The great tit HapMap project: A continental‐scale analysis of genomic variation in a songbird

This is the final version. Available on open access from Wiley via the DOI in this recordData availability statement: The code to reproduce the results is available on Github: https://github.com/lgs85/SpurginBosse_Hapmap. The data, including the Plink-formatted genotype files from all populations, and the downstream outputs are on Dryad: https://doi.org/10.5061/dryad.w3r2280z5.A major aim of evolutionary biology is to understand why patterns of genomic diversity vary within taxa and space. Large-scale genomic studies of widespread species are useful for studying how environment and demography shape patterns of genomic divergence. Here, we describe one of the most geographically comprehensive surveys of genomic variation in a wild vertebrate to date; the great tit (Parus major) HapMap project. We screened ca 500,000 SNP markers across 647 individuals from 29 populations, spanning ~30 degrees of latitude and 40 degrees of longitude – almost the entire geographical range of the European subspecies. Genome-wide variation was consistent with a recent colonisation across Europe from a South-East European refugium, with bottlenecks and reduced genetic diversity in island populations. Differentiation across the genome was highly heterogeneous, with clear ‘islands of differentiation’, even among populations with very low levels of genome-wide differentiation. Low local recombination rates were a strong predictor of high local genomic differentiation (FST), especially in island and peripheral mainland populations, suggesting that the interplay between genetic drift and recombination causes highly heterogeneous differentiation landscapes. We also detected genomic outlier regions that were confined to one or more peripheral great tit populations, probably as a result of recent directional selection at the species' range edges. Haplotype-based measures of selection were related to recombination rate, albeit less strongly, and highlighted population-specific sweeps that likely resulted from positive selection. Our study highlights how comprehensive screens of genomic variation in wild organisms can provide unique insights into spatio-temporal evolutionary dynamics.Natural Environment Research Council (NERC)European Research Council (ERC)Biotechnology and Biological Sciences Research Council (BBSRC

The great tit HapMap project: a continental‐scale analysis of genomic variation in a songbird

A major aim of evolutionary biology is to understand why patterns of genomic diversity vary within taxa and space. Large-scale genomic studies of widespread species are useful for studying how environment and demography shape patterns of genomic divergence. Here, we describe one of the most geographically comprehensive surveys of genomic variation in a wild vertebrate to date; the great tit (Parus major) HapMap project. We screened ca 500,000 SNP markers across 647 individuals from 29 populations, spanning ~30 degrees of latitude and 40 degrees of longitude – almost the entire geographical range of the European subspecies. Genome-wide variation was consistent with a recent colonisation across Europe from a South-East European refugium, with bottlenecks and reduced genetic diversity in island populations. Differentiation across the genome was highly heterogeneous, with clear ‘islands of differentiation’, even among populations with very low levels of genome-wide differentiation. Low local recombination rates were a strong predictor of high local genomic differentiation (FST), especially in island and peripheral mainland populations, suggesting that the interplay between genetic drift and recombination causes highly heterogeneous differentiation landscapes. We also detected genomic outlier regions that were confined to one or more peripheral great tit populations, probably as a result of recent directional selection at the species' range edges. Haplotype-based measures of selection were related to recombination rate, albeit less strongly, and highlighted population-specific sweeps that likely resulted from positive selection. Our study highlights how comprehensive screens of genomic variation in wild organisms can provide unique insights into spatio-temporal evolutionary dynamics

Design and Testing of Low Cost Chair with Round Mortise and Tenon Joints

The present paper focuses on construction of school seats for developing countries from locally available resources using the local industry and low-end technology. Aim of the work is experimental assessment of mechanical properties of joints flexion in angular plane. Furthermore work considers assessment of joint firmness and comparison between various joint types. Paper encloses the review of various joint manufacturing designs (tenon and mortise), which were proposed for its suitable mechanical properties and simplicity of manufacturing. Designated joint type is easiest form of joint construction and technologically feasible for chair manufacturing. The joints were constructed from fir wood. Further the work introduces design of simple seat construction made from massive wood material manufactured by low-end technology with regards to achieving the due specifications. The task of this work is to design the viable manufacturing process of seats and chairs from raw wood and scrap material. Essential part of work is also manufacturing of seat prototype and simplified model of proposed mortise and tenon drill

Propyl gallate-induced platelet aggregation in patients with end-stage renal disease: The influence of the haemodialysis procedure

Background: Platelet dysfunction is a well-established disturbance in haemodialysis (HD) patients. Propyl gallate is a synthetic platelet activator with the property to stimulate platelet aggregation. The aim of the present study was to evaluate the influence of a single haemodialysis session on propyl gallate-induced platelet aggregation. Methods: Thirty-nine HD patients were enrolled in the study and 20 healthy volunteers were studied as controls. Cellulose diacetate (CD) dialysers were used in 20 patients and polysulphone dialysers in 19. HD was performed via an A-V fistula in 27 patients and via an i.v. catheter in 12. Erythropoietin was administered in 37 patients (epoietin-alpha in 24 and darbepoietin in 13). Thirty-four were receiving the low-molecular-weight heparin tinzaparin. Propyl gallate slide aggregometry was used for evaluating platelet aggregation. Results: In HD patients, platelet aggregation was impaired before as well as after the HD session. No effect of the HD procedure, type of vascular access, adequacy of HD or type of erythropoietin on the propyl gallate-induced platelet aggregation was detected. Platelet aggregation was higher when CD dialyser was used. A negative correlation between the time needed for platelet aggregation to occur and tinzaparin dose was found. Conclusion: Propyl gallate-induced platelet aggregation in HD patients is impaired. Platelet aggregation was higher in patients dialysed with CD membrane than in those dialysed with polysulphone membrane. The higher the dose of tinzaparin, the higher the platelet aggregation. The clinical significance of the above results needs further evaluation

The diet of the Eleonora's falcon (Falco eleonorae) in the Aegean archipelago (Greece)

Xirouchakis, S. M., Alivizatos, H., Georgopoulou, E., Dimalexis, A., Latsoudis, P., Portolou, D., Karris, G., Georgiakakis, P., Fric, J., Saravia, V., Barboutis, C., Bourdakis, S., Kakalis, E., Kominos, T., Simaiakis, S. (2019): The diet of the Eleonora's falcon (Falco eleonorae) in the Aegean archipelago (Greece). Journal of Natural History 53 (29): 1767-1785, DOI: 10.1080/00222933.2019.166897