2,003 research outputs found
VISTA checkpoint inhibition by pH-selective antibody SNS-101 with optimized safety and pharmacokinetic profiles enhances PD-1 response
VISTA, an inhibitory myeloid-T-cell checkpoint, holds promise as a target for cancer immunotherapy. However, its effective targeting has been impeded by issues such as rapid clearance and cytokine release syndrome observed with previous VISTA antibodies. Here we demonstrate that SNS-101, a newly developed pH-selective VISTA antibody, addresses these challenges. Structural and biochemical analyses confirmed the pH-selectivity and unique epitope targeted by SNS-101. These properties confer favorable pharmacokinetic and safety profiles on SNS-101. In syngeneic tumor models utilizing human VISTA knock-in mice, SNS-101 shows in vivo efficacy when combined with a PD-1 inhibitor, modulates cytokine and chemokine signaling, and alters the tumor microenvironment. In summary, SNS-101, currently in Phase I clinical trials, emerges as a promising therapeutic biologic for a wide range of patients whose cancer is refractory to current immunotherapy regimens
IL2 targeted to CD8+ T Cells promotes robust effector T-cell responses and potent antitumor immunity
IL2 signals pleiotropically on diverse cell types, some of which contribute to therapeutic activity against tumors, whereas others drive undesired activity, such as immunosuppression or toxicity. We explored the theory that targeting of IL2 to CD8+ T cells, which are key antitumor effectors, could enhance its therapeutic index. To this aim, we developed AB248, a CD8 cis-targeted IL2 that demonstrates over 500-fold preference for CD8+ T cells over natural killer and regulatory T cells (Tregs), which may contribute to toxicity and immunosuppression, respectively. AB248 recapitulated IL2\u27s effects on CD8+ T cells in vitro and induced selective expansion of CD8+T cells in primates. In mice, an AB248 surrogate demonstrated superior antitumor activity and enhanced tolerability as compared with an untargeted IL2Rβγ agonist. Efficacy was associated with the expansion and phenotypic enhancement of tumor-infiltrating CD8+ T cells, including the emergence of a better effector population. These data support the potential utility of AB248 in clinical settings. Significance: The full potential of IL2 therapy remains to be unlocked. We demonstrate that toxicity can be decoupled from antitumor activity in preclinical models by limiting IL2 signaling to CD8+ T cells, supporting the development of CD8+ T cell-selective IL2 for the treatment of cancer. See related article by Kaptein et al. p. 1226
Genome-wide analyses of individual differences in quantitatively assessed reading- and language-related skills in up to 34,000 people
The use of spoken and written language is a fundamental human capacity. Individual differences in reading- and language-related skills are influenced by genetic variation, with twin-based heritability estimates of 30 to 80% depending on the trait. The genetic architecture is complex, heterogeneous, and multifactorial, but investigations of contributions of single-nucleotide polymorphisms (SNPs) were thus far underpowered. We present a multicohort genome-wide association study (GWAS) of five traits assessed individually using psychometric measures (word reading, nonword reading, spelling, phoneme awareness, and nonword repetition) in samples of 13,633 to 33,959 participants aged 5 to 26 y. We identified genome-wide significant association with word reading (rs11208009, P = 1.098 Ă— 10-8) at a locus that has not been associated with intelligence or educational attainment. All five reading-/language-related traits showed robust SNP heritability, accounting for 13 to 26% of trait variability. Genomic structural equation modeling revealed a shared genetic factor explaining most of the variation in word/nonword reading, spelling, and phoneme awareness, which only partially overlapped with genetic variation contributing to nonword repetition, intelligence, and educational attainment. A multivariate GWAS of word/nonword reading, spelling, and phoneme awareness maximized power for follow-up investigation. Genetic correlation analysis with neuroimaging traits identified an association with the surface area of the banks of the left superior temporal sulcus, a brain region linked to the processing of spoken and written language. Heritability was enriched for genomic elements regulating gene expression in the fetal brain and in chromosomal regions that are depleted of Neanderthal variants. Together, these results provide avenues for deciphering the biological underpinnings of uniquely human traits.
Keywords: genome-wide association study; language; meta-analysis; readin
Evolution of COVID-19 mortality over time: results from the Swiss hospital surveillance system (CH-SUR)
BACKGROUND
When the periods of time during and after the first wave of the ongoing SARS-CoV-2/COVID-19 pandemic in Europe are compared, the associated COVID-19 mortality seems to have decreased substantially. Various factors could explain this trend, including changes in demographic characteristics of infected persons and the improvement of case management. To date, no study has been performed to investigate the evolution of COVID-19 in-hospital mortality in Switzerland, while also accounting for risk factors.
