Impact of different fertilisers on elemental content in young hybrid aspen stem wood

The biomass production using fast-growing tree species such as hybrid aspen (Populus tremuloides Michx. x Populus tremula L.) has been recognized as an environmentally friendly and cost-effective approach. Growing these species can reduce the negative impact of earlier land mismanagement and at the same time provide additional biomass growth. The application of fertilisers may introduce not only the necessary macro elements (N, P, K) but also significant amounts of toxic heavy metals. Therefore, the knowledge about elemental flows from fertilised soil to the different parts of hybrid aspen trees is essential and especially meaningful for the evaluation of element content in specific environmental ecosystems. The impact of different fertilisers (sewage sludge, digestate and wood ash) on the concentrations of micro- and macro elements in the wood of six-year-old hybrid aspen stands grown on former agricultural land was studied. The determination of element concentrations in different tree rings of hybrid aspen trees was accomplished by inductively coupled plasma mass spectrometry (ICP–MS). Isotope ratio mass spectrometry (IRMS) was used to determine the nitrogen and carbon content and isotope ratios in different parts of hybrid aspen trees. Stem disc samples from hybrid aspen trees were obtained from agricultural land in the central part of Latvia. Samples were taken from six-yearold hybrid aspen trees that at the moment of planting were fertilised with sewage sludge, a residue of biogas production (digestate) and wood ash. The obtained results indicated that the chemical element accumulation in hybrid aspen was affected by the applied fertiliser type. In this study, the use of wood ash, as well as digestate, affected the elemental content in hybrid aspen to a greater extent than the use of sewage sludge, relative to unfertilised (control) subplot. The analysed elements varied in the analysed stem plane (across the tree rings). The most significant changes between the rings were observed for the content of K and Ca

Immobilised humic substances as low-cost sorbents for emerging contaminants

Funding Information: Funding: This research was supported by the Latvian Council of Science, Fundamental and Applied Research Project No. lzp-2018/1-0009 “Properties and structure of peat humic substances and possibilities of their modification”. Publisher Copyright: © 2021 by the authors. Licensee MDPI, Basel, Switzerland.Environmental pollution with contaminants of emerging concern (CECs) is a worldwide problem that is receiving increasing attention. Although these substances have been released in the aquatic environment for a long time, wastewater treatment plants are still incapable of removing emerging contaminants completely. Consequently, trace metals, metalloids and pharmaceuticals, as well as surfactant leftovers, are often found in environmental samples. Environmentally friendly and cost-effective sorbents such as humic substances can be used for purification if their sorption properties are increased by immobilization. To our knowledge, immobilized humic substances have not been widely studied as sorbents up to now. In this study, humic substances were immobilized to obtain low-cost sorbents. The chosen methods for characterization of the obtained sorbents showed successful immobilization. Traditional pollutants, such as Cr(III) (a metal), As(V) (a metalloid) and chlorpromazine (a pharmaceutical), were used as representative contaminants. Sorption experiments were conducted using the batch system, and sorption was also studied based on the sorbent dosage, initial concentration of the studied element or substance, solution pH and sorption time. The results show that all the obtained immobilized humic substances in this study can be used as sorbents to remove contaminants from water. At the same time, from these humic substances, only those immobilized using iron compounds are suitable for the removal of arsenic.publishersversionPeer reviewe

A comparative study of the properties of industrially produced humic substances

Humic substances (HSs) are produced industrially in large quantities from low rank coal, weathered coal, peat, also from soils, composts and other sources. Considering that the applications of industrially produced HSs also include food, pharmaceutical applications and environmental technologies, it is important to evaluate their composition and quality and to identify their sources. The aim of the present study is to compare the properties of industrially produced HS samples. HSs were characterised using spectroscopic and other methods. For the identification of origin of HSs, different methods can be used, such as elemental analysis and ratios of light stable isotopes. The results of the study indicate that many industrially produced HSs are of poor quality (low concentration of basic substance, admixture of undesirable substances, pollutants, no quality indications). In this situation, rigorous quality control should be implemented, providing detailed characteristics of the product. The composition of materials suggested for agricultural applications has not been analysed much. Most of the studied materials were designated as HAs, followed by fulvic acids (FAs) and HSs. However, an analysis of the humic matter types indicates that the majority of substances offered on the market are in fact mixtures of HAs and FAs; so, it would be more appropriate to designate them as HSs or their salts. This study identifies the main quality problems of industrially produced humic substances: 1) lack of strict quality indicators, 2) absence of indication of source materials/origins of HSs

Impact of storage conditions on preparation of activated carbon from sheep wool fibres

