Sampling a Littoral Fish Assemblage: Comparison of Small-Mesh Fyke Netting and Boat Electrofishing

We compared small-mesh (4-mm) fyke netting and boat electrofishing for sampling a littoral fish assemblage in Muskegon Lake, Michigan. We hypothesized that fyke netting selects for small-bodied fishes and electrofishing selects for large-bodied fishes. Three sites were sampled during May (2004 and 2005), July (2005 only), and September (2004 and 2005). We found that the species composition of captured fish differed considerably between fyke netting and electrofishing based on nonmetric multidimensional scaling (NMDS). Species strongly associated with fyke netting (based on NMDS and relative abundance) included the brook silverside Labidesthes sicculus, banded killifish Fundulus diaphanus, round goby Neogobius melanostomus, mimic shiner Notropis volucellus, and bluntnose minnow Pimephales notatus, whereas species associated with electrofishing included the Chinook salmon Oncorhynchus tshawytscha, catostomids (Moxostoma spp. and Catostomus spp.), freshwater drum Aplodinotus grunniens, walleye Sander vitreus, gizzard shad Dorosoma cepedianum, and common carp Cyprinus carpio. The total length of fish captured by electrofishing was 12.8 cm (95% confidence interval ¼ 5.5– 17.2 cm) greater than that of fish captured by fyke netting. Size selectivity of the gears contributed to differences in species composition of the fish captured, supporting our initial hypothesis. Thus, small-mesh fyke nets and boat electrofishers provided complementary information on a littoral fish assemblage. Our results support use of multiple gear types in monitoring and research surveys of fish assemblages. Copyright by the American Fisheries Society 2007, Originally published in the North American Journal of Fisheries Management 27: 825-831, 2007

A stability result for solitary waves in nonlinear dispersive equations

The stability of solitary traveling waves in a general class of conservative nonlinear dispersive equations is discussed

Superform formulation for vector-tensor multiplets in conformal supergravity

The recent papers arXiv:1110.0971 and arXiv:1201.5431 have provided a superfield description for vector-tensor multiplets and their Chern-Simons couplings in 4D N = 2 conformal supergravity. Here we develop a superform formulation for these theories. Furthermore an alternative means of gauging the central charge is given, making use of a deformed vector multiplet, which may be thought of as a variant vector-tensor multiplet. Its Chern-Simons couplings to additional vector multiplets are also constructed. This multiplet together with its Chern-Simons couplings are new results not considered by de Wit et al. in hep-th/9710212.Comment: 28 pages. V2: Typos corrected and references updated; V3: References updated and typo correcte

Improved radiant burner material. Final report

Under DOE/ERIP funds were made available to Superkinetic, Inc. for the development of an improved radiant burner material. Three single crystal ceramic fibers were produced and two fiber materials were made into felt for testing as radiant burner screens. The materials were alpha alumina and alpha silicon nitride. These fibers were bonded with a high temperature ceramic and made into a structurally sound trusswork like screen composed of million psi fiber members. These screens were about 5% solid for 95 porosity as needed to permit the flow of combustable natural gas and air mixture. Combustion test proved that they performed very satisfactory and better than the current state of art screen and showed no visable degrade after testing. It is recommended that more time and money be put into expanding this technology and test these new materials for their maximum temperature and durability for production applications that require better burner material

Using Metaphors in Dynamic Social Stratification Visualizations

We present three information visualizations for studying social stratification. Each Web-based applet uses a different metaphor to display U.S. Census income data along with the categories of race, marital status, and profession. Each system is completely dynamic, affording the user the choice of categorical variable to compare, as well as the choice of categories within each visualization. Two different user interfaces have also been implemented. The systems are described, compared, and their respective merits and deficiencies discussed

KP solitons in shallow water

The main purpose of the paper is to provide a survey of our recent studies on soliton solutions of the Kadomtsev-Petviashvili (KP) equation. The classification is based on the far-field patterns of the solutions which consist of a finite number of line-solitons. Each soliton solution is then defined by a point of the totally non-negative Grassmann variety which can be parametrized by a unique derangement of the symmetric group of permutations. Our study also includes certain numerical stability problems of those soliton solutions. Numerical simulations of the initial value problems indicate that certain class of initial waves asymptotically approach to these exact solutions of the KP equation. We then discuss an application of our theory to the Mach reflection problem in shallow water. This problem describes the resonant interaction of solitary waves appearing in the reflection of an obliquely incident wave onto a vertical wall, and it predicts an extra-ordinary four-fold amplification of the wave at the wall. There are several numerical studies confirming the prediction, but all indicate disagreements with the KP theory. Contrary to those previous numerical studies, we find that the KP theory actually provides an excellent model to describe the Mach reflection phenomena when the higher order corrections are included to the quasi-two dimensional approximation. We also present laboratory experiments of the Mach reflection recently carried out by Yeh and his colleagues, and show how precisely the KP theory predicts this wave behavior.Comment: 50 pages, 25 figure

Long range molecular dynamics study of regulation of eukaryotic glucosamine-6-phosphate synthase activity by UDP-GlcNAc

Glucosamine-6-phosphate (GlcN-6-P) synthase catalyses the first and practically irreversible step in hexosamine metabolism. The final product of this pathway, uridine 5’ diphospho N-acetyl-D-glucosamine (UDP-GlcNAc), is an essential substrate for assembly of bacterial and fungal cell walls. Moreover, the enzyme is involved in phenomenon of hexosamine induced insulin resistance in type II diabetes, which makes it a potential target for antifungal, antibacterial and antidiabetic therapy. The crystal structure of the isomerase domain of GlcN-6-P synthase from human pathogenic fungus Candida albicans, in complex with UDP-GlcNAc has been solved recently but it has not revealed the molecular mechanism of inhibition taking place under UDP-GlcNAc influence, the unique feature of the eukaryotic enzyme. UDP-GlcNAc is a physiological inhibitor of GlcN-6-P synthase, binding about 1 nm away from the active site of the enzyme. In the present work, comparative molecular dynamics simulations of the free and UDP-GlcNAc-bounded structures of GlcN-6-P synthase have been performed. The aim was to complete static X-ray structural data and detect possible changes in the dynamics of the two structures. Results of the simulation studies demonstrated higher mobility of the free structure when compared to the liganded one. Several amino acid residues were identified, flexibility of which is strongly affected upon UDP-GlcNAc binding. Importantly, the most fixed residues are those related to the inhibitor binding process and to the catalytic reaction. The obtained results constitute an important step toward understanding of mechanism of GlcN-6-P synthase inhibition by UDP-GlcNAc molecule

Finite-Element Analysis of the Eaves Joint of Cold-Formed Steel Portal Frames having Single Channel-Sections

A finite element model is described for the eaves joint of a cold-formed steel portal frame that comprises a single channel section for the column and rafters eaves connections. The members are connected to the brackets through both screws and bolts. Such a joint detail is commonly used in practice in New Zealand and Australia, where the function of the screws is to prevent slip of the joint during frame erection since the bolt holes are detailed for nominal clearance. The results of the finite element model are compared against two experimental test results. In both, the critical mode of failure is a combination of torsion of the eaves joint and shear failure of screws. It is found that at ultimate load, the bolts have not engaged i.e. they have slipped. It is shown that the stiffness of the joints can be accurately predicted from the equations of bolt and screw stiffness of Zaharia and Dubina (2000). It is also shown that the finite element model can be used to determine both an upper and lower bound to the failure load