4,357 research outputs found
Weak continuous monitoring of a flux qubit using coplanar waveguide resonator
We study a flux qubit in a coplanar waveguide resonator by measuring
transmission through the system. In our system with the flux qubit decoupled
galvanically from the resonator, the intermediate coupling regime is achieved.
In this regime dispersive readout is possible with weak backaction on the
qubit. The detailed theoretical analysis and simulations give a good agreement
with the experimental data and allow to make the qubit characterization.Comment: 4 pages, 3 figures, to be published in Phys. Rev.
Identifying chemokines as therapeutic targets in renal disease: Lessons from antagonist studies and knockout mice
Chemokines, in concert with cytokines and adhesion molecules, play multiple roles in local and systemic immune responses. In the kidney, the temporal and spatial expression of chemokines correlates with local renal damage and accumulation of chemokine receptor-bearing leukocytes. Chemokines play important roles in leukocyte trafficking and blocking chemokines can effectively reduce renal leukocyte recruitment and subsequent renal damage. However, recent data indicate that blocking chemokine or chemokine receptor activity in renal disease may also exacerbate renal inflammation under certain conditions. An increasing amount of data indicates additional roles of chemokines in the regulation of innate and adaptive immune responses, which may adversively affect the outcome of interventional studies. This review summarizes available in vivo studies on the blockade of chemokines and chemokine receptors in kidney diseases, with a special focus on the therapeutic potential of anti-chemokine strategies, including potential side effects, in renal disease. Copyright (C) 2004 S. Karger AG, Basel
Quantum correlation of electron and ion energy in the dissociative strong-field ionization of H2
We report on the strong field ionization of H2 by a corotating two-color laser field. We measure the electron momentum distribution in coincidence with the kinetic energy release (KER) of dissociating hydrogen molecules. In addition to a characteristic half-moon structure, we observe a low-energy structure in the electron momentum distribution at a KER of about 3.5 eV. We speculate that the outgoing electron interacts with the molecular ion, despite the absence of classical recollisions under these conditions. Time-dependent density functional theory simulations support our conclusions
Nanoscale temperature measurements using non-equilibrium Brownian dynamics of a levitated nanosphere
Einstein realised that the fluctuations of a Brownian particle can be used to
ascertain properties of its environment. A large number of experiments have
since exploited the Brownian motion of colloidal particles for studies of
dissipative processes, providing insight into soft matter physics, and leading
to applications from energy harvesting to medical imaging. Here we use
optically levitated nanospheres that are heated to investigate the
non-equilibrium properties of the gas surrounding them. Analysing the sphere's
Brownian motion allows us to determine the temperature of the centre-of-mass
motion of the sphere, its surface temperature and the heated gas temperature in
two spatial dimensions. We observe asymmetric heating of the sphere and gas,
with temperatures reaching the melting point of the material. This method
offers new opportunities for accurate temperature measurements with spatial
resolution on the nanoscale, and a new means for testing non-equilibrium
thermodynamicsComment: 5 pages, 4 figures, supplementary material available upon reques
Density-matrix renormalisation group approach to quantum impurity problems
A dynamic density-matrix renormalisation group approach to the spectral
properties of quantum impurity problems is presented. The method is
demonstrated on the spectral density of the flat-band symmetric single-impurity
Anderson model. We show that this approach provides the impurity spectral
density for all frequencies and coupling strengths. In particular, Hubbard
satellites at high energy can be obtained with a good resolution. The main
difficulties are the necessary discretisation of the host band hybridised with
the impurity and the resolution of sharp spectral features such as the
Abrikosov-Suhl resonance.Comment: 16 pages, 6 figures, submitted to Journal of Physics: Condensed
Matte
A multiwavelength study of the supernova remnant G296.8-0.3
We report XMM-Newton observations of the Galactic supernova remnant
G296.8-0.3, together with complementary radio and infrared data. The spatial
and spectral properties of the X-ray emission, detected towards G296.8-0.3, was
investigated in order to explore the possible evolutionary scenarios and the
physical connexion with its unusual morphology detected at radio frequencies.
