Catalytically active peptide–gold nanoparticle conjugates: Prospecting for artificial enzymes

The self‐assembly of peptides onto the surface of gold nanoparticles has emerged as a promising strategy towards the creation of artificial enzymes. The resulting high local peptide density surrounding the nanoparticle leads to cooperative and synergistic effects, which result in rate accelerations and distinct catalytic properties compared to the unconjugated peptide. This Minireview summarizes contributions to and progress made in the field of catalytically active peptide–gold nanoparticle conjugates. The origin of distinct properties, as well as potential applications, are also discussed

Response and Resistance to Paradox-Breaking BRAF Inhibitor in Melanomas

FDA-approved BRAF inhibitors produce high response rates and improve overall survival in patients with BRAF V600E/K-mutant melanoma, but are linked to pathologies associated with paradoxical ERK1/2 activation in wild-type BRAF cells. To overcome this limitation, a next-generation paradox-breaking RAF inhibitor (PLX8394) has been designed. Here, we show that by using a quantitative reporter assay, PLX8394 rapidly suppressed ERK1/2 reporter activity and growth of mutant BRAF melanoma xenografts. Ex vivo treatment of xenografts and use of a patient-derived explant system (PDeX) revealed that PLX8394 suppressed ERK1/2 signaling and elicited apoptosis more effectively than the FDA-approved BRAF inhibitor, vemurafenib. Furthermore, PLX8394 was efficacious against vemurafenibresistant BRAF splice variant-expressing tumors and reduced splice variant homodimerization. Importantly, PLX8394 did not induce paradoxical activation of ERK1/2 in wild-type BRAF cell lines or PDeX. Continued in vivo dosing of xenografts with PLX8394 led to the development of acquired resistance via ERK1/2 reactivation through heterogeneous mechanisms; however, resistant cells were found to have differential sensitivity to ERK1/2 inhibitor. These findings highlight the efficacy of a paradox-breaking selective BRAF inhibitor and the use of PDeX system to test the efficacy of therapeutic agents. © 2017 American Association for Cancer Research

Studying Underlying Characteristics of Computing and Engineering Student Success (SUCCESS) Survey

This survey was developed to measure underlying factors that may influence student success including personality, community, grit, thriving, identity, mindset, motivation, perceptions of faculty caring, stress, gratitude, self-control, mindfulness, and belongingness. We measure these underlying factors because each engineering and computing student admitted to a university has clear potential for academic and personal success in their undergraduate curriculum based upon admissions criteria. However, while some thrive academically, others struggle in a variety of ways. In our NSF-funded project (1626287/1626185/1626148), we posit that some collection of characteristics—apparently not visible on their admission applications and perhaps not related to their talent or intelligence—is an important piece of the student performance puzzle. We developed a survey to measure various non-cognitive and affective factors that we believe are important for student achievement, academically, personally, and professionally. These non-cognitive and affective factors are representative of multifaceted aspects of undergraduate student success in prior literature. Each of the constructs we chose had validity evidence from prior studies, some within an engineering population. An exploratory and confirmatory factor analysis have been conducted on the original list of items to develop this finalized survey (Scheidt et al., 2018). The survey takes approximately 30 minutes for students to complete. Scheidt, M., & Godwin, A., & Senkpeil, R. R., & Ge, J. S., & Chen, J., & Self, B. P., & Widmann, J. M., & Berger, E. J. (2018, June), Validity Evidence for the SUCCESS Survey: Measuring Non-Cognitive and Affective Traits of Engineering and Computing Students. Paper presented at 2018 ASEE Annual Conference & Exposition, Salt Lake City, Utah. https://peer.asee.org/3122

Testing maximal electron and muon neutrino oscillations with sub-GeV SuperKamiokande atmospheric neutrino data

Motivated by the Exact Parity Model and other theories, the hypothesis that each of the known neutrinos oscillates maximally with a sterile partner has been put forward as an explanation of the atmospheric and solar neutrino anomalies. We provide detailed predictions for muon and electron flux ratios induced in the Kamiokande and SuperKamiokande detectors by sub-GeV atmospheric neutrinos. Several different, carefully chosen cuts on momentum and zenith angle are proposed, emphasizing the role of up-down flux asymmetries.Comment: LaTeX, 8 figures, 17 pages, version to appear in Phys. Rev. D Rapid Communication

Comparison of 3-Dimensional and 1-Dimensional Schemes in the calculation of Atmospheric Neutrinos

