediated immune responses to entrapped antigens. Traditional total polar lipid (TPL) archaeosome formulations are relatively complex and semi-synthetic archaeosomes involve many synthetic steps to arrive at the final desired glycolipid composition. We have developed a novel archaeosome formulation comprising a sulfated saccharide group covalently linked to the free sn-1 hydroxyl backbone of an archaeal core lipid (sulfated S-lactosylarchaeol, SLA) mixed with uncharged glycolipid (lactosylarchaeol, LA). This new class of adjuvants can be easily synthesized and retains strong immunostimulatory activity for induction of cell-mediated immunity following systemic immunization. Herein, we demonstrate the safety of SLA/LA archaeosomes following intramuscular injection to mice and evaluate the immunogenicity, in vivo distribution and cellular uptake of antigen (ovalbumin) encapsulated into SLA/LA archaeosomes. Overall, we have found that semi-synthetic sulfated glycolipid archaeosomes are a safe and effective novel class of adjuvants capable of inducing strong antigen-specific immune responses in mice and protection against subsequent B16 melanoma tumor challenge. A key step in their mechanism of action appears to be the recruitment of immune cells to the injection site and the subsequent trafficking of antigen to local draining lymph nodes. A better understanding of the safety and mechanism of action of novel adjuvants such as archaeosomes is a key step in their advancement into clinical use

The Diesel Exhaust in Miners Study: V. Evaluation of the Exposure Assessment Methods

Exposure to respirable elemental carbon (REC), a component of diesel exhaust (DE), was assessed for an epidemiologic study investigating the association between DE and mortality, particularly from lung cancer, among miners at eight mining facilities from the date of dieselization (1947–1967) through 1997. To provide insight into the quality of the estimates for use in the epidemiologic analyses, several approaches were taken to evaluate the exposure assessment process and the quality of the estimates. An analysis of variance was conducted to evaluate the variability of 1998–2001 REC measurements within and between exposure groups of underground jobs. Estimates for the surface exposure groups were evaluated to determine if the arithmetic means (AMs) of the REC measurements increased with increased proximity to, or use of, diesel-powered equipment, which was the basis on which the surface groups were formed. Estimates of carbon monoxide (CO) (another component of DE) air concentrations in 1976–1977, derived from models developed to predict estimated historical exposures, were compared to 1976–1977 CO measurement data that had not been used in the model development. Alternative sets of estimates were developed to investigate the robustness of various model assumptions. These estimates were based on prediction models using: (i) REC medians rather AMs, (ii) a different CO:REC proportionality than a 1:1 relation, and (iii) 5-year averages of historical CO measurements rather than modeled historical CO measurements and DE-related determinants. The analysis of variance found that in three of the facilities, most of the between-group variability in the underground measurements was explained by the use of job titles. There was relatively little between-group variability in the other facilities. The estimated REC AMs for the surface exposure groups rose overall from 1 to 5 μg m−3 as proximity to, and use of, diesel equipment increased. The alternative estimates overall were highly correlated (∼0.9) with the primary set of estimates. The median of the relative differences between the 1976–1977 CO measurement means and the 1976–1977 estimates for six facilities was 29%. Comparison of estimated CO air concentrations from the facility-specific prediction models with historical CO measurement data found an overall agreement similar to that observed in other epidemiologic studies. Other evaluations of components of the exposure assessment process found moderate to excellent agreement. Thus, the overall evidence suggests that the estimates were likely accurate representations of historical personal exposure levels to DE and are useful for epidemiologic analyses

Fatty Acid Metabolism on Pasture- and Feedlot-Finished Cattle

Feeding high-grain diets to finishing beef cattle results in high proportions of saturated fatty acids (SFA) in the beef, which is considered to confer negative impacts on human health. In contrast, pasture-finished cattle produce lower proportion of SFA, greater n-3 and less n-6 polyunsaturated fatty acids (PUFA), and higher conjugated linoleic acids (CLA) compared to high grain-finished beef (Noviandi et al. 2012). Increased n-3 PUFA, especially C18:3 n-3, can reduce the risk of heart disease, hypertension, inflammation, and mammary cancer, and lower cholesterol concentration in blood (De Deckere et al. 1998; Tapiero et al. 2002). Nitrogen fertilisation can increase biomass production and nitrogen (N) concentration of tall fescue (TF; Festuca arundinacea) (Berg and Sims 2000; Teuton et al. 2007), which positively affected beef cattle performance (Berg and Sims 1995). However, the metabolism of fatty acids (FA) in pasture-finished beef steers due to N fertilization on TF has not yet been studied. Therefore, the current study was performed to test a hypothesis that due to its potential impacts on nutrient and energy utilization, N fertilization would affect FA compositions in ruminal fluid, blood serum, and adipose tissue of pasture-finished beef steers. In addition, we were interested in beneficial effects of grazing steers by comparing the FA profiles between pasture- and feedlot-finished beef steers