Seleção de genótipos brasileiros de soja com alto potencial para embriogênese somática e regeneração de plantas

The aim of this work was to identify Brazilian soybean (Glycine max) genotypes with potential to respond to in vitro culture stimuli for primary somatic embryo induction, secondary embryo proliferation and plant regeneration. Differences among eight tested cultivars were observed at each stage. Two cultivars, IAS-5 and BRSMG 68 Vencedora, were selected for the evaluation of the capacity for embryo differentiation and plant regeneration. These cultivars had high embryo induction frequencies, repetitive embryogenic proliferation, and low precocious embryo germination in the initial experiment. The effect of abscisic acid (ABA) and charcoal addition on plant regeneration was investigated. The addition of ABA to proliferation medium and of ABA and activated charcoal to maturation medium increased embryo differentiation rates, which resulted in a higher number of regenerated plants. The BRSMG 68 Vencedora cultivar was found to have a high potential for embryo induction, embryo proliferation and plant regeneration. The potential of this cultivar for somatic embryogenesis was similar to that observed for cultivar IAS-5, which is currently used for soybean transformation in Brazil. BRSMG 68 Vencedora may be a good alternative genotype for soybean genetic engineering via somatic embryogenesis protocols.O objetivo deste trabalho foi identificar cultivares brasileiras de soja (Glycine max) com capacidade de resposta aos estímulos da cultura in vitro para a indução de embriões somáticos primários, proliferação de embriões secundários e regeneração de plantas. Foram observadas diferenças para cada estádio entre as oito cultivares testadas. Foram selecionadas duas cultivares, 'IAS-5' e BRSMG 68 Vencedora, para avaliação do potencial dos embriões quanto à diferenciação e conversão em plantas. Essas cultivares tiveram altas taxas de indução, proliferação embriogênica repetitiva e baixa germinação precoce dos embriões, no experimento inicial. Foi investigado o efeito da adição de ácido abscísico (ABA) e carvão sobre a regeneração. Os resultados mostraram que a adição de ABA ao meio de proliferação e de ABA e carvão ativado ao meio de maturação aumentaram as taxas de diferenciação dos embriões, o que resultou em maior número de plantas regeneradas. A cultivar BRSMG 68 Vencedora foi identificada como genótipo com alto potencial para indução e proliferação de embriões, bem como para regeneração de plantas. O potencial dessa cultivar quanto à embriogênese somática foi similar ao observado para a cultivar IAS-5, atualmente utilizada para transformação de soja no Brasil. A BRSMG 68 Vencedora pode ser um genótipo alternativo para a engenharia genética de soja via protocolos de embriogênese somática

Caracterização de genes codificantes de proteínas ASR (Aba, Stress and Ripening) de soja (Glycine max (L.) Merrill) com potencial para conferir menor suscetibilidade ao déficit hídrico