A 3-dimensional calculation of atmospheric neutrinos flux is presented, and the results are compared with those of a 1-dimensional one. In this study, interaction and propagation of particles is treated in a 3-dimensional way including the curvature of charged particles due to the geomagnetic field, which is assumed to be a dipole field. The purpose of this paper is limited to the comparison of calculation schemes. The updated flux value with new interaction model and primary flux model will be reported in a separate paper. Except for nearly horizontal directions, the flux is very similar to the result of 1 dimensional calculations. However, for near-horizontal directions an enhancement of the neutrino flux is seen even at energies as high as 1 GeV. The production height of neutrinos is lower than the prediction by 1-dimensional calculation for near-horizontal directions, and is a little higher for near-vertical directions. However, the difference is not evident except for near-horizontal directions.Comment: 22 pages, 15figure

A single nucleotide substitution in TaHKT1;5-D controls shoot Na+ accumulation in bread wheat

Improving salinity tolerance in the most widely cultivated cereal, bread wheat (Triticum aestivum L.), is essential to increase grain yields on saline agricultural lands. A Portuguese landrace, Mocho de Espiga Branca accumulates up to sixfold greater leaf and sheath sodium (Na+) than two Australian cultivars, Gladius and Scout, under salt stress in hydroponics. Despite high leaf and sheath Na+ concentrations, Mocho de Espiga Branca maintained similar salinity tolerance compared to Gladius and Scout. A naturally occurring single nucleotide substitution was identified in the gene encoding a major Na+ transporter TaHKT1;5-D in Mocho de Espiga Branca, which resulted in a L190P amino acid residue variation. This variant prevents Mocho de Espiga Branca from retrieving Na+ from the root xylem leading to a high shoot Na+ concentration. The identification of the tissue-tolerant Mocho de Espiga Branca will accelerate the development of more elite salt-tolerant bread wheat cultivars

Comparing and contrasting the νμ→ντ\nu_{\mu} \to \nu_{\tau} and νμ→νs\nu_{\mu} \to \nu_s solutions to the atmospheric neutrino problem with SuperKamiokande data

The $\nu_{\mu} \to \nu_{\tau}$ and $\nu_{\mu} \to \nu_s$ solutions to the atmospheric neutrino problem are compared with SuperKamiokande data. The differences between these solutions due to matter effects in the Earth are calculated for the ratio of $\mu$-like to $e$-like events and for up-down flux asymmetries. These quantities are chosen because they are relatively insensitive to theoretical uncertainties in the overall neutrino flux normalisation and detection cross-sections and efficiencies. A $\chi^2$ analysis using these quantities is performed yielding $3\sigma$ ranges which are approximately given by $(0.725 - 1.0, 4 \times 10^{-4} - 2 \times 10^{-2} eV^2)$ and $(0.74 - 1.0, 1 \times 10^{-3} - 2 \times 10^{-2} eV^2)$ for $(\sin^2 2\theta,\Delta m^2)$ for the $\nu_{\mu} \to \nu_{\tau}$ and $\nu_{\mu} \to \nu_s$ solutions, respectively. Values of $\Delta m^2$ smaller than about $2 \times 10^{-3}$ eV$^2$ are disfavoured for the $\nu_{\mu} \to \nu_s$ solution, suggesting that future long baseline experiments should see a positive signal if this scenario is the correct one.Comment: revtex, 22 pages, 12 figure

Solutions of the atmospheric, solar and LSND neutrino anomalies from TeV scale quark-lepton unification

There is a unique $SU(4) \otimes SU(2)_L \otimes SU(2)_R$ gauge model which allows quarks and leptons to be unified at the TeV scale. It is already known that the neutrino masses arise radiatively in the model and are naturally light. We study the atmospheric, solar and LSND neutrino anomalies within the framework of this model.Comment: Minor changes, 31 page

Are Messages of R-parity Violating Supersymmetry Hidden within Top Quark Signals ?

In an R-parity nonconserving supersymmetric theory, the lighter stop can dominantly decay into $b\mu$ and $b\tau$ if R-parity breaking has to explain the neutrino mass and mixing pattern suggested by the data on atmospheric muon neutrinos. This should give rise to $dilepton+dijet$ and $single-lepton+jets$, signals resembling those of the top quark at the Fermilab Tevatron. One can thus constrain the stop parameter space using the current top search data, and similarly look for the first signals of supersymmetry at the upgraded runs of the Tevatron.Comment: 13 pages, RevTeX, 2 PS figures, uses epsfig.sty, few comments and references added, version to appear in Phys. Rev. Let