An Analysis of the Parasites of a Mid-winter Population of the Snowshoe Hare, Lepus americanus, on Insular Newfoundland During a Cyclical Peak

A mid-winter sample of 78 Snowshoe Hares (Lepus americanus) was collected during their cyclical peak in population from three eco-regions (Western Newfoundland, North Shore and Avalon Forest) on insular Newfoundland and was examined for the presence of enteric parasites. The length of the hares was significantly shorter in the Avalon Forest Region (n = 27) than those of the Western Newfoundland Region (n = 25) and North Shore Region (n = 26) samples (P ≤ 0.001 and P ≤ 0.003 respectively); however, no significant differences occurred for other morphological measurements. Four species of parasites, two cestodes (Mosgovoyia pectinata and Taenia pisiformis) and two nematodes (Obeliscoides cuniculi and Rauschia triangularis), were recovered. Taenia pisiformis was recovered from the North Shore eco-region only. No other significant differences with respect to their prevalence, intensity, mean intensity, relative density and dispersion between eco-regions were found. Within eco-regions, only R. triangularis showed a significantly higher value (P ≤ 0.027) for males and the prevalence of this species was lower than that previously reported. The occurrence of O. cuniculi was significantly different between the higher weight classes of hares and the prevalence of this species was higher than that previously reported. No trends for multiple infections were noted. The expansion of a new animal species, the Coyote, Canis latrans, to Newfoundland appeared to have had no effect on the diversity of parasites found in the hare

Plant exudates improve the mechanical conditions for root penetration through compacted soils

ACKNOWLEDGEMENTS Funding for this project was provided by Tertiary Education Trust Funds (TETFund) and Ambrose Alli University. We wish to thank Annette Raffan for technical support. M. Naveed is funded by the Biotechnology and Biological Sciences Research Council (BBSRC) project ‘Rhizosphere by Design’ (BB/L026058/1). Open access via Springer Compact AgreementPeer reviewedPublisher PD

Interactive effects of low molecular weight carbon compounds on N2O emissions

Low molecular weight carbon (C) compounds in hotspots such as the rhizosphere can greatly affect nitrate reduction processes. Towards a better prediction of N2O emission from denitrification, we are still lacking understanding of responses to the supply of complex C compound mixtures such as rhizodeposits versus the often examined response to individually amended C compounds. In a laboratory study, we applied three C compounds, glucose, citric acid and glutamic acid, individually or as a three-compound mixture to 14NH415NO3 amended soil at 80% water-filled pore space. For the individual C compound treatments, the substrateswere enriched in 13C-C. The mixture was enriched in 13C-C either in all constituent compounds or in one of the compounds only, resulting in four different treatments. This set-up enabled quantification of the utilization of each compound for heterotrophic respiration when applied individually and in combination, and for this to be related to the dynamics of 15N-NO3- reduction to 15N-N2O. The total 15N-N2O emission from the compound mixture over 10 days was similar to the total emission predicted from the average of the individual compound treatments This could suggest potential predictability of denitrification responses to complex mixtures of C based on knowledge of its constituents. However, immediate and simultaneous peaks of 15N-N2O and 13C-CO2 fluxes from the compound mixture contrasted with observed delays in 15N-N2O and 13C-CO2 fluxes when the compounds had been applied individually. Moreover, relative contributions of the C compounds to 13C-CO2 respiration from the compound mixture were different from the predicted contributions based on their individual application. While contributions of glutamic acid-C and citric acid-C to respiration in mixture during peak 15N-N2O emission were increased, glucose utilization in the mixture treatment was significantly lower. These findings give a glimpse of the challenges we are facing when trying to predict nitrate reduction occurring in the rhizosphere where interactions between C compounds and the soil matrix, as well as within the wider heterotrophic community, determine process rates. Given that most of our understanding of the role of C in regulating nitrate reduction, is informed from single compound studies, we require more evidence on the effects and innate interactions of compound mixtures to be able to predict responses to C sources

Closing maize yield gaps in sub-Saharan Africa will boost soil N2_{2}O emissions

In sub-Saharan Africa (SSA), the most important staple crop is maize; the production of which is dominated by smallholder farming systems using low external inputs (<10 kg N ha$^{−1}$) resulting in low crop yields and large yield gaps (difference between actual and potential yields). To assess increases in soil N$_{2}$O emissions when closing maize yield gaps by increased fertilizer use, we reviewed the literature, developed a relationship between yield gaps and soil N$_{2}$O emissions, and used it to scale across SSA. According to our analysis, N$_{2}$O emissions from maize production will increase from currently 255 to 1755 ± 226 Gg N$_{2}$O-N year$^{−1}$ (+589%) if existing maize yield gaps are closed by 75%, increasing total anthropogenic N$_{2}$O emissions for SSA by c. 50%

Methane and nitrous oxide fluxes across an elevation gradient in the tropical Peruvian Andes

Peer reviewedPublisher PD

Instruments to assess the perception of physicians in the decision-making process of specific clinical encounters: a systematic review

