6,339 research outputs found

    Nse2, a component of the Smc5-6 complex, is a SUMO ligase required for the response to DNA damage

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    The Schizosaccharomyces pombe SMC proteins Rad18 (Smc6) and Spr18 (Smc5) exist in a high-M(r) complex which also contains the non-SMC proteins Nse1, Nse2, Nse3, and Rad62. The Smc5-6 complex, which is essential for viability, is required for several aspects of DNA metabolism, including recombinational repair and maintenance of the DNA damage checkpoint. We have characterized Nse2 and show here that it is a SUMO ligase. Smc6 (Rad18) and Nse3, but not Smc5 (Spr18) or Nse1, are sumoylated in vitro in an Nse2-dependent manner, and Nse2 is itself autosumoylated, predominantly on the C-terminal part of the protein. Mutations of C195 and H197 in the Nse2 RING-finger-like motif abolish Nse2-dependent sumoylation. nse2.SA mutant cells, in which nse2.C195S-H197A is integrated as the sole copy of nse2, are viable, whereas the deletion of nse2 is lethal. Smc6 (Rad18) is sumoylated in vivo: the sumoylation level is increased upon exposure to DNA damage and is drastically reduced in the nse2.SA strain. Since nse2.SA cells are sensitive to DNA-damaging agents and to exposure to hydroxyurea, this implicates the Nse2-dependent sumoylation activity in DNA damage responses but not in the essential function of the Smc5-6 complex

    High power diode laser Master Oscillator-Power Amplifier (MOPA)

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    High power multiple quantum well AlGaAs diode laser master oscillator - power amplifier (MOPA) systems were examined both experimentally and theoretically. For two pass operation, it was found that powers in excess of 0.3 W per 100 micrometers of facet length were achievable while maintaining diffraction-limited beam quality. Internal electrical-to-optical conversion efficiencies as high as 25 percent were observed at an internal amplifier gain of 9 dB. Theoretical modeling of multiple quantum well amplifiers was done using appropriate rate equations and a heuristic model of the carrier density dependent gain. The model gave a qualitative agreement with the experimental results. In addition, the model allowed exploration of a wider design space for the amplifiers. The model predicted that internal electrical-to-optical conversion efficiencies in excess of 50 percent should be achievable with careful system design. The model predicted that no global optimum design exists, but gain, efficiency, and optical confinement (coupling efficiency) can be mutually adjusted to meet a specific system requirement. A three quantum well, low optical confinement amplifier was fabricated using molecular beam epitaxial growth. Coherent beam combining of two high power amplifiers injected from a common master oscillator was also examined. Coherent beam combining with an efficiency of 93 percent resulted in a single beam having diffraction-limited characteristics. This beam combining efficiency is a world record result for such a system. Interferometric observations of the output of the amplifier indicated that spatial mode matching was a significant factor in the less than perfect beam combining. Finally, the system issues of arrays of amplifiers in a coherent beam combining system were investigated. Based upon experimentally observed parameters coherent beam combining could result in a megawatt-scale coherent beam with a 10 percent electrical-to-optical conversion efficiency

    Analysis and use of VAS satellite data

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    A series of interrelated investigations has examined the analysis and use of VAS (VISSR Atmospheric Sounder) satellite data. A case study of VAS-derived mesoscale stability parameters suggested that they would have been a useful supplement to conventional data in the forecasting of thunderstorms on the day of interest. However, the meteorological significance of small or short lived stability features was uncertain. A second investigation examined the roles of first guess and VAS radiometric data in producing sounding retrievals. The radiance data often did not have a decisive influence on the final satellite soundings. Broad-scale patterns of the first guess, radiances, and retrievals frequently were similar, whereas small scale retrieval features, especially in the dew points, were often of uncertain origin

    Analysis and use of VAS satellite data

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    Four interrelated investigations have examined the analysis and use of VAS satellite data. A case study of VAS-derived mesoscale stability parameters suggested that they would have been a useful supplement to conventional data in the forecasting of thunderstorms on the day of interest. A second investigation examined the roles of first guess and VAS radiometric data in producing sounding retrievals. Broad-scale patterns of the first guess, radiances, and retrievals frequently were similar, whereas small-scale retrieval features, especially in the dew points, were often of uncertain origin. Two research tasks considered 6.7 micron middle tropospheric water vapor imagery. The first utilized radiosonde data to examine causes for two areas of warm brightness temperature. Subsidence associated with a translating jet streak was important. The second task involving water vapor imagery investigated simulated imagery created from LAMPS output and a radiative transfer algorithm. Simulated image patterns were found to compare favorably with those actually observed by VAS. Furthermore, the mass/momentum fields from LAMPS were powerful tools for understanding causes for the image configurations

