Mutations in Lettuce Improvement

Lettuce is a major vegetable in western countries. Mutations generated genetic variations and played an important role in the domestication of the crop. Many traits derived from natural and induced mutations, such as dwarfing, early flowering, male sterility, and chlorophyll deficiency, are useful in physiological and genetic studies. Mutants were also used to develop new lettuce products including miniature and herbicide-tolerant cultivars. Mutant analysis was critical in lettuce genomic studies including identification and cloning of disease-resistance genes. Mutagenesis combined with genomic technology may provide powerful tools for the discovery of novel gene alleles. In addition to radiation and chemical mutagens, unconventional approaches such as tissue or protoplast culture, transposable elements, and space flights have been utilized to generate mutants in lettuce. Since mutation breeding is considered nontransgenic, it is more acceptable to consumers and will be explored more in the future for lettuce improvement

Investigation on Various Aboveground Traits to Identify Drought Tolerance in Cowpea Seedlings

Impacts of drought stress on crop production can significantly impair farmer’s revenue, hence adversely impacting the gross national product growth. For cowpea [Vigna unguiculata (L.) Walp.], which is a legume of economic importance, effects of drought at early vegetative growth could lead to substantial yield losses. However, little has been done with respect to breeding for cowpea cultivars withstanding drought at early vegetative growth. In addition, previous investigations have focused on how plantmorphology and root architecture can confer drought tolerance in cowpea, which is not sufficient in efforts to unravel unknown drought tolerance–related genetic mechanisms, potentially of great importance in breeding, and not pertaining to either plantmorphology or root architecture. Therefore, the objective of this study was to evaluate aboveground drought-related traits of cowpea genotypes at seedling stage. A total of 30 cowpea genotypes were greenhouse grown within boxes and the experimental design was completely randomized with three replicates. Drought stress was imposed for 28 days. Data on a total of 17 aboveground-related traits were collected. Results showed the following: 1) a large variation in these traits was found among the genotypes; 2) more trifoliate wilt/chlorosis tolerance but more unifoliate wilt/chlorosis susceptible were observed; 3) delayed senescence was related to the ability of maintaining a balanced chlorophyll content in both unifoliate and trifoliate leaves; and 4) the genotypes PI293469, PI349674, and PI293568 were found to be slow wilting and drought tolerant. These results could contribute to advancing breeding programs for drought tolerance in cowpea

Investigation on Various Aboveground Traits to Identify Drought Tolerance in Cowpea Seedlings

Impacts of drought stress on crop production can significantly impair farmer’s revenue, hence adversely impacting the gross national product growth. For cowpea [Vigna unguiculata (L.) Walp.], which is a legume of economic importance, effects of drought at early vegetative growth could lead to substantial yield losses. However, little has been done with respect to breeding for cowpea cultivars withstanding drought at early vegetative growth. In addition, previous investigations have focused on how plantmorphology and root architecture can confer drought tolerance in cowpea, which is not sufficient in efforts to unravel unknown drought tolerance–related genetic mechanisms, potentially of great importance in breeding, and not pertaining to either plantmorphology or root architecture. Therefore, the objective of this study was to evaluate aboveground drought-related traits of cowpea genotypes at seedling stage. A total of 30 cowpea genotypes were greenhouse grown within boxes and the experimental design was completely randomized with three replicates. Drought stress was imposed for 28 days. Data on a total of 17 aboveground-related traits were collected. Results showed the following: 1) a large variation in these traits was found among the genotypes; 2) more trifoliate wilt/chlorosis tolerance but more unifoliate wilt/chlorosis susceptible were observed; 3) delayed senescence was related to the ability of maintaining a balanced chlorophyll content in both unifoliate and trifoliate leaves; and 4) the genotypes PI293469, PI349674, and PI293568 were found to be slow wilting and drought tolerant. These results could contribute to advancing breeding programs for drought tolerance in cowpea

Genetic diversity and association analysis of leafminer (Liriomyza langei) resistance in spinach (Spinacia oleracea)

Leafminer (Liriomyza langei) is a major insect pest of many important agricultural crops, including spinach (Spinacia oleracea). Use of genetic resistance is an efficient, economic and environment-friendly method to control this pest. The objective of this research was to conduct association analysis and identify single nucleotide polymorphism (SNP) markers associated with leafminer resistance in spinach germplasm. A total of 300 USDA spinach germplasm accessions were used for the association analysis of leafminer resistance. Genotyping by sequencing (GBS) was used for genotyping and 783 SNPs from GBS were used for association analysis. The distribution of leafminer resistance showed a near normal distribution with a wide range from 1.1 to 11.7 stings per square centimeter leaf area, suggesting that the leafminer resistance in spinach is a complex trait controlled by multiple genes with minor effect in this spinach panel. Association analysis indicated that five SNP markers, AYZV02040968_7171, AYZV02076752_412, AYZV02098618_4615, AYZV02147304_383, and AYZV02271373_398 were associated with the leafminer resistance with a LOD 2.5 or higher. The SNP markers may be useful for breeders to select plants and lines for leafminer resistance in spinach breeding programs through marker-assisted selection.The accepted manuscript in pdf format is listed with the files at the bottom of this page. The presentation of the authors' names and (or) special characters in the title of the manuscript may differ slightly between what is listed on this page and what is listed in the pdf file of the accepted manuscript; that in the pdf file of the accepted manuscript is what was submitted by the author

