Dynamics of doublon-holon pairs in Hubbard two-leg ladders

The dynamics of holon-doublon pairs is studied in Hubbard two-leg ladders using the time-dependent Density Matrix Renormalization Group method. We find that the geometry of the two-leg ladder, that is qualitatively different from a one-dimensional chain due to the presence of a spin-gap, strongly affects the propagation of a doublon-holon pair. Two distinct regimes are identified. For weak inter-leg coupling, the results are qualitatively similar to the case of the propagation previously reported in Hubbard chains, with only a renormalization of parameters. More interesting is the case of strong inter-leg coupling where substantial differences arise, particularly regarding the double occupancy and properties of the excitations such as the doublon speed. Our results suggest a connection between the presence of a spin gap and qualitative changes in the doublon speed, indicating a weak coupling between the doublon to magnetic excitations.Comment: 8 pages, 9 figures. Published versio

Neutrino interactions with nuclei

We present a model for neutrino-nucleus scattering in the energy region relevant for present and forthcoming neutrino-oscillation experiments. The model is based on the RPA treatment of the nuclear responses in the quasi-elastic and Delta-resonance region. It includes also in a phenomenological way nucleon knock-out. It aims at the description, within a single framework, of several final state channels i.e. quasi-elastic, incoherent and coherent one-pion production and two- or several-nucleon knock-out.Comment: To appear in the proceedings of 6th International Workshop on Neutrino-Nucleus Interactions in the Few-GeV Region (NuInt09), Sitges, Spain, 18 - 22 May 200

Design of a large scale flow-meter test and calibration facility

The design and set up of a large-scale flowmeter calibration and test facility is presented. The facility was designed to handle flowmeters with diameters between 6” and 14”, flow rates up to 0.3 m3/s and to give results less than 1% accurate. The calibration methodology consisted firstly in calibrating the pattern flowmeters, using volume and time primary measurements, and secondly, comparing the pattern to the flowmeters needing calibration. The design and calculation of the primary calibration device is addressed, including numerical simulations of the outflow manifold and the comparison to experimental data. The calibration facility proved to be accurate and reliable in producing renewed calibration data for various tested flowmeter

Design of the distribution manifold for a large-scale flowmeter calibration facility

The design and test of the distribution manifold for a large-scale flowmeter calibration facility is presented. The design was intended to have an air-free flow operation and a free-surface flow-like towards the downstream half-body discharge. Back of the envelope calculations are presented for the estimation of the preliminary dimensions. Numerical simulations of the flow during manifold steady state operation are utilized to refine the manifold design. No air entrapment is noticed in the flow simulatio

Design of a large scale flow-meter test and calibration facility

The design and set up of a large-scale flowmeter calibration and test facility is presented. The facility was designed to handle flowmeters with diameters between 6” and 14”, flow rates up to 0.3 m3/s and to give results less than 1% accurate. The calibration methodology consisted firstly in calibrating the pattern flowmeters, using volume and time primary measurements, and secondly, comparing the pattern to the flowmeters needing calibration. The design and calculation of the primary calibration device is addressed, including numerical simulations of the outflow manifold and the comparison to experimental data. The calibration facility proved to be accurate and reliable in producing renewed calibration data for various tested flowmeter

Coherent Radiation from Extensive Air Showers in the Ultra-High Frequency Band

Using detailed Monte Carlo simulations we have characterized the features of the radio emission of inclined air showers in the Ultra-High Frequency band (300 MHz - 3 GHz). The Fourier-spectrum of the radiation is shown to have a sizable intensity well into the GHz frequency range. The emission is mainly due to transverse currents induced by the geomagnetic field and to the excess charge produced by the Askaryan effect. At these frequencies only a significantly reduced volume of the shower around the axis contributes coherently to the signal observed on the ground. The size of the coherently emitting volume depends on frequency, shower geometry and observer position, and is interpreted in terms of the relative time delays. At ground level, the maximum emission at high frequencies is concentrated in an elliptical ring-like region around the intersection of a Cherenkov cone with its vertex at shower maximum and the ground. The frequency spectrum of inclined showers when observed at positions that view shower maximum in the Cherenkov direction, is shown to be in broad agreement with the pulses detected by the Antarctic Impulsive Transient Antenna (ANITA) experiment, making the interpretation that they are due to Ultra-High Energy Cosmic Ray atmospheric showers consistent with our simulations. These results are also of great importance for experiments aiming to detect molecular bremsstrahlung radiation in the GHz range as they present an important background for its detection.Comment: 8 pages, 8 figure

Synergistic effects of tethered growth factors and adhesion ligands on DNA synthesis and function of primary hepatocytes cultured on soft synthetic hydrogels