Received: January 31st, 2023 ; Accepted: June 16th, 2023 ; Published: July 6th, 2023 ; Correspondence: [email protected] the European Union, up to 200 thousand tons (Zoccola et al., 2015) of sheep wool fibres, that are not used for textile fabrication, are a secondary by-product with wide field of application possibilities, including preparation of activated carbon. Taking into account, that wool fibres can be stored for long time, under impact of the local climate conditions (including low temperatures) before their application, for example, under variety of temperature, presence of air and light, different moisture conditions, it is necessary to estimate the impact of wool’s storage conditions on the preparation of activated carbon. In the present work, various parameters, such as, temperature, presence of air and daylight as well as humidity, were selected for comparison. After storage of wool fibres under selected various conditions, thermogravimetry/differential thermal analysis (TG/DTA) followed by with Fourier transform infrared (FTIR) spectrometry were used in order to estimate the impact of each parameter on the thermal decomposition processes: release of moisture, sulphur and nitrogen containing compounds and oxidative degradation followed by release of carbon dioxide. It was estimated, that one year of storage under varying conditions does not significantly affect the thermal decomposition properties of the wool fibres. However, minor impact of humidity absorbed from air on wool is observed. Wool samples that were stored at elevated humidity gave higher residual carbon yield (R) in comparison to the fibres stored in dry conditions. The obtained results are used to develop recommendations for preparation of activated carbon from wool fibres and for its application in air filtrating systems

Amino acid metabolism is significantly altered at the time of admission in hospital for severe COVID-19 patients: findings from longitudinal targeted metabolomics analysis

The heterogeneity in severity and outcome of COVID-19 cases points out the urgent need for early molecular characterization of patients followed by risk-stratified care. The main objective of this study was to evaluate the fluctuations of serum metabolomic profiles of COVID-19 patients with severe illness during the different disease stages in a longitudinal manner. We demonstrate a distinct metabolomic signature in serum samples of 32 hospitalized patients at the acute phase compared to the recovery period, suggesting the tryptophan (tryptophan, kynurenine, and 3-hydroxy-DL-kynurenine) and arginine (citrulline and ornithine) metabolism as contributing pathways in the immune response to SARS-CoV-2 with a potential link to the clinical severity of the disease. In addition, we suggest that glutamine deprivation may further result in inhibited M2 macrophage polarization as a complementary process, and highlight the contribution of phenylalanine and tyrosine in the molecular mechanisms underlying the severe course of the infection. In conclusion, our results provide several functional metabolic markers for disease progression and severe outcome with potential clinical application. IMPORTANCE Although the host defense mechanisms against SARS-CoV-2 infection are still poorly described, they are of central importance in shaping the course of the disease and the possible outcome. Metabolomic profiling may complement the lacking knowledge of the molecular mechanisms underlying clinical manifestations and pathogenesis of COVID-19. Moreover, early identification of metabolomics-based biomarker signatures is proved to serve as an effective approach for the prediction of disease outcome. Here we provide the list of metabolites describing the severe, acute phase of the infection and bring the evidence of crucial metabolic pathways linked to aggressive immune responses. Finally, we suggest metabolomic phenotyping as a promising method for developing personalized care strategies in COVID-19 patients.publishersversionPeer reviewe

Metformin targets intestinal immune system signaling pathways in a high-fat diet-induced mouse model of obesity and insulin resistance

IntroductionResearch findings of the past decade have highlighted the gut as the main site of action of the oral antihyperglycemic agent metformin despite its pharmacological role in the liver. Extensive evidence supports metformin’s modulatory effect on the composition and function of gut microbiota, nevertheless, the underlying mechanisms of the host responses remain elusive. Our study aimed to evaluate metformin-induced alterations in the intestinal transcriptome profiles at different metabolic states. MethodsThe high-fat diet-induced mouse model of obesity and insulin resistance of both sexes was developed in a randomized block experiment and bulk RNA-Seq of the ileum tissue was the method of choice for comparative transcriptional profiling after metformin intervention for ten weeks. ResultsWe found a prominent transcriptional effect of the diet itself with comparatively fewer genes responding to metformin intervention. The overrepresentation of immune-related genes was observed, including pronounced metformin-induced upregulation of immunoglobulin heavy-chain variable region coding Ighv1-7 gene in both high-fat diet and control diet-fed animals. Moreover, we provide evidence of the downregulation NF-kappa B signaling pathway in the small intestine of both obese and insulin-resistant animals as well as control animals after metformin treatment. Finally, our data pinpoint the gut microbiota as a crucial component in the metformin-mediated downregulation of NF-kappa B signaling evidenced by a positive correlation between the Rel and Rela gene expression levels and abundances of Parabacteroides distasonis, Bacteroides spp., and Lactobacillus spp. in the gut microbiota of the same animals. DiscussionOur study supports the immunomodulatory effect of metformin in the ileum of obese and insulin-resistant C57BL/6N mice contributed by intestinal immunoglobulin responses, with a prominent emphasis on the downregulation of NF-kappa B signaling pathway, associated with alterations in the composition of the gut microbiome

Tuberculosis in HIV-infected children in Europe, Thailand and Brazil: paediatric TB-HIV EuroCoord study