Phenomic and Physiological Analysis of Salinity Effects on Lettuce

Salinity is a rising concern in many lettuce-growing regions. Lettuce (Lactuca sativa L.) is sensitive to salinity, which reduces plant biomass, and causes leaf burn and early senescence. We sought to identify physiological traits important in salt tolerance that allows lettuce adaptation to high salinity while maintaining its productivity. Based on previous salinity tolerance studies, one sensitive and one tolerant genotype each was selected from crisphead, butterhead, and romaine, as well as leaf types of cultivated lettuce and its wild relative, L. serriola L. Physiological parameters were measured four weeks after transplanting two-day old seedlings into 350 mL volume pots filled with sand, hydrated with Hoagland nutrient solution and grown in a growth chamber. Salinity treatment consisted of gradually increasing concentrations of NaCl and CaCl2 from 0 mM/0 mM at the time of transplanting, to 30 mM/15 mM at the beginning of week three, and maintaining it until harvest. Across the 10 genotypes, leaf area and fresh weight decreased 0–64% and 16–67%, respectively, under salinity compared to the control. Salinity stress increased the chlorophyll index by 4–26% in the cultivated genotypes, while decreasing it by 5–14% in the two wild accessions. Tolerant lines less affected by elevated salinity were characterized by high values of the chlorophyll fluorescence parameters Fv/Fm and instantaneous photosystem II quantum yield (QY), and lower leaf transpiration

Crustacean Meal Elicits Expression of Growth and Defense-Related Genes in Roots of Lettuce and Tomato

Powdered crab and lobster shells (crustacean meal) obtained from fisheries are used as soil amendments to promote plant health and defense. In this study, a commercial crustacean meal amendment used to promote the health of lettuce, tomato, and other crop plants was applied to roots of lettuce and tomato seedlings. Gene expression profiling of the treated roots was assessed by RNA sequencing (RNA-seq) at 24 h after application relative to a 0 h time point. The RNA-seq analyses revealed upregulation of different types of genes in both tomato and lettuce roots at 24 h. Gene ontology analyses revealed increased expression of genes associated with oxidoreductases/metal ion binding in tomato roots at 24 h, while there was predominantly increased expression of genes associated with cell wall organization, lyases, and hydrolases in lettuce roots at 24 h. The types of defense-related genes expressed were also markedly different. In tomato roots, the most highly induced gene (log2 fold change 13.84, P ≤ 0.001) encoded a defense-associated miraculin-like protein, but transcripts of a similar gene were not induced in lettuce roots. Interestingly, phenylpropanoid pathway genes relating to cell wall biogenesis and lignification were significantly upregulated in both lettuce and tomato roots, suggesting that strengthening of plant cell walls is a common response to crustacean meal application. This research provides insight into gene expression patterns in the roots of lettuce and tomato in response to crustacean meal, improving our understanding of how this amendment could aid in plant health. [Graphic: see text] The author(s) have dedicated the work to the public domain under the Creative Commons CC0 “No Rights Reserved” license by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law, 2022

SNP association analysis of resistance to Verticillium wilt (Verticillium dahliae Kleb.) in spinach

Abstract Verticillium wilt, caused by Verticillium dahliae Kleb., is an important disease of spinach (Spinacia oleracea L.) and use of genetic resistance is the most economical method of controlling this disease. The objective of this research was to conduct molecular association analysis for Verticillium wilt resistance in spinach. A total of 95 USDA spinach accessions were evaluated for resistance to Verticillium wilt in this study. Phenotyping was conducted using a 0-4 scale of disease severity scores of Verticillium wilt and genotyping was performed using 2,878 SNPs which were postulated from genotyping by sequencing (GBS). STRUCTURE 2.3.4 and MEGA 6 were used for population structure and genetic diversity analysis. The single marker regression (SMR) from QGene, general linear mode (GLM) and mixed linear mode (MLM) from TEASSEL, and compressed mixed linear model (cMLM) and enriched compressed mixed linear model (EcMLM) from GAPIT were used for association analysis of Verticillium wilt resistance. Significant genetic variation of Verticillium wilt disease resistance was observed among the 95 spinach accessions with a wide range from 0.3 to 3.0 on a 0-4 scale. Two well-differentiated genetic populations and admixtures were postulated in the spinach panel. Five SNP markers, AYZV02052595_108, AYZV02112284_14543, AYZV02123399_146, AYZV02164612_331, and AYZV02170942_274 were identified to be associated with Verticillium wilt resistance with R-squared values from 9.3 to 18.2%. These markers may provide a tool utilized in molecular spinach breeding to select Verticillium wilt resistance through markerassisted selection