Effects of Preference for Attachment to Low-degree Nodes on the Degree Distributions of a Growing Directed Network and a Simple Food-Web Model

We study the growth of a directed network, in which the growth is constrained by the cost of adding links to the existing nodes. We propose a new preferential-attachment scheme, in which a new node attaches to an existing node i with probability proportional to 1/k_i, where k_i is the number of outgoing links at i. We calculate the degree distribution for the outgoing links in the asymptotic regime (t->infinity), both analytically and by Monte Carlo simulations. The distribution decays like k c^k/Gamma(k) for large k, where c is a constant. We investigate the effect of this preferential-attachment scheme, by comparing the results to an equivalent growth model with a degree-independent probability of attachment, which gives an exponential outdegree distribution. Also, we relate this mechanism to simple food-web models by implementing it in the cascade model. We show that the low-degree preferential-attachment mechanism breaks the symmetry between in- and outdegree distributions in the cascade model. It also causes a faster decay in the tails of the outdegree distributions for both our network growth model and the cascade model.Comment: 10 pages, 7 figures. A new figure added. Minor modifications made in the tex

The "zeroth law" of turbulence: Isotropic turbulence simulations revisited

The dimensionless kinetic energy dissipation rate C_epsilon is estimated from numerical simulations of statistically stationary isotropic box turbulence that is slightly compressible. The Taylor microscale Reynolds number Re_lambda range is 20 < Re_lambda < 220 and the statistical stationarity is achieved with a random phase forcing method. The strong Re_lambda dependence of C_epsilon abates when Re_lambda approx. 100 after which C_epsilon slowly approaches approx 0.5 a value slightly different to previously reported simulations but in good agreement with experimental results. If C_epsilon is estimated at a specific time step from the time series of the quantities involved it is necessary to account for the time lag between energy injection and energy dissipation. Also, the resulting value can differ from the ensemble averaged value by up to +-30%. This may explain the spread in results from previously published estimates of C_epsilon.Comment: 7 pages, 7 figures. Submitted to Phys. Rev.

van der Waals density functionals built upon the electron-gas tradition: Facing the challenge of competing interactions

The theoretical description of sparse matter attracts much interest, in particular for those ground-state properties that can be described by density functional theory (DFT). One proposed approach, the van der Waals density functional (vdW-DF) method, rests on strong physical foundations and offers simple yet accurate and robust functionals. A very recent functional within this method called vdW-DF-cx [K. Berland and P. Hyldgaard, Phys. Rev. B 89, 035412] stands out in its attempt to use an exchange energy derived from the same plasmon-based theory from which the nonlocal correlation energy was derived. Encouraged by its good performance for solids, layered materials, and aromatic molecules, we apply it to several systems that are characterized by competing interactions. These include the ferroelectric response in PbTiO$_3$, the adsorption of small molecules within metal-organic frameworks (MOFs), the graphite/diamond phase transition, and the adsorption of an aromatic-molecule on the Ag(111) surface. Our results indicate that vdW-DF-cx is overall well suited to tackle these challenging systems. In addition to being a competitive density functional for sparse matter, the vdW-DF-cx construction presents a more robust general purpose functional that could be applied to a range of materials problems with a variety of competing interactions

Weak Gravitational Lensing by a Sample of X-Ray Luminous Clusters of Galaxies -- II. Comparison with Virial Masses

Dynamic velocity dispersion and mass estimates are given for a sample of five X-ray luminous rich clusters of galaxies at intermediate redshifts (z~0.3) drawn from a sample of 39 clusters for which we have obtained gravitational lens mass estimates. The velocity dispersions are determined from between 9 and 20 redshifts measured with the LDSS spectrograph of the William Herschel Telescope, and virial radii are determined from imaging using the UH8K mosaic CCD camera on the University of Hawaii 2.24m telescope. Including clusters with velocity dispersions taken from the literature, we have velocity dispersion estimates for 12 clusters in our gravitational lensing sample. For this sample we compare the dynamical velocity dispersion estimates with our estimates of the velocity dispersions made from gravitational lensing by fitting a singular isothermal sphere profile to the observed tangential weak lensing distortion as a function of radius. In all but two clusters, we find a good agreement between the velocity dispersion estimates based on spectroscopy and on weak lensing.Comment: 9 pages, 4 figures, accepted for publication in ApJ. Version in emulateapj format with only minor change

Periodic orbit quantization of the Sinai billiard in the small scatterer limit

We consider the semiclassical quantization of the Sinai billiard for disk radii R small compared to the wave length 2 pi/k. Via the application of the periodic orbit theory of diffraction we derive the semiclassical spectral determinant. The limitations of the derived determinant are studied by comparing it to the exact KKR determinant, which we generalize here for the A_1 subspace. With the help of the Ewald resummation method developed for the full KKR determinant we transfer the complex diffractive determinant to a real form. The real zeros of the determinant are the quantum eigenvalues in semiclassical approximation. The essential parameter is the strength of the scatterer c=J_0(kR)/Y_0(kR). Surprisingly, this can take any value between plus and minus infinity within the range of validity of the diffractive approximation kR <<4. We study the statistics exhibited by spectra for fixed values of c. It is Poissonian for |c|=infinity, provided the disk is placed inside a rectangle whose sides obeys some constraints. For c=0 we find a good agreement of the level spacing distribution with GOE, whereas the form factor and two-point correlation function are similar but exhibit larger deviations. By varying the parameter c from 0 to infinity the level statistics interpolates smoothly between these limiting cases.Comment: 17 pages LaTeX, 5 postscript figures, submitted to J. Phys. A: Math. Ge

Putting evolutionary biology back in the ecological theatre: a demographic framework mapping genes to communities

Question: How can we link genotypic, phenotypic, individual, population, and community levels of organization so as to illuminate general ecological and evolutionary processes and provide a framework for a quantitative, integrative evolutionary biology? Framework: We introduce an evolutionary framework that maps different levels of biological diversity onto one another. We provide (1) an overview of maps linking levels of biological organization and (2) a guideline of how to analyse the complexity of relationships from genes to population growth. Method: We specify the appropriate levels of biological organization for responses to selection, for opportunities for selection, and for selection itself. We map between them and embed these maps into an ecological setting

Teriparatide improves early callus formation in distal radial fractures: Analysis of a subgroup of patients within a randomized trial

Background Teriparatide (parathyreoid hormone; PTH 1-34) increases skeletal mass in humans and improves fracture healing in animals. A recent randomized multicenter trial of nonoperated distal radial fractures showed a moderate shortening of the time to restoration of cortical continuity by treatment with 20 μg (low-dose) teriparatide per day, but not with 40 μg (high-dose). As radiographic cortical continuity appears late in the healing process, perhaps too late for clinical relevance, we studied the qualitative appearance of the callus 5 weeks after fracture

Theory of the Eigler-swith

We suggest a simple model to describe the reversible field-induced transfer of a single Xe-atom in a scanning tunneling microscope, --- the Eigler-switch. The inelasticly tunneling electrons give rise to fluctuating forces on and damping of the Xe-atom resulting in an effective current dependent temperature. The rate of transfer is controlled by the well-known Arrhenius law with this effective temperature. The directionality of atom transfer is discussed, and the importance of use of non-equlibrium-formalism for the electronic environment is emphasized. The theory constitutes a formal derivation and generalization of the so-called Desorption Induced by Multiple Electron Transitions (DIMET) point of view.Comment: 13 pages (including 2 figures in separate LaTeX-files with ps-\specials), REVTEX 3.