38 research outputs found

    Identification of genetic variants influencing the human plasma proteome

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    Proteomic

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    A new method, based on shotgun spectral matching of peptide tandem mass spectra, was successfully applied to the identification of different food species. The method was demonstrated to work on raw as well as processed samples from 16 mammalian and 10 bird species by counting spectral matches to spectral libraries in a reference database with one spectral library per species. A phylogenetic tree could also be constructed directly from the spectra. Nearly all samples could be correctly identified at the species level, and 100% at the genus level. The method does not use any genomic information and unlike targeted methods, no prior knowledge of genetic variation within a genus or species is necessary. (c) 2016 Elsevier Ltd. All rights reserved.Proteomic

    Description of Caldicellulosiruptor saccharolyticus gen. nov., sp. nov: An obligately anaerobic, extremely thermophilic, cellulolytic bacterium

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    A new obligately anaerobic, extremely thermophilic, cellulolytic bacterium is described. The strain designated Tp8T 6331 is differentiated from thermophilic cellulolytic clostridia on the basis of physiological characteristics and phylogenetic position within the Bacillus/Clostridium subphylum of the Gram-positive bacteria. Strain Tp8T 6331 is assigned to a new genus Caldicellulosiruptor, as Caldicellulosiruptor saccharolyticus gen., nov., sp. nov

    Shallow-water Aplysina Nardo (Aplysinidae, Verongida, Demospongiae) from the São Sebastião Channel and its environs (Tropical southwestern Atlantic), with the description of a new species and a literature review of other brazilian records of the genus

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    Two species of Aplysina Nardo, 1834 are described in this article, Aplysina caissara sp. n. and A. fulva (Pallas, 1766). Additionally, a possible third species was identified as A. aff. cauliformis. Collections were done in the São Sebastião Channel area as an ongoing effort to assess the poriferan biodiversity of the northern sector of the São Paulo State coastline. Specimens were collected by scuba diving, and descriptions of external morphology are based on the observation of populations alive, and on extensive underwater photography. A literature review of other brazilian records of Aplysina was undertaken, and an ammended species list is offered
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