The composition, presentation, and spatial orientation of extracellular matrix molecules and growth factors are key regulators of cell behavior. Here, we used self-assembling peptide nanofiber gels as a modular scaffold to investigate how fibronectin-derived adhesion ligands and different modes of epidermal growth factor (EGF) presentation synergistically regulate multiple facets of primary rat hepatocyte behavior in the context of a soft gel. In the presence of soluble EGF, inclusion of dimeric RGD and the heparin binding domain from fibronectin (HB) increased hepatocyte aggregation, spreading, and metabolic function compared to unmodified gels or gels modified with a single motif, but unlike rigid substrates, gels failed to induce DNA synthesis. Tethered EGF dramatically stimulated cell aggregation and spreading under all adhesive ligand conditions and also preserved metabolic function. Surprisingly, tethered EGF elicited DNA synthesis on gels with RGD and HB. Phenotypic differences between soluble and tethered EGF stimulation of cells on peptide gels are correlated with differences in expression and phosphorylation the EGF receptor and its heterodimerization partner ErbB2, and activation of the downstream signaling node ERK1/2. These modular matrices reveal new facets of hepatocellular biology in culture and may be more broadly useful in culture of other soft tissues.United States. ArmyHertz Foundation (Graduate Fellowship)National Institute for Biomedical Imaging and Bioengineering (U.S.) (R01EB003805)National Institute of Dental and Craniofacial Research (U.S.) (R01DE019523)Massachusetts Institute of Technology. Center for Environmental Health Sciences (National Institute of Environmental Health Sciences P30ES002109)Massachusetts Institute of Technology. Center for Environmental Health Sciences (National Institute of Environmental Health Sciences R01ES015241)Armed Forces Institute of Regenerative Medicin

The Shared Proteome of the Apomictic Fern Dryopteris affinis ssp. affinis and Its Sexual Relative Dryopteris oreades

Ferns are a diverse evolutionary lineage, sister to the seed plants, which is of great ecological importance and has a high biotechnological potential. Fern gametophytes represent one of the simplest autotrophic, multicellular plant forms and show several experimental advantages, including a simple and space-efficient in vitro culture system. However, the molecular basis of fern growth and development has hardly been studied. Here, we report on a proteomic study that identified 417 proteins shared by gametophytes of the apogamous fern Dryopteris affinis ssp. affinis and its sexual relative Dryopteris oreades. Most proteins are predicted to localize to the cytoplasm, the chloroplast, or the nucleus, and are linked to enzymatic, binding, and structural activities. A subset of 145 proteins are involved in growth, reproduction, phytohormone signaling and biosynthesis, and gene expression, including homologs of SHEPHERD (SHD), HEAT SHOCK PROTEIN 90-5 (CR88), TRP4, BOBBER 1 (BOB1), FLAVONE 3’-O-METHYLTRANSFERASE 1 (OMT1), ZEAXANTHIN EPOXIDASE (ABA1), GLUTAMATE DESCARBOXYLASE 1 (GAD), and dsRNA-BINDING DOMAIN-LIKE SUPERFAMILY PROTEIN (HLY1). Nearly 25% of the annotated proteins are associated with responses to biotic and abiotic stimuli. As for biotic stress, the proteins PROTEIN SGT1 HOMOLOG B (SGT1B), SUPPRESSOR OF SA INSENSITIVE2 (SSI2), PHOSPHOLIPASE D ALPHA 1 (PLDALPHA1), SERINE/THREONINE-PROTEIN KINASE SRK2E (OST1), ACYL CARRIER PROTEIN 4 (ACP4), and NONHOST RESISTANCE TO P. S. PHASEOLICOLA1 (GLPK) are worth mentioning. Regarding abiotic stimuli, we found proteins associated with oxidative stress: SUPEROXIDE DISMUTASE[CU-ZN] 1 (CSD1), and GLUTATHIONE S-TRANSFERASE U19 (GSTU19), light intensity SERINE HYDROXYMETHYLTRANSFERASE 1 (SHM1) and UBIQUITIN-CONJUGATING ENZYME E2 35 (UBC35), salt and heavy metal stress included MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 3 (PHT3;1), as well as drought and thermotolerance: LEA7, DEAD-BOX ATP-DEPENDENT RNA HELICASE 38 (LOS4), and abundant heat-shock proteins and other chaperones. In addition, we identified interactomes using the STRING platform, revealing protein–protein associations obtained from co-expression, co-occurrence, text mining, homology, databases, and experimental datasets. By focusing on ferns, this proteomic study increases our knowledge on plant development and evolution, and may inspire future applications in crop species

Proteome and Interactome Linked to Metabolism, Genetic Information Processing, and Abiotic Stress in Gametophytes of Two Woodferns

Ferns and lycophytes have received scant molecular attention in comparison to angiosperms. The advent of high-throughput technologies allowed an advance towards a greater knowledge of their elusive genomes. In this work, proteomic analyses of heart-shaped gametophytes of two ferns were performed: the apomictic Dryopteris affinis ssp. affinis and its sexual relative Dryopteris oreades. In total, a set of 218 proteins shared by these two gametophytes were analyzed using the STRING database, and their proteome associated with metabolism, genetic information processing, and responses to abiotic stress is discussed. Specifically, we report proteins involved in the metabolism of carbohydrates, lipids, and nucleotides, the biosynthesis of amino acids and secondary compounds, energy, oxide-reduction, transcription, translation, protein folding, sorting and degradation, and responses to abiotic stresses. The interactome of this set of proteins represents a total network composed of 218 nodes and 1792 interactions, obtained mostly from databases and text mining. The interactions among the identified proteins of the ferns D. affinis and D. oreades, together with the description of their biological functions, might contribute to a better understanding of the function and development of ferns as well as fill knowledge gaps in plant evolution