17 research outputs found
Points, Walls and Loops in Resonant Oscillatory Media
In an experiment of oscillatory media, domains and walls are formed under the
parametric resonance with a frequency double the natural one. In this bi-stable
system, %phase jumps by crossing walls. a nonequilibrium transition from
Ising wall to Bloch wall consistent with prediction is confirmed
experimentally. The Bloch wall moves in the direction determined by its
chirality with a constant speed. As a new type of moving structure in
two-dimension, a traveling loop consisting of two walls and Neel points is
observed.Comment: 9 pages (revtex format) and 6 figures (PostScript
Pattern formation in directional solidification under shear flow. I: Linear stability analysis and basic patterns
An asymptotic interface equation for directional solidification near the
absolute stabiliy limit is extended by a nonlocal term describing a shear flow
parallel to the interface. In the long-wave limit considered, the flow acts
destabilizing on a planar interface. Moreover, linear stability analysis
suggests that the morphology diagram is modified by the flow near the onset of
the Mullins-Sekerka instability. Via numerical analysis, the bifurcation
structure of the system is shown to change. Besides the known hexagonal cells,
structures consisting of stripes arise. Due to its symmetry-breaking
properties, the flow term induces a lateral drift of the whole pattern, once
the instability has become active. The drift velocity is measured numerically
and described analytically in the framework of a linear analysis. At large flow
strength, the linear description breaks down, which is accompanied by a
transition to flow-dominated morphologies, described in a companion paper.
Small and intermediate flows lead to increased order in the lattice structure
of the pattern, facilitating the elimination of defects. Locally oscillating
structures appear closer to the instability threshold with flow than without.Comment: 20 pages, Latex, accepted for Physical Review
Identification of a Novel Gene Product That Promotes Survival of Mycobacterium smegmatis in Macrophages
BACKGROUND: Bacteria of the suborder Corynebacterineae include significant human pathogens such as Mycobacterium tuberculosis and M. leprae. Drug resistance in mycobacteria is increasingly common making identification of new antimicrobials a priority. Mycobacteria replicate intracellularly, most commonly within the phagosomes of macrophages, and bacterial proteins essential for intracellular survival and persistence are particularly attractive targets for intervention with new generations of anti-mycobacterial drugs. METHODOLOGY/PRINCIPAL FINDINGS: We have identified a novel gene that, when inactivated, leads to accelerated death of M. smegmatis within a macrophage cell line in the first eight hours following infection. Complementation of the mutant with an intact copy of the gene restored survival to near wild type levels. Gene disruption did not affect growth compared to wild type M. smegmatis in axenic culture or in the presence of low pH or reactive oxygen intermediates, suggesting the growth defect is not related to increased susceptibility to these stresses. The disrupted gene, MSMEG_5817, is conserved in all mycobacteria for which genome sequence information is available, and designated Rv0807 in M. tuberculosis. Although homology searches suggest that MSMEG_5817 is similar to the serine:pyruvate aminotransferase of Brevibacterium linens suggesting a possible role in glyoxylate metabolism, enzymatic assays comparing activity in wild type and mutant strains demonstrated no differences in the capacity to metabolize glyoxylate. CONCLUSIONS/SIGNIFICANCE: MSMEG_5817 is a previously uncharacterized gene that facilitates intracellular survival of mycobacteria. Interference with the function of MSMEG_5817 may provide a novel therapeutic approach for control of mycobacterial pathogens by assisting the host immune system in clearance of persistent intracellular bacteria