Um grande empecilho para a manutenção e estabilidade da produção nacional de soja reside na suscetibilidade dos diferentes genótipos aos estresses ambientais. Tendo em vista a importância social e econômica da leguminosa e os efeitos extremamente danosos dos estresses abióticos sobre a agricultura, faz-se necessário maior conhecimento acerca das interações entre os estímulos estressores e as respostas da planta. A seca é considerada o principal fator limitante na produtividade agrícola. Sendo assim, a identificação e caracterização de genes responsivos a essa condição é um passo inicial na compreensão das respostas adaptativas ao déficit hídrico. Os genes Asr (ABA, Stress and Ripening) são induzidos por estresse e ácido abscísico (ABA) e seus níveis de expressão são rapidamente aumentados em resposta à salinidade e seca. Nesse estudo os genes da família Asr de soja foram clonados. Estas proteínas são hidrofílicas e ricas nos aminoácidos Ala, His, Glu e Lis, apresentando homologia com ASRs de outras plantas, como atestado nas análises de múltiplos alinhamentos. O perfil de expressão foi avaliado através de RT-qPCR em tempo real e revelou que Asr1 tem um distinto padrão de indução no nível de transcritos em folha sob tratamento com ABA, sal e seca, enquanto Asr3 apresenta padrão distinto de indução na expressão em raiz, sob tratamento com ABA e seca. Além disto, foram construídos vetores para a superexpressão e localização subcelular das proteínas ASR1, ASR2 e ASR3 em plantas. Plantas de Arabidopsis thaliana foram submetidas a um protocolo de transformação genética mediada por Agrobacterium.One of the major obstacles to maintain the stability of the national production of soybean (Glycine max) lies on the susceptibility of different genotypes to abiotic stress. In view of the social and economic importance of soybean and due to the extremely harmful effects of stress in agriculture, detailed knowledge of the interaction between these stresses and plant response to environmental stimuli is necessary. Drought is considered the main abiotic limitation factor for agricultural productivity. Identification and characterization of responsive genes to this condition is an initial step in understanding the adaptive responses to drought. The Asr (ABA, Stress and Ripening) genes are induced by stress and abscisic acid (ABA) in plants, and their expression levels are quickly increased in response to salinity and drought. In this study Asr genes from Glycine max were cloned. These proteins were found to be hydrophilic and rich in amino acids Ala, His, Glu and Lys, showing homology with those of other plant Asr genes via multiple alignment analysis. RT-qPCR analyses revealed that Asr1 had a distinct up-regulated transcript pattern in leaf under ABA, NaCl and drought treatments, while Asr3 had a distinct up-regulated transcript pattern in root under ABA and drought treatments. Besides, vectors for ASR1, ASR2 and ASR3 proteins overexpression and subcellular localization in plants were constructed. Arabidopsis thaliana plants were submitted to an Agrobacterium-mediated transformation procedure

Estudo do fator de transcrição ASR5 em plantas de arroz (Oryza sativa) e identificação de proteínas em resposta ao estresse por alumínio em Arabidopsis thaliana

