Direct detection of electron backscatter diffraction patterns.

We report the first use of direct detection for recording electron backscatter diffraction patterns. We demonstrate the following advantages of direct detection: the resolution in the patterns is such that higher order features are visible; patterns can be recorded at beam energies below those at which conventional detectors usefully operate; high precision in cross-correlation based pattern shift measurements needed for high resolution electron backscatter diffraction strain mapping can be obtained. We also show that the physics underlying direct detection is sufficiently well understood at low primary electron energies such that simulated patterns can be generated to verify our experimental data

Fast Entropy Estimation for Natural Sequences

It is well known that to estimate the Shannon entropy for symbolic sequences accurately requires a large number of samples. When some aspects of the data are known it is plausible to attempt to use this to more efficiently compute entropy. A number of methods having various assumptions have been proposed which can be used to calculate entropy for small sample sizes. In this paper, we examine this problem and propose a method for estimating the Shannon entropy for a set of ranked symbolic natural events. Using a modified Zipf-Mandelbrot-Li law and a new rank-based coincidence counting method, we propose an efficient algorithm which enables the entropy to be estimated with surprising accuracy using only a small number of samples. The algorithm is tested on some natural sequences and shown to yield accurate results with very small amounts of data

Co-morbidity burden in Parkinson’s disease : Comparison with controls and its influence on prognosis

Financial support This study was funded by Parkinson’s UK, the Scottish Chief Scientist Office, NHS Grampian endowments, the BMA Doris Hillier award, RS Macdonald Trust, the BUPA Foundation, and SPRING. The funders had no involvement in the study. Acknowledgements We acknowledge funding for the PINE study from Parkinson’s UK (G-0502, G-0914, G-1302), the Scottish Chief Scientist Office(CAF/12/05), the BMA Doris Hillier award, RS Macdonald Trust, the BUPA Foundation, NHS Grampian endowments and SPRING. We thank the patients and controls for their participation and the research staff who collected data and supported the study database.Peer reviewedPostprintPostprintPublisher PD

Seismic structure and earthquake focal mechanisms of the Hengill volcanic complex, S W Iceland

Iceland provides a unique opportunity to study the processes that occur along mid- ocean ridges. In 1991, thirty temporary seismic stations were installed at the Hengill volcanic complex to record high-quality digital data from local earthquakes. From these data 449 earthquakes have been located, most of them beneath the geothermal area. A local earthquake tomographic inversion was carried out to determine the three- dimensional V(_p) and V(_p) /V(_s) structure to 6 km depth, using P-wave travel times and S-P times from local earthquakes recorded in 1981 and 1991. The resulting models are smoothly varying and give a low data variance. The V(_p) model is similar to that of a previous tomographic inversion in the area, although the models differ in detail. The main high-V(_p) features of these models are interpreted as solidified intrusions, and underlie extinct volcanic centres. A low V(_p) /V(_s) body (-4%) is detected from 0 to 3 km depth that correlates with the surface expression of the geothermal field and is probably due to a combination of effects that include a slightly lower pore fluid pressure (and thus a higher steam content), and rock matrix alteration. Well-constrained moment tensors were determined for 70 local earthquakes by inverting the polarities and amplitude ratios of P and S arrivals. This method works well and is relatively insensitive to wave-speed model and attenuation variations. Most of the earthquakes are non-double-couple with explosive volumetric components. Only 17 (28%) of the earthquakes are consistent with a double-couple model. The remaining earthquakes are modelled as a combination of an opening tensile crack and a shear fault. Two geometries are considered: (1) rupture on two separate fault planes aligned at 45º, and (2) opening-shear rupture on a single fault plane, which is equivalent to coplanar tensile and shear faults. Both models can give the same moment tensors, and the data cannot distinguish between them. They give a good fit to the data, with few polarity misfits for most of the earthquakes. Right-lateral opening-shear strike-slip faulting on near-vertical planes is consistent with the regional seismicity of the South Iceland Seismic Zone. The non-double-couple earthquakes may result from the regional stress regime interacting with the geothermal field

Natural Enemies of Cranberry Fruitworm, \u3ci\u3eAcrobasis Vaccinii\u3c/i\u3e, (Lepidoptera: Pyraudae) in Michigan Highbush Blueberries

A two-year study was conducted in Michigan highbush blueberries to determine the complex of parasitoids attacking cranberry fruitworm, Acrobasis vaccinii. Eight parasitoid species and one fungal pathogen were collected. Parasitism of collected hosts ranged from 6.6% to 28.1%. The more common larval parasitoid encountered was Campoletis patsuiketorum (Hymenoptera: Ichneumonidae). The more common parasitoid recovered from fruitworm hibernacula was Villa lateralis (Diptera: Bombyliidae). This study documented six unreported natural enemies of cranberry fruitworm, including C. patsuiketorum; V. lateralis; Diadegma compressum (Hymenoptera: Ichneumonidae); Compsilura concinnata (Diptera: Tachinidae); Memorilla pyste (Diptera: Tachinidae); an undescribed Microtypus species (Hymenoptera: Braconidae); and a fungal pathogen, Paecilomyces near farinosus. This is the first known host association for the undescribed Microtypus species, and increases the known parasitoid complex of cranberry fruitworm to 17 species

Path integral evaluation of equilibrium isotope effects

A general and rigorous methodology to compute the quantum equilibrium isotope effect is described. Unlike standard approaches, ours does not assume separability of rotational and vibrational motions and does not make the harmonic approximation for vibrations or rigid rotor approximation for the rotations. In particular, zero point energy and anharmonicity effects are described correctly quantum mechanically. The approach is based on the thermodynamic integration with respect to the mass of isotopes and on the Feynman path integral representation of the partition function. An efficient estimator for the derivative of free energy is used whose statistical error is independent of the number of imaginary time slices in the path integral, speeding up calculations by a factor of 60 at 500 K. We describe the implementation of the methodology in the molecular dynamics package Amber 10. The method is tested on three [1,5] sigmatropic hydrogen shift reactions. Because of the computational expense, we use ab initio potentials to evaluate the equilibrium isotope effects within the harmonic approximation, and then the path integral method together with semiempirical potentials to evaluate the anharmonicity corrections. Our calculations show that the anharmonicity effects amount up to 30% of the symmetry reduced reaction free energy. The numerical results are compared with recent experiments of Doering and coworkers, confirming the accuracy of the most recent measurement on 2,4,6,7,9-pentamethyl-5-(5,5-$^2$H$_2$)methylene-11,11a-dihydro-12H-naphthacene as well as concerns about compromised accuracy, due to side reactions, of another measurement on 2-methyl-10-(10,10-$^2$H$_2$)methylenebicyclo[4.4.0]dec-1-ene.Comment: 14 pages, 8 figures, 6 table

General patterns of tag usage among university groups in Flickr

Purpose - The purpose of this research is to investigate general patterns of tag usage and determines the usefulness of the tags used within university image groups to the wider Flickr community. There has been a significant rise in the use of Web 2.0 social network web sites and online applications in recent years. One of the most popular is Flickr, an online image management application. Design/methodology/approach - This study uses a webometric data collection, classification and informetric analysis. Findings - The results show that members of university image groups tend to tag in a manner that is of use to users of the system as a whole rather than merely for the tag creator. Originality/value - This paper gives a valuable insight into the tagging practices of image groups in Flickr.Published versio