Pierre Loti'nin yüzüncü doğum yıldönümü

Taha Toros Arşivi, Dosya Adı: Pierre Lotiİstanbul Kalkınma Ajansı (TR10/14/YEN/0033) İstanbul Development Agency (TR10/14/YEN/0033

BEAST divergence time estimation of <i>M</i>. <i>petechialis</i> using calibrated molecular clocks method.

<p>Divergence rates: A, 1%/Myr; B, 2%/Myr. Node ages were represented near the branches. Blue bars on branch nodes indicate 95% Highest Posterior Density age intervals. Timescales in million years before present (Ma).</p

Phylogenetic hypothesis based on COI sequences represented by Bayesian inference method.

<p>Bootstrap values were represented near the branches (BI and NJ bootstrap values, respectively).</p

Number of individuals sampled per site (N, parentheses: total number of sequences included), number of haplotype (n), haplotype diversity (h), nucleotide diversity (π), and mean number of pairwise differences (k) were shown for each population.

<p>Subscripts indicate variables for COI or ITS-1. Abbr, site abbreviation.</p

Pairwise Φ_ST values based on COI (below diagonal) and associated <i>P</i> values (below diagonal) after Bonferroni correction between populations within South lineage.

<p>Significant <i>P</i> values (<i>P</i> < 0.05) after 10,000 permutation are bolded.</p

Network of <i>M</i>. <i>petechialis</i> using COI data.

<p>The pie charts refer to the haplotypes. B&YS: Bohai and Yellow Sea; ECS: East China Sea; SCS: South China Sea.</p

Estimates of neutral tests for population expansion and the mismatch distribution parameters RI and SSD of each lineage.

<p>Significant <i>P</i> values for Fu’ Fs and Tajima's D (<i>P</i> <0.05) and nonsignificant values for RI and SSD (<i>P</i> >0.05) are bolded.</p

Pairwise Φ_ST values based on COI (below diagonal) and associated P values (below diagonal) after Bonferroni correction between populations within North lineage.

<p>Significant P values (P < 0.05) after 10,000 permutation are bolded.</p

Map showing sample locations, spatial distribution of the two mitochondrial clades by pie diagrams for <i>M</i>. <i>petechialis</i> and the coastal currents in summer.

<p>Sampling sites are labelled with numbers in <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0183221#pone.0183221.t001" target="_blank">Table 1</a>. Two lineages are color-coded separately: Red, North lineage; Yellow, South lineage. CCC, China Coastal Current; WKCC, West Korea Coastal Current; SCC, Subei Coastal Current. This map is rendered with ODV v4.7.6 [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0183221#pone.0183221.ref035" target="_blank">35</a>].</p

Relationship between genetic vs. geographical distance (log-transformed) in <i>M</i>. <i>petechialis</i>.

<p>A, all China populations except Wenzhou; B, the North populations; C, the South populations.</p