As plantas são organismos sésseis que continuamente enfrentam situações ambientais adversas, o que acarreta em reduções significativas da biomassa e da produtividade. O trabalho, aqui exposto, teve como objetivo avaliar o papel dos fatores de transcrição ASR (do ingles ABA, stress and ripening) na resposta a estresses abióticos em plantas de arroz. Também teve como objetivo avaliar as respostas de plantas de Arabidopsis thaliana ao estresse produzido nos momentos iniciais da exposição ao metal alumínio. O capítulo 1 da presente tese, compara a expressão de miRNAs entre plantas silenciadas para o gene ASR5 (ASR5_RNAi) e plantas não transformadas (controle). De um total de 279 miRNAs maduros identificados, distribuídos em 60 famílias, 159 foram diferencialmente expressos quando as duas bibliotecas foram comparadas. Uma correlação negativa entre o MIR167 e seu gene alvo (LOC_Os07g29820) também foi confirmada por PCR em tempo real. Este é o primeiro trabalho sugerindo o envolvimento das proteínas ASR na regulação da expressão de miRNAs em planta. O segundo capítulo apresenta o estudo das proteínas ASR na manutenção da homeostase do pH em plantas de arroz. Verificou-se uma diminuição do crescimento radicular em plantas silenciadas em solução ácida, quando comparadas com plantas não transformadas nas mesmas condições. Também foi analisada a viabilidade da ponta de raízes quanto ao dano causado pelo baixo pH e diferentes concentrações de Ca+2, demonstrando que a adição de CaCl2 é capaz de aliviar o efeito tóxico do excesso de protons H+. Diversos genes reprimidos nas plantas silenciadas e envolvidos no mecanismo de manutenção do pH em células vegetais, também foram investigados. O terceiro e último capítulo é dedicado ao estudo da resposta inicial de plantas de Arabidopsis thaliana ao estresse por alumínio. Plantas com 7 dias de idade foram expostas a uma concentração de 25 μM de AlCl3 durante 3 horas e modificações na abundância de proteínas foi investigada com a técnica de espectrometria de massa. Um total de 3.213 proteínas foram identificadas, sendo que destas, 293 apresentaram variação no nível de expressão. Diversas proteínas com expressão induzida são funcionalmente associadas com a detoxificação de espécies reativas de oxigênio (ROS), indicando que o tratamento ocasionou estresse oxidativo nas raízes de A. thaliana. Também foram identificadas uma proteína mitocondrial carreadora de substrato e uma acyl-CoA oxidase com possível papel nos mecanismos de defesa em resposta a alumínio e com potencial para futuros estudos funcionais na planta modelo. De uma maneira geral, os resultados aqui apresentados mostram, pela primeira vez, que ASR5 está envolvida na regulação de miRNAs e na homeostase do pH em plantas de arroz, além de identificar proteínas responsivas ao estresse por alumínio em A. thaliana.Plants are sessile organisms that continuously face adverse environmental situations, leading to a significant reduction in biomass and yield. The aim of the present work was to further study the ASR (ABA, stress and ripening) transcription factors in rice plants. Moreover, the responses of Arabidopsis thaliana to aluminum stress were also analyzed. The chapter 1 of this thesis compares the expression of mature miRNAs in the ASR5 silenced plants (ASR5_RNAi) and in non-transformed plants (control). From a total of 279 mature miRNA of 60 families, 159 were differentially expressed. A negative correlation of MIR167 and its target gene (LOC_Os07g29820) was also confirmed by real time RT-qPCR. This is the first report showing the involvement of ASR proteins in miRNA gene expression regulation. The second chapter presents the study of participation of ASR proteins in the maintenance of pH homeostasis in rice plants. The evaluation of root growth in ASR5_RNAi plants upon acid solution showed inhibition of root growth when compared to non-transformed plants in the same condition. Root tip feasibility and damage caused by low pH and different concentrations of Ca+2 was also analyzed. The results indicate that addition of CaCl2 is capable of alleviating the toxic effects of H+ protons. Several genes downregulated in silenced plants and involved in pH maintenance in plant cells have also been investigated. This work demonstrates the importance of ASR transcription factors in a biological process not yet described. The third and final chapter describes the study of the initial response of Arabidopsis thaliana to aluminum stress. Seven-day old seedlings were treated with 25 μM AlCl3 for 3 hours and submitted to quantitative analyses by mass spectrometry. A total of 3,213 proteins were identified, from which 293 proteins were differentially responsive upon aluminum treatment. Several proteins with increased expression in response to the treatment are functionally associated with reactive oxygen species (ROS), indicating that the Al3+ exposure caused oxidative stress in the roots of A. thaliana. A mitochondrial substrate carrier (At1g78180) and an acyl-CoA oxidase (At3g51840) with a putative role in Al defense were also up-regulated and constitute interesting targets for functional studies of aluminum toxicity in the model plant. Overall, the results here presented show for the first time that ASR5 is involved in miRNA and pH homeostases regulation in rice plants and also identify proteins responsive to aluminum stress in A. thaliana

Interactions between plant hormones and heavy metals responses

Heavy metals are natural non-biodegradable constituents of the Earth’s crust that accumulate and persist indefinitely in the ecosystem as a result of human activities. Since the industrial revolution, the concentration of cadmium, arsenic, lead, mercury and zinc, amongst others, have increasingly contaminated soil and water resources, leading to significant yield losses in plants. These issues have become an important concern of scientific interest. Understanding the molecular and physiological responses of plants to heavy metal stress is critical in order to maximize their productivity. Recent research has extended our view of how plant hormones can regulate and integrate growth responses to various environmental cues in order to sustain life. In the present review we discuss current knowledge about the role of the plant growth hormones abscisic acid, auxin, brassinosteroid and ethylene in signaling pathways, defense mechanisms and alleviation of heavy metal toxicity

Interactions between plant hormones and heavy metals responses

Heavy metals are natural non-biodegradable constituents of the Earth’s crust that accumulate and persist indefinitely in the ecosystem as a result of human activities. Since the industrial revolution, the concentration of cadmium, arsenic, lead, mercury and zinc, amongst others, have increasingly contaminated soil and water resources, leading to significant yield losses in plants. These issues have become an important concern of scientific interest. Understanding the molecular and physiological responses of plants to heavy metal stress is critical in order to maximize their productivity. Recent research has extended our view of how plant hormones can regulate and integrate growth responses to various environmental cues in order to sustain life. In the present review we discuss current knowledge about the role of the plant growth hormones abscisic acid, auxin, brassinosteroid and ethylene in signaling pathways, defense mechanisms and alleviation of heavy metal toxicity