    Contrasting abundance and residency patterns of two sympatric populations of transient killer whales (Orcinus orca) in the northern Gulf of Alaska

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    Two sympatric populations of “transient” (mammal-eating) killer whales were photo-identified over 27 years (1984–2010) in Prince William Sound and Kenai Fjords, coastal waters of the northern Gulf of Alaska (GOA). A total of 88 individuals were identified during 203 encounters with “AT1” transients (22 individuals) and 91 encounters with “GOA” transients (66 individuals). The median number of individuals identified annually was similar for both populations (AT1=7; GOA=8), but mark-recapture estimates showed the AT1 whales to have much higher fidelity to the study area, whereas the GOA whales had a higher exchange of individuals. Apparent survival estimates were generally high for both populations, but there was a significant reduction in the survival of AT1 transients after the Exxon Valdez oil spill in 1989, with an abrupt decline in estimated abundance from a high of 22 in 1989 to a low of seven whales at the end of 2010. There was no detectable decline in GOA population abundance or survival over the same period, but abundance ranged from just 6 to 18 whales annually. Resighting data from adjacent coastal waters and movement tracks from satellite tags further indicated that the GOA whales are part of a larger population with a more extensive range, whereas AT1 whales are resident to the study area

    11-12 Gyr Old White Dwarfs 30 Pc Away

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    We present a detailed model atmosphere analysis of two of the oldest stars known in the solar neighbourhood, the high proper motion white dwarfs SDSS J110217.48+411315.4 (hereafter J1102) and WD 0346+246 (hereafter WD0346). We present trigonometric parallax observations of J1102, which places it at a distance of only 33.7 ± 2.0 pc. Based on the state-of-the-art model atmospheres, optical, near-infrared, mid-infrared photometry and distances, we constrain the temperatures, atmospheric compositions, masses and ages for both stars. J1102 is an 11-Gyr-old (white dwarf plus main-sequence age), 0.62 M⊙ white dwarf with a pure H atmosphere and Teff= 3830 K. WD0346 is an 11.5-Gyr-old, 0.77 M⊙ white dwarf with a mixed H/He atmosphere and Teff= 3650 K. Both stars display halo kinematics and their ages agree remarkably well with the ages of the nearest globular clusters, M4 and NGC 6397. J1102 and WD0346 are the closest examples of the oldest halo stars that we know of

    Modelling the hepatitis B vaccination programme in prisons

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    A vaccination programme offering hepatitis B (HBV) vaccine at reception into prison has been introduced into selected prisons in England and Wales. Over the coming years it is anticipated this vaccination programme will be extended. A model has been developed to assess the potential impact of the programme on the vaccination coverage of prisoners, ex-prisoners, and injecting drug users (IDUs). Under a range of coverage scenarios, the model predicts the change over time in the vaccination status of new entrants to prison, current prisoners and IDUs in the community. The model predicts that at baseline in 2012 57% of the IDU population will be vaccinated with up to 72% being vaccinated depending on the vaccination scenario implemented. These results are sensitive to the size of the IDU population in England and Wales and the average time served by an IDU during each prison visit. IDUs that do not receive HBV vaccine in the community are at increased risk from HBV infection. The HBV vaccination programme in prisons is an effective way of vaccinating this hard-to-reach population although vaccination coverage on prison reception must be increased to achieve this

    Protoplanetary Disk Masses in the Young NGC 2024 Cluster

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    We present the results from a Submillimeter Array survey of the 887 micron continuum emission from the protoplanetary disks around 95 young stars in the young cluster NGC 2024. Emission was detected from 22 infrared sources, with flux densities from ~5 to 330 mJy; upper limits (at 3sigma) for the other 73 sources range from 3 to 24 mJy. For standard assumptions, the corresponding disk masses range from ~0.003 to 0.2Msolar, with upper limits at 0.002--0.01Msolar. The NGC 2024 sample has a slightly more populated tail at the high end of its disk mass distribution compared to other clusters, but without more information on the nature of the sample hosts it remains unclear if this difference is statistically significant or a superficial selection effect. Unlike in the Orion Trapezium, there is no evidence for a disk mass dependence on the (projected) separation from the massive star IRS2b in the NGC 2024 cluster. We suggest that this is due to either the cluster youth or a comparatively weaker photoionizing radiation field.Comment: ApJ, in pres
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