Four new species of Epacanthion Wieser, 1953 (Nematoda: Thoracostomopsidae) in intertidal sediments of the Nanji Islands from the East China Sea

Shi, Benze, Xu, Kuidong (2016): Four new species of Epacanthion Wieser, 1953 (Nematoda: Thoracostomopsidae) in intertidal sediments of the Nanji Islands from the East China Sea. Zootaxa 4085 (4): 557-574, DOI: http://doi.org/10.11646/zootaxa.4085.4.

Paroctonchus nanjiensis gen. nov., sp. nov. (Nematoda, Enoplida, Oncholaimidae) from intertidal sediments in the East China Sea

Shi, Benze, Xu, Kuidong (2016): Paroctonchus nanjiensis gen. nov., sp. nov. (Nematoda, Enoplida, Oncholaimidae) from intertidal sediments in the East China Sea. Zootaxa 4126 (1): 97-106, DOI: http://doi.org/10.11646/zootaxa.4126.1.

Two new rapacious nematodes from intertidal sediments, Gammanema magnum sp. nov. and Synonchium caudatubatum sp. nov. (Nematoda, Selachinematidae)

Two new species of the family Selachinematidae Cobb, 1915 from an intertidal sandy flat in the East China Sea are described. Both species are distinct rapacious nematodes, preying on other nematodes. Gammanema magnum sp. nov. is characterized by its leaf-like labial setae, large loop-shaped amphideal fovea in the male and small spiral ones in the female, an anterior buccal cavity reinforced by 12 rhabdia, each rhabdion with about six denticles, and two unequally long spicules. Gammanema magnum sp. nov. is a striking species, exhibiting extreme sexual dimorphism in the amphideal fovea, but lacking a gubernaculum or precloacal supplements, all features by which it can be differentiated from congeneric species. Synonchium caudatubatum sp. nov. is characterized by a posterior buccal cavity, with three mandibles each with a large tooth flanked by three smaller teeth on both sides, a transverse oval-shaped multispiral amphideal fovea, and a bluntly rounded tail with a protuberant caudal duct. Synonchium caudatubatum sp. nov. is unique in the genus in having a protuberant caudal duct in the tail end. Furthermore, it differs from its congeners by its mandibles, which have seven teeth each. Synonchium caudatubatum sp. nov. lacks a gubernaculum and a precloacal supplement, both features present in congeners except S. depressum Gerlach, 1954

Microbe-driven elemental cycling enables microbial adaptation to deep-sea ferromanganese nodule sediment fields

Abstract Background Ferromanganese nodule-bearing deep-sea sediments cover vast areas of the ocean floor, representing a distinctive habitat in the abyss. These sediments harbor unique conditions characterized by high iron concentration and low degradable nutrient levels, which pose challenges to the survival and growth of most microorganisms. While the microbial diversity in ferromanganese nodule-associated sediments has been surveyed several times, little is known about the functional capacities of the communities adapted to these unique habitats. Results Seven sediment samples collected adjacent to ferromanganese nodules from the Clarion–Clipperton Fracture Zone (CCFZ) in the eastern Pacific Ocean were subjected to metagenomic analysis. As a result, 179 high-quality metagenome-assembled genomes (MAGs) were reconstructed and assigned to 21 bacterial phyla and 1 archaeal phylum, with 88.8% of the MAGs remaining unclassified at the species level. The main mechanisms of resistance to heavy metals for microorganisms in sediments included oxidation (Mn), reduction (Cr and Hg), efflux (Pb), synergy of reduction and efflux (As), and synergy of oxidation and efflux (Cu). Iron, which had the highest content among all metallic elements, may occur mainly as Fe(III) that potentially functioned as an electron acceptor. We found that microorganisms with a diverse array of CAZymes did not exhibit higher community abundance. Instead, microorganisms mainly obtained energy from oxidation of metal (e.g., Mn(II)) and sulfur compounds using oxygen or nitrate as an electron acceptor. Chemolithoautotrophic organisms (Thaumarchaeota and Nitrospirota phyla) were found to be potential manganese oxidizers. The functional profile analysis of the dominant microorganisms further indicated that utilization of inorganic nutrients by redox reactions (rather than organic nutrient metabolism) is a major adaptive strategy used by microorganisms to support their survival in the ferromanganese nodule sediments. Conclusions This study provides a comprehensive metagenomic analysis of microbes inhabiting metal-rich ferromanganese nodule sediments. Our results reveal extensive redundancy across taxa for pathways of metal resistance and transformation, the highly diverse mechanisms used by microbes to obtain nutrition, and their participation in various element cycles in these unique environments. Video Abstrac