Null cyp1b1 Activity in Zebrafish Leads to Variable Craniofacial Defects Associated with Altered Expression of Extracellular Matrix and Lipid Metabolism Genes

CYP1B1 loss of function (LoF) is the main known genetic alteration present in recessive primary congenital glaucoma (PCG), an infrequent disease characterized by delayed embryonic development of the ocular iridocorneal angle; however, the underlying molecular mechanisms are poorly understood. To model CYP1B1 LoF underlying PCG, we developed a cyp1b1 knockout (KO) zebrafish line using CRISPR/Cas9 genome editing. This line carries the c.535_667del frameshift mutation that results in the 72% mRNA reduction with the residual mRNA predicted to produce an inactive truncated protein (p.(His179Glyfs*6)). Microphthalmia and jaw maldevelopment were observed in 23% of F0 somatic mosaic mutant larvae (144 hpf). These early phenotypes were not detected in cyp1b1-KO F3 larvae (144 hpf), but 27% of adult (four months) zebrafish exhibited unior bilateral craniofacial alterations, indicating the existence of incomplete penetrance and variable expressivity. These phenotypes increased to 86% in the adult offspring of inbred progenitors with craniofacial defects. No glaucoma-related phenotypes were observed in cyp1b1 mutants. Transcriptomic analyses of the offspring (seven dpf) of cyp1b1-KO progenitors with adult-onset craniofacial defects revealed functionally enriched differentially expressed genes related to extracellular matrix and cell adhesion, cell growth and proliferation, lipid metabolism (retinoids, steroids and fatty acids and oxidation–reduction processes that include several cytochrome P450 genes) and inflammation. In summary, this study shows the complexity of the phenotypes and molecular pathways associated with cyp1b1 LoF, with species dependency, and provides evidence for the dysregulation of extracellular matrix gene expression as one of the mechanisms underlying the pathogenicity associated with cyp1b1 disruption

Transgenic Overexpression of Myocilin Leads to Variable Ocular Anterior Segment and Retinal Alterations Associated with Extracellular Matrix Abnormalities in Adult Zebrafish

Myocilin is an enigmatic glaucoma-associated glycoprotein whose biological role remains incompletely understood. To gain novel insight into its normal function, we used transposon-mediated transgenesis to generate the first zebrafish line stably overexpressing myocilin [Tg(actb1:myoc-2A-mCherry)]. qPCR showed an approximately four-fold increased myocilin expression in transgenic zebrafish embryos (144 hpf). Adult (13 months old) transgenic animals displayed variable and age-dependent ocular anterior segment alterations. Almost 60% of two-year-old male, but not female, transgenic zebrafish developed enlarged eyes with severe asymmetrical and variable abnormalities in the anterior segment, characterized by corneal limbus hypertrophy, and thickening of the cornea, iris, annular ligament and lens capsule. The most severe phenotype presented small or absent ocular anterior chamber and pupils, due to iris overgrowth along with dysplastic retinal growth and optic nerve hypertrophy. Immunohistochemistry revealed increased presence of myocilin in most altered ocular tissues of adult transgenic animals, as well as signs of retinal gliosis and expanded ganglion cells and nerve fibers. The preliminary results indicate that these cells contributed to retinal dysplasia. Visual impairment was demonstrated in all old male transgenic zebrafish. Transcriptomic analysis of the abnormal transgenic eyes identified disrupted expression of genes involved in lens, muscular and extracellular matrix activities, among other processes. In summary, the developed transgenic zebrafish provides a new tool to investigate this puzzling protein and provides evidence for the role of zebrafish myocilin in ocular anterior segment and retinal biology, through the influence of extracellular matrix organization and cellular proliferation.This research was funded by research grants from the “Instituto de Salud Carlos III/European Regional Development Fund (ERDF)” (PI19/00208 and RD16/0008/0019, OFTARED), the Regional Ministry of Science and Technology of the Board of the Communities of “Castilla-La Mancha” (SBPLY/17/180501/000404; http://www.educa.jccm.es/idiuniv/es, accessed on 3 March 2022) and research funds from Universidad de Castilla-La Mancha (2019-GRIN-26945). A.T. was recipient of a predoctoral contract from Castilla-La Mancha University (Ref.: 2020-PREDUCLM-16605)

