Clustering with shallow trees

We propose a new method for hierarchical clustering based on the optimisation of a cost function over trees of limited depth, and we derive a message--passing method that allows to solve it efficiently. The method and algorithm can be interpreted as a natural interpolation between two well-known approaches, namely single linkage and the recently presented Affinity Propagation. We analyze with this general scheme three biological/medical structured datasets (human population based on genetic information, proteins based on sequences and verbal autopsies) and show that the interpolation technique provides new insight.Comment: 11 pages, 7 figure

Cosmological evolution of scalar fields and gravitino dark matter in gauge mediation at low reheating temperatures

We consider the dynamics of the supersymmetry-breaking scalar field and the production of dark matter gravitinos via its decay in a gauge-mediated supersymmetry breaking model with metastable vacuum. We find that the scalar field amplitude and gravitino density are extremely sensitive to the parameters of the hidden sector. For the case of an O'Raifeartaigh sector, we show that the observed dark matter density can be explained by gravitinos even for low reheating temperatures T_{R} < 10 GeV. Such low reheating temperatures may be implied by detection of the NLSP at the LHC if its thermal freeze-out density is in conflict with BBN.Comment: 11 pages RevTex. Extended discussion and minor corrections, conclusions unaltered. Version to be published in JCA

An Ilomastat-CD Eye Drop Formulation to Treat Ocular Scarring

PURPOSE: The purpose of this study was to develop a topical matrix metalloproteinase inhibitor preparation for antiscarring therapy. METHODS: The broad spectrum matrix metalloproteinase inhibitor ilomastat was formulated using 2-hydroxypropyl-β-cyclodextrin in aqueous solution. In vitro activity of ilomastat-cyclodextrin (ilomastat-CD) was examined using fibroblasts seeded in collagen. Permeation of ilomastat-CD eye drop through pig eye conjunctiva was confirmed using Franz diffusion cells. Ilomastat-CD eye drop was applied to rabbit eyes in vivo, and the distribution of ilomastat in ocular tissues and fluids was determined by liquid chromatography-mass spectroscopy. RESULTS: The aqueous solubility of ilomastat-CD was ∼1000 μg/mL in water and 1400 μg/mL in PBS (pH 7.4), which is greater than ilomastat alone (140 and 160 μg/mL in water and PBS, respectively). The in vitro activity of ilomastat-CD to inhibit collagen contraction in the presence of human Tenon fibroblast cells was unchanged compared to uncomplexed ilomastat. Topically administered ilomastat-CD in vivo to rabbit eyes resulted in a therapeutic concentration of ilomastat being present in the sclera and conjunctiva and within the aqueous humor. CONCLUSIONS: Ilomastat-CD has the potential to be formulated as an eye drop for use as an antifibrotic, which may have implications for the prevention of scarring in many settings, for example glaucoma filtration surgery

Étude exploratoire des caractéristiques professionnelles d&#039;un échantillon de suicidants hospitalisés

Cette étude a pour objectif de décrire les caractéristiques professionnelles d’un échantillon de suicidants. Un enquêteur a interrogé les suicidants âgés de 18 à 65 ans, hospitalisés consécutivement dans une unité spécialisée du CHU d’Angers sur une durée de 6 mois et demi. Au total, 87 suicidants actifs avec un emploi ont été interrogés. Ils ont souvent été confrontés à des contraintes organisationnelles décrites dans la littérature comme responsables de souffrance mentale liée au travail. Cela concerne globalement autant les hommes que les femmes. En comparaison aux enquêtes de santé au travail (Sumer, Samotrace…), les suicidants sont plus nombreux à ressentir entre autres un stress intense au travail, une conscience professionnelle heurtée et à être en situation tendue selon le modèle de Karasek. Cela pourrait être en faveur d’un lien entre les tentatives de suicide et certains facteurs de pénibilité mentale au travail. Les résultats de cette étude sont à interpréter avec prudence du fait des phénomènes de circularité des données et de la faiblesse de l’échantillon

New determinations of gamma-ray line intensities of the Ep = 550 keV and Ep = 1747 keV resonances of the 13-C(p,gamma)14-N reaction

Gamma-ray angular distributions for the resonances at Ep = 550 keV and 1747 keV of the radiative capture reaction 13-C(p,g)14-N have been measured, using intense proton beams on isotopically pure 13-C targets. Relative intensities for the strongest transitions were extracted with an accuracy of typically five per cent, making these resonances new useful gamma-ray standards for efficiency calibration in the energy range Egamma = 1.6 to 9 MeV.Comment: 17 pages, 6 figures, Nuclear Instruments and Methods, Sec. A, accepte

Randomness Increases Order in Biological Evolution

n this text, we revisit part of the analysis of anti-entropy in Bailly and Longo (2009} and develop further theoretical reflections. In particular, we analyze how randomness, an essential component of biological variability, is associated to the growth of biological organization, both in ontogenesis and in evolution. This approach, in particular, focuses on the role of global entropy production and provides a tool for a mathematical understanding of some fundamental observations by Gould on the increasing phenotypic complexity along evolution. Lastly, we analyze the situation in terms of theoretical symmetries, in order to further specify the biological meaning of anti-entropy as well as its strong link with randomness