G296.8-0.3 displays diffuse X-ray emission correlated with the peculiar radio
morphology detected in the interior of the remnant and with the shell-like
radio structure observed to the northwest side of the object. The X-ray
emission peaks in the soft/medium energy range (0.5-3.0 keV). The X-ray
spectral analysis confirms that the column density is high (NH \sim 0.64 x
10^{22} cm^{-2}) which supports a distant location (d>9 kpc) for the SNR. Its
X-ray spectrum can be well represented by a thermal (PSHOCK) model, with kT
\sim 0.86 keV, an ionization timescale of 6.1 x 10^{10} cm^{-3} s, and low
abundance (0.12 Z_sun). The 24 microns observations show shell-like emission
correlated with part of the northwest and southeast boundaries of the SNR. In
addition a point-like X-ray source is also detected close to the geometrical
center of the radio SNR. The object presents some characteristics of the
so-called compact central objects (CCO). Its X-ray spectrum is consistent with
those found at other CCOs and the value of NH is consistent with that of
G296.8-0.3, which suggests a physical connexion with the SNR.Comment: Accepted for publication in Astrophysics & Space Scienc
Modeling the actinides with disordered local moments
A first-principles disordered local moment (DLM) picture within the
local-spin-density and coherent potential approximations (LSDA+CPA) of the
actinides is presented. The parameter free theory gives an accurate description
of bond lengths and bulk modulus. The case of -Pu is studied in
particular and the calculated density of states is compared to data from
photo-electron spectroscopy. The relation between the DLM description, the
dynamical mean field approach and spin-polarized magnetically ordered modeling
is discussed.Comment: 6 pages, 4 figure
Unravelling the nature of HD 81032 - a new RS CVn Binary
BVR photometric and quasi-simultaneous optical spectroscopic observations of
the star HD 81032 have been carried out during the years 2000 - 2004. A
photometric period of d has been detected for this star. A
large group of spots with a migration period of years is
inferred from the first three years of the data. H and Ca II H and K
emissions from the star indicate high chromospheric activity. The available
photometry in the BVRIJHK bands is consistent with spectral type of K0 IV
previously found for this star. We have also examined the spectral energy
distribution of HD 81032 for the presence of an infrared colour excess using
the 2MASS JHK and IRAS photometry, but found no significant excess in any band
abovethe normal values expected for a star with this spectral type. We have
also analyzed the X-ray emission properties of this star using data obtained by
the ROSAT X-ray observatory during its All-Sky Survey phase. An X-ray flare of
about 12 hours duration was detected during the two days of X-ray coverage
obtained for this star. Its X-ray spectrum, while only containing 345 counts,
is inconsistent with a single-temperature component solar-abundance coronal
plasma model, but implies either the presence of two or more plasma components,
non-solar abundances, or a combination of both of these properties. All of the
above properties of HD 81032 suggest that it is a newly identified, evolved RS
CVn binary.Comment: 18 pages, 10 figures, 3 tables, Accepted for the publication in JAp
SCOWLP classification: Structural comparison and analysis of protein binding regions
<p>Abstract</p> <p>Background</p> <p>Detailed information about protein interactions is critical for our understanding of the principles governing protein recognition mechanisms. The structures of many proteins have been experimentally determined in complex with different ligands bound either in the same or different binding regions. Thus, the structural interactome requires the development of tools to classify protein binding regions. A proper classification may provide a general view of the regions that a protein uses to bind others and also facilitate a detailed comparative analysis of the interacting information for specific protein binding regions at atomic level. Such classification might be of potential use for deciphering protein interaction networks, understanding protein function, rational engineering and design.</p> <p>Description</p> <p>Protein binding regions (PBRs) might be ideally described as well-defined separated regions that share no interacting residues one another. However, PBRs are often irregular, discontinuous and can share a wide range of interacting residues among them. The criteria to define an individual binding region can be often arbitrary and may differ from other binding regions within a protein family. Therefore, the rational behind protein interface classification should aim to fulfil the requirements of the analysis to be performed.</p> <p>We extract detailed interaction information of protein domains, peptides and interfacial solvent from the SCOWLP database and we classify the PBRs of each domain family. For this purpose, we define a similarity index based on the overlapping of interacting residues mapped in pair-wise structural alignments. We perform our classification with agglomerative hierarchical clustering using the complete-linkage method. Our classification is calculated at different similarity cut-offs to allow flexibility in the analysis of PBRs, feature especially interesting for those protein families with conflictive binding regions.</p> <p>The hierarchical classification of PBRs is implemented into the SCOWLP database and extends the SCOP classification with three additional family sub-levels: Binding Region, Interface and Contacting Domains. SCOWLP contains 9,334 binding regions distributed within 2,561 families. In 65% of the cases we observe families containing more than one binding region. Besides, 22% of the regions are forming complex with more than one different protein family.</p> <p>Conclusion</p> <p>The current SCOWLP classification and its web application represent a framework for the study of protein interfaces and comparative analysis of protein family binding regions. This comparison can be performed at atomic level and allows the user to study interactome conservation and variability. The new SCOWLP classification may be of great utility for reconstruction of protein complexes, understanding protein networks and ligand design. SCOWLP will be updated with every SCOP release. The web application is available at <url>http://www.scowlp.org</url>.</p
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