Knockout of myoc Provides Evidence for the Role of Myocilin in Zebrafish Sex Determination Associated with Wnt Signalling Downregulation

Myocilin is a secreted glycoprotein with a poorly understood biological function and it is mainly known as the first glaucoma gene. To explore the normal role of this protein in vivo we developed a myoc knockout (KO) zebrafish line using CRISPR/Cas9 genome editing. This line carries a homozygous variant (c.236_239delinsAAAGGGGAAGGGGA) that is predicted to result in a loss-of-function of the protein because of a premature termination codon p.(V75EfsX60) that resulted in a significant reduction of myoc mRNA levels. Immunohistochemistry showed the presence of myocilin in wild-type embryonic (96 h post-fertilization) anterior segment eye structures and caudal muscles. The protein was also detected in different adult ocular and non-ocular tissues. No gross macroscopic or microscopic alterations were identified in the KO zebrafish, but, remarkably, we observed absence of females among the adult KO animals and apoptosis in the immature juvenile gonad (28 dpf) of these animals, which is characteristic of male development. Transcriptomic analysis showed that adult KO males overexpressed key genes involved in male sex determination and presented differentially expressed Wnt signalling genes. These results show that myocilin is required for ovary differentiation in zebrafish and provides in vivo support for the role of myocilin as a Wnt signalling pathway modulator. In summary, this myoc KO zebrafish line can be useful to investigate the elusive function of this protein, and it provides evidence for the unexpected function of myocilin as a key factor in zebrafish sex determination

Role of GUCA1C in Primary Congenital Glaucoma and in the Retina: Functional Evaluation in Zebrafish

Primary congenital glaucoma (PCG) is a heterogeneous, inherited, and severe optical neuropathy caused by apoptotic degeneration of the retinal ganglion cell layer. Whole-exome sequencing analysis of one PCG family identified two affected siblings who carried a low-frequency homozygous nonsense GUCA1C variant (c.52G > T/p.Glu18Ter/rs143174402). This gene encodes GCAP3, a member of the guanylate cyclase activating protein family, involved in phototransduction and with a potential role in intraocular pressure regulation. Segregation analysis supported the notion that the variant was coinherited with the disease in an autosomal recessive fashion. GCAP3 was detected immunohistochemically in the adult human ocular ciliary epithelium and retina. To evaluate the ocular effect of GUCA1C loss-of-function, a guca1c knockout zebrafish line was generated by CRISPR/Cas9 genome editing. Immunohistochemistry demonstrated the presence of GCAP3 in the non-pigmented ciliary epithelium and retina of adult wild-type fishes. Knockout animals presented up-regulation of the glial fibrillary acidic protein in Müller cells and evidence of retinal ganglion cell apoptosis, indicating the existence of gliosis and glaucoma-like retinal damage. In summary, our data provide evidence for the role of GUCA1C as a candidate gene in PCG and offer new insights into the function of this gene in the ocular anterior segment and the retina.This research was funded by research grants from the “Instituto de Salud Carlos III/European Regional Development Fund (ERDF)” (PI15/01193, PI19/00208 and RD16/0008/0019, OFTARED), the Regional Ministry of Science and Technology of the Board of the Communities of “Castilla-La Mancha” (SBPLY/17/180501/000404; http://www.educa.jccm.es/idiuniv/es). SA-M was sponsored by the Regional Ministry of Science and Technology of the Board of the Communities of “Castilla-La Mancha” (PREJCCM2016/28)

CPAMD8 loss-of-function underlies non-dominant congenital glaucoma with variable anterior segment dysgenesis and abnormal extracellular matrix

