Preparation and characterisation of tamarind 4-hydroxybenzoic acid (THBA) resin and its use in extraction of heavy metal ions from industrial wastewater

The adsorption of heavy metal cations, Pb(II), Cd(II), Cu(II), Zn(II) and Fe(II) from aqueous solution by newly-synthesized tamarind 4-hydroxybenzoic acid (THBA) resin was investigated. The resin was characterised on the basis of FTIR, elemental analysis, ion-exchange capacity and physico-chemical properties. The distribution coefficients (Kd) and percentage adsorption of metal ions on resin were determined by batch methods using atomic absorption spectrophotometry (AAS). The effect of experimental parameters, such as pH, treatment time, temperature, adsorbent dose, initial metal ion concentration and flow rate, on the removal of metal ions was also studied. THBA resin proved to be an effective adsorbent for the removal of different heavy metal ions from aqueous solution; removal efficiency followed the order: Fe(II) > Cu(II) > Zn(II) > Cd(II) > Pb(II). These results suggest that the cation exchange resin THBA holds great potential to remove cationic heavy metal species from industrial wastewater

Characterisation and applications of synthesised cation exchanger guar gum sulphonic acid (GSA) resin for removal and recovery of toxic metal ions from industrial wastewater

The chemically modified guar gum sulphonic acid (GSA) resin was used for removal and pre-concentration of Zn2+, Cd2+, Fe2+, Pb2+ and Cu2+ ions in aqueous solutions and steel industry effluent from Jodhpur, India. This type of ion exchange resin represents a new class of hybrid ion exchangers with higher stability, reproducibility and selectivity for toxic metal ions. The characterisation of the resin was carried out by determining the ion exchange capacity, elemental analysis, FT-IR spectra and thermal analysis (TGA). The distribution coefficients (Kd) of toxic metal ions were determined for differentpH values. The adsorption of different metal ions on GSA resin follows the order: Cu2+ > Fe2+ > Zn2+ > Cd2+ > Pb2+. The adsorbency of different metal ions on the GSA resin was studied for up to 10 cycles

Synthesizing Imperative Programs from Examples Guided by Static Analysis

We present a novel algorithm that synthesizes imperative programs for introductory programming courses. Given a set of input-output examples and a partial program, our algorithm generates a complete program that is consistent with every example. Our key idea is to combine enumerative program synthesis and static analysis, which aggressively prunes out a large search space while guaranteeing to find, if any, a correct solution. We have implemented our algorithm in a tool, called SIMPL, and evaluated it on 30 problems used in introductory programming courses. The results show that SIMPL is able to solve the benchmark problems in 6.6 seconds on average.Comment: The paper is accepted in Static Analysis Symposium (SAS) '17. The submission version is somewhat different from the version in arxiv. The final version will be uploaded after the camera-ready version is read

Teaching Stand Management Using Virtual Alfalfa Plants

A ‘virtual’ alfalfa plant model was developed at the University of Manitoba in Canada as part of a comprehensive grazing research project. This model shows an alfalfa plant ‘growing’ on a computer screen and the plant’s response to grazing (similar to time-lapse photography). The original model was designed and constructed by Av Singh to show the research potential of visually modeling alfalfa plant growth. The ability to visually ‘grow’ a plant on a computer screen also provides an excellent teaching and extension tool

Long-term biopsy outcomes in prostate cancer patients treated with external beam radiotherapy: a systematic review and meta-analysis

Background: Biopsy after external beam radiotherapy (EBRT) for localised prostate cancer (PCa) is an infrequently used but potentially valuable technique to evaluate local recurrence and predict long-term outcomes. Methods: We performed a meta-analysis of studies until March 2020 where a post-EBRT biopsy was performed on patients with low-to intermediate risk PCa, according to the Preferred Reporting Items for Systematic Review and Meta-analysis (PRISMA) statement. The primary outcome was the aggregate post-EBRT positive biopsy rate (≥2 years after EBRT) and the associated odds ratio (OR) of a positive biopsy on biochemical failure (BCF), distant metastasis-free survival (DMFS) and prostate cancer-specific mortality (PCSM). A sensitivity analysis was performed which examined biopsy rate as a function of post-EBRT biopsy protocol, PCa risk, ADT usage and radiation dose. Results: A total of 22 studies were included, of which 10 were randomised controlled trials and 12 were cohort studies. Nine out of the 22 studies used dosing regimens consistent with the 2020 NCCN radiotherapy guidelines. The weighted-average positive biopsy rate across all 22 studies was 32% (95%-CI: 25–39%, n = 3017). In studies where post-treatment biopsy was part of the study protocol, the rate was 35% (95%-CI: 21–38%, n = 2450). In the subgroup of studies that conformed to the 2020 NCCN radiotherapy guidelines, this rate was 22% (95% CI: 19–41%, n = 832). Patients with positive biopsy had a 10-fold higher odds of developing BCF (OR of 10.3, 95%-CI: 3.7–28.7, p < 0.00001), 3-fold higher odds of developing distant metastasis (OR 3.1, 95%-CI: 2.1–4.7, p < 0.00001) and 5-fold higher odds of dying from their PCa (OR 5.1, 95%-CI: 2.6–10, p < 0.00001). Conclusion: A positive biopsy after EBRT is associated with a poor prognosis compared to a negative biopsy. The post-EBRT positive biopsy rate is an important measure which provides additional insight when comparing EBRT to other treatment modalities for PCa

Relocation of active site carboxylates in major facilitator superfamily multidrug transporter LmrP reveals plasticity in proton interactions

