Identification of QTNs, QTN-by-environment interactions for plant height and ear height in maize multi-environment GWAS

Plant height (PH) and ear height (EH) are important traits associated with biomass, lodging resistance, and grain yield in maize. There were strong effects of genotype x environment interaction (GEI) on plant height and ear height of maize. In this study, 203 maize inbred lines were grown at five locations across China’s Spring and Summer corn belts, and plant height (PH) and ear height (EH) phenotype data were collected and grouped using GGE biplot. Five locations fell into two distinct groups (or mega environments) that coincide with two corn ecological zones called Summer Corn Belt and Spring Corn Belt. In total, 73,174 SNPs collected using GBS sequencing platform were used as genotype data and a recently released multi-environment GWAS software package IIIVmrMLM was employed to identify QTNs and QTN x environment (corn belt) interaction (QEIs); 12 and 11 statistically significant QEIs for PH and EH were detected respectively and their phenotypic effects were further partitioned into Add*E and Dom*E components. There were 28 and 25 corn-belt-specific QTNs for PH and EH identified, respectively. The result shows that there are a large number of genetic loci underlying the PH and EH GEIs and IIIVmrMLM is a powerful tool in discovering QTNs that have significant QTN-by-Environment interaction. PH and EH candidate genes were annotated based on transcriptomic analysis and haplotype analysis. EH related-QEI S10_135 (Zm00001d025947, saur76, small auxin up RNA76) and PH related-QEI S4_4 (Zm00001d049692, mads32, encoding MADS-transcription factor 32), and corn-belt specific QTNs including S10_4 (Zm00001d023333, sdg127, set domain gene127) and S7_1 (Zm00001d018614, GLR3.4, and glutamate receptor 3.4 or Zm00001d018616, DDRGK domain-containing protein) were reported, and the relationship among GEIs, QEIs and phenotypic plasticity and their biological and breeding implications were discussed

Impact of Ultra-Low Interfacial Tension on Enhanced Oil Recovery of Ultra-Low Permeability Reservoir

Ultra-low permeability reservoirs have the characteristics of complex pore throat structure, generally higher injection pressure and lower oil recovery. By means of casting thin sections, pore structure of selected ultra-low permeability core was surveyed. The core was classified into low porosity, low permeability and without natural fractures. Vast majority of throats of the core varied in width from 2.5 μm to 15 μm. Core displacement experiments showed that surfactant flooding could have certain effect of reducing injection pressure and enhancing oil recovery. When interfacial tension was 5.93×10-2 mN/m, decompression rate reached 7.65%, and recovery was improved by 4.09%. And when interfacial tension was 4.9×10-5 mN/m, decompression rate reached 25%, and recovery was improved by 11.6%. The lower interfacial tension is, the better the effect of reducing injection pressure is, and the higher the extent of enhancing oil recovery is. In general, surfactants have a great application prospect on the oil field development of ultra-low permeability reservoir, and the interfacial tension should be reduced as far as possible.Key words: Low permeability; Surfactant; Interfacial tension; Emulsion; Enhancing oil recover

The asymmetric photosynthetic characteristics of the isobilateral sorghum leaves under the illumination of the diffuse light

The difference between photosynthesis on the two leaf sides (dorsoventral asymmetry) of photosynthesis is important for light-use patterns, but the asymmetry is environment dependent. Its role in photosynthetic regulation has been intensively studied, but little is known about the impacts of direct and diffuse light on the asymmetry. Because of the current changing fraction of diffuse light in sky radiation, this study investigated the dorsoventral asymmetry of photosynthetic traits under direct and diffuse light conditions in an important food and energy crop, Sorghum bicolor L. A unique method was used to investigate the specific gas exchange of each leaf surface. Anatomical and morphological traits were different between the two surfaces of sorghum leaves, which might result in photosynthetic asymmetry. The variations in photosynthetic rates and stomatal conductance were significant between the two surfaces in direct and diffuse light, but the degree of dorsoventral asymmetry decreased in diffuse light. The integrated PN and Gs of the adaxial illumination were significantly higher than that of abaxial illumination both in direct and diffuse light in sorghum leaves, but the ASI of the integrated PNwas 2.83 in direct light, while significantly dropped to 1.69 in diffuse light. Significant morphological differences between the two surfaces might cause photosynthetic asymmetry in the sorghum leaves. The variations of specific gas exchange were significant between direct and diffuse light, including in the incident and self-transmitted light. Compared with direct light, diffuse light reduced the stomatal sensitivity, with the degree of decline being greater in the adaxial surface, which caused weak dorsoventral asymmetry in photosynthesis. The specific photosynthetic characteristics in sorghum leaves varied obviously in direct and diffuse light, including in the incident and self-transmitted light, which contributed to the different overall gas exchange. Compared with direct light, the decline of stomatal sensitivity, which showed positive correlation with stomatal density, caused weakened dorsoventral asymmetry in photosynthesis in diffuse light. The findings provide new insights into dorsoventral asymmetry and the impact of diffuse light on photosynthesis in isobilateral leaves

Long-Term Protection of CHBP Against Combinational Renal Injury Induced by Both Ischemia-Reperfusion and Cyclosporine A in Mice.