Abnormal development of the ocular anterior segment may lead to a spectrum of clinical phenotypes ranging from primary congenital glaucoma (PCG) to variable anterior segment dysgenesis (ASD). The main objective of this study was to identify the genetic alterations underlying recessive congenital glaucoma with ASD (CG-ASD). Next-generation DNA sequencing identified rare biallelic CPAMD8 variants in four patients with CG-ASD and in one case with PCG. CPAMD8 is a gene of unknown function and recently associated with ASD. Bioinformatic and in vitro functional evaluation of the variants using quantitative reverse transcription PCR and minigene analysis supported a loss-of-function pathogenic mechanism. Optical and electron microscopy of the trabeculectomy specimen from one of the CG-ASD cases revealed an abnormal anterior chamber angle, with altered extracellular matrix, and apoptotic trabecular meshwork cells. The CPAMD8 protein was immunodetected in adult human ocular fluids and anterior segment tissues involved in glaucoma and ASD (i.e., aqueous humor, non-pigmented ciliary epithelium, and iris muscles), as well as in periocular mesenchyme-like cells of zebrafish embryos. CRISPR/Cas9 disruption of this gene in F0 zebrafish embryos (96 hpf) resulted in varying degrees of gross developmental abnormalities, including microphthalmia, pharyngeal maldevelopment, and pericardial and periocular edemas. Optical and electron microscopy examination of these embryos showed iridocorneal angle hypoplasia (characterized by altered iris stroma cells, reduced anterior chamber, and collagen disorganized corneal stroma extracellular matrix), recapitulating some patients’ features. Our data support the notion that CPAMD8 loss-of-function underlies a spectrum of recessive CG-ASD phenotypes associated with extracellular matrix disorganization and provide new insights into the normal and disease roles of this gene

Análisis funcional del gen MYOC en el pez cebra: implicaciones en la determinación sexual y en alteraciones oculares

El gen MYOC es conocido principalmente por ser el primer gen implicado en glaucoma primario de ángulo abierto (GPAA). El glaucoma es un conjunto de neuropatías ópticas caracterizadas por la muerte apoptótica progresiva de los axones de las células ganglionares de la retina, que pueden provocar una grave reducción del campo visual y ceguera. El gen MYOC consta de tres exones y codifica una glicoproteína de 504 aminoácidos llamada miocilina, con un peso molecular de 55-57 KDa y con una función biológica poco conocida. En el ojo, esta proteína está presente en el humor acuoso y en la matriz extracelular de la red trabecular. El glaucoma producido por mutaciones en el gen MYOC se caracteriza, generalmente, por un desarrollo juvenil y un gran aumento de la presión intraocular (PIO). Se cree que las variantes patogénicas conducen a una ganancia de función tóxica debido al plegamiento anómalo y la agregación intracelular de la proteína mutante. La mayoría de las mutaciones de MYOC que se han identificado en pacientes con GPAA están localizadas en su dominio olfactomedina carboxilo terminal, que está muy conservado filogenéticamente. A pesar de conocerse la participación del gen MYOC en esta patología desde hace más de 20 años, tanto el mecanismo patogénico como su función normal son todavía desconocidos. Así pues, el objetivo general de este trabajo fue analizar en profundidad la función fisiológica de este gen utilizando el pez cebra como modelo animal. Para ello, en primer lugar, se desarrolló una línea knock-out (KO) de myoc en el pez cebra mediante edición genómica con el sistema CRISPR/Cas9. Dicha línea es portadora de una variante que consistía en una deleción de 4 nucleótidos e inserción de 14 (c.236_239delinsAAAGGGGAAGGGGA), provocando un desplazamiento de la pauta de lectura y una pérdida de función de la proteína mutante debido a un codón prematuro de terminación p.(V75EfsX60). El análisis mediante PCR cuantitativa a tiempo real (qRT-PCR) mostró una reducción significativa del 80% de la expresión del ARN mensajero (ARNm) de myoc en los peces homocigotos con respecto a los silvestres (WT, wild type). El análisis de expresión de miocilina mediante inmunohistoquímica fluorescente "in toto" de embriones silvestres completos a las 96 horas post-fecundación (hpf) mostró la presencia de la proteína en estructuras oculares del segmento anterior y en los músculos caudales. En adultos también se detectó en diferentes tejidos oculares y no oculares tales como músculo faríngeo, intestino, ovario y testículos. No se identificaron alteraciones macroscópicas ni microscópicas en los peces cebra homocigotos, no obstante, el fenotipo observado en esta línea fue la ausencia de hembras entre los animales adultos. El análisis transcriptómico de los peces KO de myoc mostró una expresión alterada de genes clave en la determinación del sexo masculino, indicando que miocilina es necesaria para la diferenciación de los ovarios en el pez cebra. Para continuar explorando su función, se generó mediante transgénesis mediada por el transposón Tol2 una línea de pez cebra Tg(actb1:myoc-2A-mCherry) que sobreexpresaba constitutivamente miocilina. Los ensayos de qRT-PCR mostraron un incremento de aproximadamente cuatro veces del ARNm de myoc en los embriones de pez cebra transgénicos (144 hpf) en comparación con los silvestres. Casi el 60% de los peces transgénicos de 2 años desarrollaron ojos agrandados con graves anomalías asimétricas y variables del segmento anterior, crecimiento displásico de la retina e hipertrofia del nervio óptico. El análisis de peces transgénicos de la generación F4, aunque no mostró alteraciones oculares significativas en larvas, confirmó la aparición de alteraciones oculares variables (sobrecrecimiento del iris y un engrosamiento del estroma corneal) a partir de los 13 meses de edad. La inmunohistoquímica de peces transgénicos de 2 años reveló una mayor presencia de miocilina en la mayoría de los tejidos oculares alterados, así como signos de gliosis retiniana y expansión de las células ganglionares y las fibras nerviosas, lo que indica que estas células contribuyeron a la displasia de la retina. Además, el ensayo TUNEL (Terminal deoxynucleotidyl transferase (TdT) dUTP Nick- End Labeling) mostró evidencias de apoptosis en las células ganglionares de la retina y en la capa externa del epitelio de la córnea, indicando la existencia de muerte celular. En todos los peces cebra transgénicos de 2 años se demostró la existencia de un deterioro visual. El análisis transcriptómico de los ojos transgénicos con alteraciones de estos peces mostró una expresión alterada de genes implicados en las vías relacionadas con el cristalino, músculos y matriz extracelular, entre otros procesos, mientras que el análisis de los ojos aparentemente normales mostró genes diferencialmente expresados implicados en metabolismo lipídico, sistema inmune y adhesión celular. En resumen, los resultados de este trabajo muestran que el pez cebra proporciona una nueva y potente herramienta para investigar la función de miocilina, aportando información sobre sus propiedades biológicas. Los estudios realizados apoyan la función de miocilina como una proteína matricelular que podría jugar un papel en la determinación del sexo del pez cebra, así como en la morfología del segmento anterior ocular y de la retina a través de la modulación de la organización de la matriz extracelular y la proliferación celular

