Additional file 4: Figure S2. of Common position of indels that cause deviations from canonical genome organization in different measles virus strains

Variability fingerprint constructed using 54 different complete measles genomic sequences. Legend: The variability of each genomic position is quantified by considering the number of different nucleotides that are found at that position (shown in white, light grey, dark grey or black). The rectangle indicates which fingerprint area depicts variability of non-coding region between M and F genes’ open reading frames (1012 nts). (TIF 501 kb

[Carpesium sp.]

原著和名: [記載なし]科名: キク科 = Compositae採集地: 栃木県 日光市 東照宮裏〜雲竜入口 (下野 日光 東照宮裏〜雲竜入口)採集日: 1980/10/10採集者: 萩庭丈壽整理番号: JH027469国立科学博物館整理番号: TNS-VS-977469備考: DB作成協力会による補足あ

Additional file 1: of Variability analysis and inter-genotype comparison of human respiratory syncytial virus small hydrophobic gene

Figure S1. Phylogenetic tree of RSV strains based on HVR2 genomic segment. Tree was generated using maximum-likelihood method, based on the General Time Reversible model and discrete gamma distributed rates across sites. The scale bar indicates the proportion of nucleotide substitutions per site. Numbers are percentages of bootstrap values determined for 1000 iterations, only values above 70% are shown. Strain designations are composed of NCBI GenBank acc. no., name and genotype. (PDF 54 kb

Additional file 2: of Variability analysis and inter-genotype comparison of human respiratory syncytial virus small hydrophobic gene

Table S1. Sequences identical at HVR2 or SHseg. (PDF 82 kb