The Lesion Simulating Disease (LSD) gene family as a variable in soybean response to PHAKOPSORA pachyrhizi infection and dehydration

The Lesion Simulating Disease (LSD) genes encode a family of zinc finger proteins that are reported to play an important role in the hypersensitive response and programmed cell death (PCD) that are caused by biotic and abiotic stresses. In the present study, 117 putative LSD family members were identified in Viridiplantae. Genes with one, two, or three conserved LSD domains were identified. Proteins with three LSD domains were highly represented in the species analyzed and were present in basal organisms. Proteins with two LSD domains were identified only in the Embryophyte clade, and proteins possessing one LSD domain were highly represented in grass species. Expression analyses of Glycine max LSD (GmLSD) genes were performed by realtime quantitative polymerase chain reaction. The results indicated that GmLSD genes are not ubiquitously expressed in soybean organs and that their expression patterns are instead organ-dependent. The expression of the majority of GmLSD genes is modulated in soybean during Phakopsora pachyrhizi infection. In addition, the expression of some GmLSD genes is modulated in plants under dehydration stress. These results suggest the involvement of GmLSD genes in the response of soybean to both biotic and abiotic stresses

Identification and in silico characterization of soybean trihelix-GT and bHLH transcription factors involved in stress responses

Environmental stresses caused by either abiotic or biotic factors greatly affect agriculture. As for soybean [Glycine max (L.) Merril], one of the most important crop species in the world, the situation is not different. In order to deal with these stresses, plants have evolved a variety of sophisticated molecular mechanisms, to which the transcriptional regulation of target-genes by transcription factors is crucial. Even though the involvement of several transcription factor families has been widely reported in stress response, there still is a lot to be uncovered, especially in soybean. Therefore, the objective of this study was to investigate the role of bHLH and trihelix-GT transcription factors in soybean responses to environmental stresses. Gene annotation, data mining for stress response, and phylogenetic analysis of members from both families are presented herein. At least 45 bHLH (from subgroup 25) and 63 trihelix-GT putative genes reside in the soybean genome. Among them, at least 14 bHLH and 11 trihelix-GT seem to be involved in responses to abiotic/biotic stresses. Phylogenetic analysis successfully clustered these with members from other plant species. Nevertheless, bHLH and trihelix-GT genes encompass almost three times more members in soybean than in Arabidopsis or rice, with many of these grouping into new clades with no apparent near orthologs in the other analyzed species. Our results represent an important step towards unraveling the functional roles of plant bHLH and trihelix-GT transcription factors in response to environmental cues

Identification and in silico characterization of soybean trihelix-GT and bHLH transcription factors involved in stress responses

Environmental stresses caused by either abiotic or biotic factors greatly affect agriculture. As for soybean [Glycine max (L.) Merril], one of the most important crop species in the world, the situation is not different. In order to deal with these stresses, plants have evolved a variety of sophisticated molecular mechanisms, to which the transcriptional regulation of target-genes by transcription factors is crucial. Even though the involvement of several transcription factor families has been widely reported in stress response, there still is a lot to be uncovered, especially in soybean. Therefore, the objective of this study was to investigate the role of bHLH and trihelix-GT transcription factors in soybean responses to environmental stresses. Gene annotation, data mining for stress response, and phylogenetic analysis of members from both families are presented herein. At least 45 bHLH (from subgroup 25) and 63 trihelix-GT putative genes reside in the soybean genome. Among them, at least 14 bHLH and 11 trihelix-GT seem to be involved in responses to abiotic/biotic stresses. Phylogenetic analysis successfully clustered these with members from other plant species. Nevertheless, bHLH and trihelix-GT genes encompass almost three times more members in soybean than in Arabidopsis or rice, with many of these grouping into new clades with no apparent near orthologs in the other analyzed species. Our results represent an important step towards unraveling the functional roles of plant bHLH and trihelix-GT transcription factors in response to environmental cues