Matrix Metalloproteinase Genes and Glaucoma

Childhood glaucoma encompasses congenital and juvenile primary glaucoma, which are heterogeneous, uncommon, and irreversible optic neuropathies leading to visual impairment with poorly understood genetic basis. Our goal was to identify gene variants associated with these glaucoma types by assessing the mutational burden in 76 matrix metalloproteinase-related genes. We studied 101 childhood glaucoma patients with no identified monogenic alterations using next-generation sequencing. Gene expression was assessed through immunohistochemistry. Functional analysis of selected gene variants was conducted in cultured cells and in zebrafish. Patients presented a higher proportion of rare variants in four metalloproteinase-related genes, including CPAMD8 and ADAMTSL4, compared to controls. ADAMTSL4 protein expression was observed in the anterior segment of both the adult human and zebrafish larvae's eye, including tissues associated with glaucoma. In HEK-293T cells, expression of four ADAMTSL4 variants identified in this study showed that two variants (p.Arg774Trp and p.Arg98Trp) accumulated intracellularly, inducing endoplasmic reticulum stress. Additionally, overexpressing these ADAMTSL4 variants in zebrafish embryos confirmed partial loss-of-function effects for p.Ser719Leu and p.Arg1083His. Double heterozygous functional suppression of adamtsl4 and cpamd8 zebrafish orthologs resulted in reduced volume of both the anterior eye chamber and lens within the chamber, supporting a genetic interaction between these genes. Our findings suggest that accumulation of partial functional defects in matrix metalloproteinases-related genes may contribute to increased susceptibility to early-onset glaucoma and provide further evidence supporting the notion of a complex genetic inheritance pattern underlying the disease.European Regional Development FundComunidad de Castilla-La Mancha (España)Universidad de Castilla-La Mancha (España)Comunidad Valenciana (España)Unidad Docente de Inmunología, Oftalmología y ORLDepto. de Inmunología, Oftalmología y ORLFac. de Óptica y OptometríaInstituto de Investigaciones Oftalmológicas Ramón CastroviejoFALSEsubmitte