Renal ischemia-reperfusion (IR) injury and cyclosporine A (CsA) nephrotoxicity affect allograft function and survival. The prolonged effects and underlying mechanisms of erythropoietin derived cyclic helix B peptide (CHBP) and/or caspase-3 small interfering RNA (CASP-3siRNA) were investigated in mouse kidneys, as well as kidney epithelial cells (TCMK-1), subjected to transplant-related injuries. Bilateral renal pedicles were clamped for 30 min followed by reperfusion for 2 and 8 weeks, with/without 35 mg/kg CsA gavage daily and/or 24 nmol/kg CHBP intraperitoneal injection every 3 days. The ratio of urinary albumin to creatinine was raised by IR injury, further increased by CsA and lowered by CHBP at 2, 4, 6 and 8 weeks, whereas the level of SCr was not significantly affected. Similar change trends were revealed in tubulointerstitial damage and fibrosis, HMGB1 and active CASP-3 protein. Increased apoptotic cells in IR kidneys were decreased by CsA and CHBP at 2 and/or 8 weeks. p70 S6 kinase and mTOR were reduced by CsA with/without CHBP at 2 weeks, so were S6 ribosomal protein and GSK-3β at 8 weeks, with reduced CASP-3 at both time points. CASP-3 was further decreased by CHBP in IR or IR + CsA kidneys at 2 or 8 weeks. Furthermore, in TCMK-1 cells CsA induced apoptosis was decreased by CHBP and/or CASP-3siRNA treatment. Taken together, CHBP predominantly protects kidneys against IR injury at 2 weeks and/or CsA nephrotoxicity at 8 weeks, with different underlying mechanisms. Urinary albumin/creatinine is a good biomarker in monitoring the progression of transplant-related injuries. CsA divergently affects apoptosis in kidneys and cultured kidney epithelial cells, in which CHBP and/or CASP-3siRNA reduces inflammation and apoptosis

How sulphate-reducing microorganisms cope with stress: lessons from systems biology

Sulphate-reducing microorganisms (SRMs) are a phylogenetically diverse group of anaerobes encompassing distinct physiologies with a broad ecological distribution. As SRMs have important roles in the biogeochemical cycling of carbon, nitrogen, sulphur and various metals, an understanding of how these organisms respond to environmental stresses is of fundamental and practical importance. In this Review, we highlight recent applications of systems biology tools in studying the stress responses of SRMs, particularly Desulfovibrio spp., at the cell, population, community and ecosystem levels. The syntrophic lifestyle of SRMs is also discussed, with a focus on system-level analyses of adaptive mechanisms. Such information is important for understanding the microbiology of the global sulphur cycle and for developing biotechnological applications of SRMs for environmental remediation, energy production, biocorrosion control, wastewater treatment and mineral recovery

Preparation of Barite/Titanium Dioxide Composite Powder by Hydrolysis of Titanium Oxysulfate

Barite/titanium dioxide composite pigment powder was prepared by hydrolysis with barite powder (chemical composition BaSO4) as matrix and titanium oxysulfate as titanium source. The results showed that with the increase of calcination temperature of the prepared precursor, the titanium dioxide in the outer layer of the coating was transformed from anatase to rutile, and SO42− in barium sulfate inhibited the transformation of anatase titanium dioxide to rutile titanium dioxide; The composite powder forms a core-shell structure. The barite / titanium dioxide composite powder sample with theoretical titanium dioxide content accounting for 50% of the mass of the composite powder has a blue whiteness of 94.70%, a hiding power of 18.65 g/m2, and an oil absorption value of 39.59 g/100 g, which has good pigment properties

Growth, biochemical composition and photosynthetic performance of Scenedesmus acuminatus under different initial sulfur supplies

The effects of sulfur availability on growth, biochemical composition and photosynthetic capacity of the freshwater green microalga Scenedesmus acuminatus were investigated. Modified BG-11 media with Na2SO4 concentrations of 0.076 mM (0.25S), 0.153 mM (0.5S), 0.306 mM (control group), 0.459 mM (1.5S) and 0.612 mM (2.0S) were used to culture S. acuminatus. Sulfur repletion promoted the growth and reproduction of this species, while low sulfur supply markedly decreased the reproduction, nitrogen uptake, soluble protein and chlorophyll content, and photosynthetic activity. Elemental analysis showed that nitrogen, sulfur and carbon content per cell was significantly higher in the sulfur-limitation groups than in the control group on day 18. The metabolic response to sulfur limitation was divided into two stages: first, carbon equivalents were diverted from soluble protein to carbohydrates; then, carbohydrates were converted into neutral lipids. The total lipid content in the 0.25S and 0.5S groups reached 55.2% dry weight (DW) and 52.5% DW, respectively; neutral lipids accounted for 92.1% and 90.3% of the total lipids. Low-sulfur (0.5S) and sulfur-replete conditions both enhanced the lipid productivity. The initial sulfur level caused significant changes in the fatty acid composition of S. acuminatus. The sulfur-limited groups accumulated C16:0 and C18:1, while the sulfur-replete groups were mainly enriched in C16:0. Levels of free leucine, isoleucine, valine, lysine, glycine, alanine, aspartic acid and proline were closely related to the initial sulfur concentration. Changes in free phenylalanine, tryptophan, threonine and serine were due more to the duration of culturing. The results of this study will be useful as a reference for regulation of the initial sulfur supply to enhance lipid productivity of S. acuminatus for use in applications such as biodiesel production