SETTING: Centres participating in the Paediatric European Network for Treatment of AIDS (PENTA), including Thailand and Brazil. OBJECTIVE: To describe the incidence, presentation, treatment and treatment outcomes of tuberculosis (TB) in human immunodeficiency virus (HIV) infected children. DESIGN: Observational study of TB diagnosed in HIV-infected children in 2011–2013. RESULTS: Of 4265 children aged <16 years, 127 (3%) were diagnosed with TB: 6 (5%) in Western Europe, 80 (63%) in Eastern Europe, 27 (21%) in Thailand and 14 (11%) in Brazil, with estimated TB incidence rates of respectively 239, 982, 1633 and 2551 per 100 000 person-years (py). The majority (94%) had acquired HIV perinatally. The median age at TB diagnosis was 6.8 years (interquartile range 3.0–11.5). Over half (52%) had advanced/severe World Health Organization stage immunodeficiency; 67 (53%) were not on antiretroviral therapy (ART) at TB diagnosis. Preventive anti-tuberculosis treatment was given to 23% (n = 23) of 102 children diagnosed with HIV before TB. Eleven children had unfavourable TB outcomes: 4 died, 5 did not complete treatment, 1 had recurrent TB and 1 had an unknown outcome. In univariable analysis, previous diagnosis of acquired immune-deficiency syndrome, not being virologically suppressed on ART at TB diagnosis and region (Brazil) were significantly associated with unfavourable TB outcomes. CONCLUSION: Most TB cases were from countries with high TB prevalence. The majority (91%) had favourable outcomes. Universal ART and TB prophylaxis may reduce missed opportunities for TB prevention

First Report on the Latvian SARS-CoV-2 Isolate Genetic Diversity

Copyright © 2021 Zrelovs, Ustinova, Silamikelis, Birzniece, Megnis, Rovite, Freimane, Silamikele, Ansone, Pjalkovskis, Fridmanis, Vilne, Priedite, Caica, Gavars, Perminov, Storozenko, Savicka, Dimina, Dumpis and Klovins.Remaining a major healthcare concern with nearly 29 million confirmed cases worldwide at the time of writing, novel severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has caused more than 920 thousand deaths since its outbreak in China, December 2019. First case of a person testing positive for SARS-CoV-2 infection within the territory of the Republic of Latvia was registered on 2nd of March 2020, 9 days prior to the pandemic declaration by WHO. Since then, more than 277,000 tests were carried out confirming a total of 1,464 cases of coronavirus disease 2019 (COVID-19) in the country as of 12th of September 2020. Rapidly reacting to the spread of the infection, an ongoing sequencing campaign was started mid-March in collaboration with the local testing laboratories, with an ultimate goal in sequencing as much local viral isolates as possible, resulting in first full-length SARS-CoV-2 isolate genome sequences from the Baltics region being made publicly available in early April. With 133 viral isolates representing ~9.1% of the total COVID-19 cases during the "first coronavirus wave" in the country (early March, 2020-mid-September, 2020) being completely sequenced as of today, here, we provide a first report on the genetic diversity of Latvian SARS-CoV-2 isolates.publishersversionPeer reviewe

Metformin strongly affects transcriptome of peripheral blood cells in healthy individuals

Funding Information: The study was supported by the European Regional Development Fund under the project ?Investigation of interplay between multiple determinants influencing response to metformin: search for reliable predictors for efficacy of type 2 diabetes therapy? (Project No.: 1.1.1.1/16/A/091, https://ec.europa.eu/regional_policy/en/funding/ erdf/). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. The authors would like to thank all the volunteers for their participation and acknowledge the Genome Database of the Latvian Population for providing biological material and data. Publisher Copyright: © 2019 Ustinova et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Metformin is a commonly used antihyperglycaemic agent for the treatment of type 2 diabetes mellitus. Nevertheless, the exact mechanisms of action, underlying the various therapeutic effects of metformin, remain elusive. The goal of this study was to evaluate the alterations in longitudinal whole-blood transcriptome profiles of healthy individuals after a one-week metformin intervention in order to identify the novel molecular targets and further prompt the discovery of predictive biomarkers of metformin response. Next generation sequencing-based transcriptome analysis revealed metformin-induced differential expression of genes involved in intestinal immune network for IgA production and cytokine-cytokine receptor interaction pathways. Significantly elevated faecal sIgA levels during administration of metformin, and its correlation with the expression of genes associated with immune response (CXCR4, HLA-DQA1, MAP3K14, TNFRSF21, CCL4, ACVR1B, PF4, EPOR, CXCL8) supports a novel hypothesis of strong association between metformin and intestinal immune system, and for the first time provide evidence for altered RNA expression as a contributing mechanism of metformin’s action. In addition to universal effects, 4 clusters of functionally related genes with a subject-specific differential expression were distinguished, including genes relevant to insulin production (HNF1B, HNF1A, HNF4A, GCK, INS, NEUROD1, PAX4, PDX1, ABCC8, KCNJ11) and cholesterol homeostasis (APOB, LDLR, PCSK9). This inter-individual variation of the metformin effect on the transcriptional regulation goes in line with well-known variability of the therapeutic response to the drug.publishersversionPeer reviewe