The expression of polyspecific membrane transporters is one important mechanism by which cells can obtain resistance to structurally different antibiotics and cytotoxic agents. These transporters reduce intracellular drug concentrations to subtoxic levels by mediating drug efflux across the cell envelope. The major facilitator superfamily multidrug transporter LmrP from $\textit{Lactococcus}$ lactis catalyses drug efflux in a membrane potential and chemical proton gradient-dependent fashion. To enable the interaction with protons and cationic substrates, LmrP contains catalytic carboxyl residues on the surface of a large interior chamber that is formed by transmembrane helices. These residues co-localise together with polar and aromatic residues, and are predicted to be present in two clusters. To investigate the functional role of the catalytic carboxylates, we generated mutant proteins catalysing membrane potential-independent dye efflux by removing one of the carboxyl residues in Cluster 1. We then relocated this carboxyl residue to six positions on the surface of the interior chamber, and tested for restoration of wildtype energetics. The reinsertion at positions towards Cluster 2 reinstated the membrane potential dependence of dye efflux. Our data uncover a remarkable plasticity in proton interactions in LmrP, which is a consequence of the flexibility in the location of key residues that are responsible for proton/multidrug antiport.A.V.N. is a research associate funded by the Biotechnology and Biological Sciences Research Council (BBSRC). H.S., S.R. and Z.T. received scholarships from the Cambridge Commonwealth, European and International Trust. A.N. is the recipient of a Herchel-Smith Scholarship. K.A. is funded through a programme grant from the Human Frontier Science Program

Sestrin2 Modulates AMPK Subunit Expression and Its Response to Ionizing Radiation in Breast Cancer Cells

Background: The sestrin family of stress-responsive genes (SESN1-3) are suggested to be involved in regulation of metabolism and aging through modulation of the AMPK-mTOR pathway. AMP-activated protein kinase (AMPK) is an effector of the tumour suppressor LKB1, which regulates energy homeostasis, cell polarity, and the cell cycle. SESN1/2 can interact directly with AMPK in response to stress to maintain genomic integrity and suppress tumorigenesis. Ionizing radiation (IR), a widely used cancer therapy, is known to increase sestrin expression, and acutely activate AMPK. However, the regulation of AMPK expression by sestrins in response to IR has not been studied in depth. Methods and Findings: Through immunoprecipitation we observed that SESN2 directly interacted with the AMPKa1b1c1 trimer and its upstream regulator LKB1 in MCF7 breast cancer cells. SESN2 overexpression was achieved using a Flag-tagged SESN2 expression vector or a stably-integrated tetracycline-inducible system, which also increased AMPKa1 and AMPKb1 subunit phosphorylation, and co-localized with phosphorylated AMPKa-Thr127 in the cytoplasm. Furthermore, enhanced SESN2 expression increased protein levels of LKB1 and AMPKa1b1c1, as well as mRNA levels of LKB1, AMPKa1, and AMPKb1. Treatment of MCF7 cells with IR elevated AMPK expression and activity, but this effect was attenuated in the presence of SESN2 siRNA. In addition, elevated SESN2 inhibited IR-induced mTOR signalling and sensitized MCF7 cells to IR through an AMPK-dependent mechanism

A danger of low copy numbers for inferring incorrect cooperativity degree

Background: A dose-response curve depicts fraction of bound proteins as a function of unbound ligands. Dose-response curves are used to measure the cooperativity degree of a ligand binding process. Frequently, the Hill function is used to fit the experimental data. The Hill function is parameterized by the value of the dissociation constant, and the Hill coefficient which describes the cooperativity degree. The use of Hill's model and the Hill function have been heavily criticised in this context, predominantly the assumption that all ligands bind at once, which lead to further refinements of the model. In this work, the validity of the Hill function has been studied from an entirely different point of view. In the limit of low copy numbers the dynamics of the system becomes noisy. The goal was to asses the validity of the Hill function in this limit, and to see in which ways the effects of the fluctuations change the form of the dose-response curves. Results: Dose-response curves were computed taking into account effects of fluctuations. The effects of fluctuations were described at the lowest order (the second moment of the particle number distribution) by using previously developed Pair Approach Reaction Noise EStimator (PARNES) method. The stationary state of the system is described by nine equations with nine unknowns. To obtain fluctuation corrected dose-response curves the equations have been investigated numerically. Conclusions: The Hill function cannot describe dose-response curves in a low particle limit. First, dose-response curves are not solely parameterized by the dissociation constant and the Hill coefficient. In general, the shape of a dose-response curve depends on the variables that describe how an experiment (ensemble) is designed. Second, dose-response curves are multi valued in a rather non-trivial way

Pinwheel VBS state and triplet excitations in the two-dimensional deformed kagome lattice

Determining ground states of correlated electron systems is fundamental to understanding novel phenomena in condensed matter physics. A difficulty, however, arises in a geometrically frustrated system in which the incompatibility between the global topology of an underlying lattice and local spin interactions gives rise to macroscopically degenerate ground states, potentially prompting the emergence of quantum spin states, such as resonating valence bond (RVB) and valence bond solid (VBS). Although theoretically proposed to exist in a kagome lattice -- one of the most highly frustrated lattices in two dimensions (2D) being comprised of corner-sharing triangles -- such quantum-fluctuation-induced states have not been observed experimentally. Here we report the first realization of the "pinwheel" VBS ground state in the S=1/2 deformed kagome lattice antiferromagnet Rb2Cu3SnF12. In this system, a lattice distortion breaks the translational symmetry of the ideal kagome lattice and stabilizes the VBS state.Comment: 10 pages, 4 figures and Supplemental Informatio