<p>Abstract</p> <p>Background</p> <p>The measurement of processes and outcomes that reflect the complexity of the decision-making process within specific clinical encounters is an important area of research to pursue. A systematic review was conducted to identify instruments that assess the perception physicians have of the decision-making process within specific clinical encounters.</p> <p>Methods</p> <p>For every year available up until April 2007, PubMed, PsycINFO, Current Contents, Dissertation Abstracts and Sociological Abstracts were searched for original studies in English or French. Reference lists from retrieved studies were also consulted. Studies were included if they reported a self-administered instrument evaluating physicians' perceptions of the decision-making process within specific clinical encounters, contained sufficient description to permit critical appraisal and presented quantitative results based on administering the instrument. Two individuals independently assessed the eligibility of the instruments and abstracted information on their conceptual underpinnings, main evaluation domain, development, format, reliability, validity and responsiveness. They also assessed the quality of the studies that reported on the development of the instruments with a modified version of STARD.</p> <p>Results</p> <p>Out of 3431 records identified and screened for evaluation, 26 potentially relevant instruments were assessed; 11 met the inclusion criteria. Five instruments were published before 1995. Among those published after 1995, five offered a corresponding patient version. Overall, the main evaluation domains were: satisfaction with the clinical encounter (n = 2), mutual understanding between health professional and patient (n = 2), mental workload (n = 1), frustration with the clinical encounter (n = 1), nurse-physician collaboration (n = 1), perceptions of communication competence (n = 2), degree of comfort with a decision (n = 1) and information on medication (n = 1). For most instruments (n = 10), some reliability and validity criteria were reported in French or English. Overall, the mean number of items on the modified version of STARD was 12.4 (range: 2 to 18).</p> <p>Conclusion</p> <p>This systematic review provides a critical appraisal and repository of instruments that assess the perception physicians have of the decision-making process within specific clinical encounters. More research is needed to pursue the validation of the existing instruments and the development of patient versions. This will help researchers capture the complexity of the decision-making process within specific clinical encounters.</p

Introduction of HIV-2 and multiple HIV-1 subtypes to Lebanon.

HIV genetic variability, phylogenetic relationships, and transmission dynamics were analyzed in 26 HIV-infected patients from Lebanon. Twenty-five specimens were identified as HIV-1 and one as HIV-2 subtype B. The 25 strains were classified into six env-C2-V3 HIV-1 subtypes: B (n = 10), A (n = 11), C (n = 1), D (n = 1), G (n = 1), and unclassifiable. Potential recombinants combining parts of viral regions from different subtypes Aenv/Dpol/Agag, Genv/Apol, and the unclassifiable-subtype(env)/unclassifiable-subtype(pol)/Agag were found in three patients. Epidemiologic analysis of travel histories and behavioral risks indicated that HIV-1 and HIV-2 subtypes reflected HIV strains prevalent in countries visited by patients or their sex partners. Spread of complex HIV-subtype distribution patterns to regions where HIV is not endemic may be more common than previously thought. Blood screening for both HIV-1 and HIV-2 in Lebanon is recommended to protect the blood supply. HIV subtype data provide information for vaccine development

Search for Millicharged Particles at SLAC

Particles with electric charge q < 10^(-3)e and masses in the range 1--100 MeV/c^2 are not excluded by present experiments. An experiment uniquely suited to the production and detection of such "millicharged" particles has been carried out at SLAC. This experiment is sensitive to the infrequent excitation and ionization of matter expected from the passage of such a particle. Analysis of the data rules out a region of mass and charge, establishing, for example, a 95%-confidence upper limit on electric charge of 4.1X10^(-5)e for millicharged particles of mass 1 MeV/c^2 and 5.8X10^(-4)e for mass 100 MeV/c^2.Comment: 4 pages, REVTeX, multicol, 3 figures. Minor typo corrected. Submitted to Physical Review Letter

Defining composition and function of the rhizosphere microbiota of barley genotypes exposed to growth-limiting nitrogen supplies

The microbiota populating the rhizosphere, the interface between roots and soil, can modulate plant growth, development, and health. These microbial communities are not stochastically assembled from the surrounding soil, but their composition and putative function are controlled, at least partially, by the host plant. Here, we use the staple cereal barley as a model to gain novel insights into the impact of differential applications of nitrogen, a rate-limiting step for global crop production, on the host genetic control of the rhizosphere microbiota. Using a high-throughput amplicon sequencing survey, we determined that nitrogen availability for plant uptake is a factor promoting the selective enrichment of individual taxa in the rhizosphere of wild and domesticated barley genotypes. Shotgun sequencing and metagenome-assembled genomes revealed that this taxonomic diversification is mirrored by a functional specialization, manifested by the differential enrichment of multiple Gene Ontology terms, of the microbiota of plants exposed to nitrogen conditions limiting barley growth. Finally, a plant soil feedback experiment revealed that host control of the barley microbiota underpins the assembly of a phylogenetically diverse group of bacteria putatively required to sustain plant performance under nitrogen-limiting supplies. Taken together, our observations indicate that under nitrogen conditions limiting plant growth, host-microbe and microbe-microbe interactions fine-tune the host genetic selection of the barley microbiota at both taxonomic and functional levels. The disruption of these recruitment cues negatively impacts plant growth