10 research outputs found
RCAsimulation
RCAsimulation.zip contains the simulation code (MATLAB) used in Kopps et al. 2015 and a manual on how to run the simulation
Allen_et_al_Microsat_Data
Microsatellite data (recoded). For original scores please contact Michael Krützen ([email protected]
Structure plots for humpback dolphins where k = 3 (A) and k = 4 (B), for snubfin dolphins (C), and the three regularly encountered dolphin species at Cygnet Bay (D). k = number of clusters.
<p>Each bar on the x-axis corresponds to an individual. The y-axis indicates the proportion of population/species membership. OH = snubfin dolphins, SC = humpback dolphins, CY = Cygnet Bay, DA = Dampier Archipelago, NWC = North West Cape, RB = Roebuck Bay, H = suspected hybrid, TA = bottlenose dolphin.</p
mtDNA networks for snubfin and humpback dolphins.
<p>Sample sizes are shown in parentheses. Branch numbers indicate the number of nucleotide differences between mtDNA haplotypes.</p
Biopsy sampling locations and sample sizes of Australian snubfin and Indo-Pacific humpback dolphins in north-western Australia.
<p>Biopsy sampling locations and sample sizes of Australian snubfin and Indo-Pacific humpback dolphins in north-western Australia.</p
Microsatellite characteristics for snubfin and humpback dolphins.
<p>N<sub>A</sub> = Number of Alleles, N<sub>E</sub> = Number of effective Alleles, F<sub>IS</sub> = Inbreeding Coefficient, H<sub>E</sub> = expected heterozygosity, H<sub>O</sub> = observed heterozygosity.</p><p>Numbers are averages over polymorphic loci. See Tables A1 and A2 for locus specific microsatellite characteristics.</p
Genetic differentiation of mtDNA and microsatellite loci.
<p>Asterisks indicate <i>P</i> values (*<i>P</i><0.05, **<i>P</i><0.001). CY = Cygnet Bay, RB = Roebuck Bay, DA = Dampier Archipelago, NWC = North West Cape. For the mtDNA based estimates a lower sample size was used for both species; 15 samples from RB, 23 samples from CY, and 13 samples each from DA and NWC.</p
Alleles shared by the suspected hybrid and the three resident dolphin species at Cygnet Bay.
<p>OH = snubfin dolphin, SC = humpback dolphin, TA = bottlenose dolphin, y = yes, n = no.</p