METHODS
We investigated the trends in COVID-19-related mortality (in-hospital and in-intermediate/intensive-care) over time in Switzerland, from February 2020 to June 2021, comparing in particular the first and the second wave. We used data from the COVID-19 Hospital-based Surveillance (CH-SUR) database. We performed survival analyses adjusting for well-known risk factors of COVID-19 mortality (age, sex and comorbidities) and accounting for competing risk.
RESULTS
Our analysis included 16,984 patients recorded in CH-SUR, with 2201 reported deaths due to COVID-19 (13.0%). We found that overall in-hospital mortality was lower during the second wave of COVID-19 than in the first wave (hazard ratio [HR] 0.70, 95% confidence interval [CI] 0.63- 0.78; p <0.001), a decrease apparently not explained by changes in demographic characteristics of patients. In contrast, mortality in intermediate and intensive care significantly increased in the second wave compared with the first wave (HR 1.25, 95% CI 1.05-1.49; p = 0.029), with significant changes in the course of hospitalisation between the first and the second wave.
CONCLUSION
We found that, in Switzerland, COVID-19 mortality decreased among hospitalised persons, whereas it increased among patients admitted to intermediate or intensive care, when comparing the second wave to the first wave. We put our findings in perspective with changes over time in case management, treatment strategy, hospital burden and non-pharmaceutical interventions. Further analyses of the potential effect of virus variants and of vaccination on mortality would be crucial to have a complete overview of COVID-19 mortality trends throughout the different phases of the pandemic
European Association of Cardiothoracic Anesthesiology and Intensive Care (EACTAIC) Fellowship Curriculum: Second Edition
This document represents the first update of the Cardiothoracic and Vascular Anaesthesia Fellowship Curriculum of the European Association of Cardiothoracic Anaesthesiology and Intensive Care. After obtaining feedback from exit interviews with fellows in training, graduate fellows, and program directors, 2 modified online Delphi procedures with questionnaires were conducted. A consensus was reached when two-thirds of responding committee members gave green or yellow ratings on a traffic light system, and >70% indicated strong agreement or agreement on a 5-point Likert scale. The new regulations include the following: (1) more flexibility in the fellows` rotation, as long as the total number of days, rotations, and cases are completed during the training year; (2) recommendation for strict compliance with national working-time guidelines; (3) no extension of fellowship training to compensate for annual and/or sick leave, unless the required minimum number of cases and rotations are not reached; (4) interruption of fellowship training for >12 months is allowed for personal or medical reasons; (5) introduction of a checklist for quantitative assessment of standard clinical skills; (6) recommendations for a uniform structure of exit interviews; (7) possibility of a 1-month training rotation in a postanesthesia care unit instead of an intensive care unit; and (8) provided all other requirements have been met, the allowance of progression from the basic training year to the advanced fellowship training year without first passing the transesophageal echocardiography examination
Observations of gas flows inside a protoplanetary gap
Gaseous giant planet formation is thought to occur in the first few million
years following stellar birth. Models predict that giant planet formation
carves a deep gap in the dust component (shallower in the gas). Infrared
observations of the disk around the young star HD142527, at ~140pc, found an
inner disk ~10AU in radius, surrounded by a particularly large gap, with a
disrupted outer disk beyond 140AU, indicative of a perturbing planetary-mass
body at ~90 AU. From radio observations, the bulk mass is molecular and lies in
the outer disk, whose continuum emission has a horseshoe morphology. The
vigorous stellar accretion rate would deplete the inner disk in less than a
year, so in order to sustain the observed accretion, matter must flow from the
outer-disk into the cavity and cross the gap. In dynamical models, the putative
protoplanets channel outer-disk material into gap-crossing bridges that feed
stellar accretion through the inner disk. Here we report observations with the
Atacama Large Millimetre Array (ALMA) that reveal diffuse CO gas inside the
gap, with denser HCO+ gas along gap-crossing filaments, and that confirm the
horseshoe morphology of the outer disk. The estimated flow rate of the gas is
in the range 7E-9 to 2E-7 Msun/yr, which is sufficient to maintain accretion
onto the star at the present rate
RETROSPECTIVE: Corona: System Implications of Emerging Nanophotonic Technology
The 2008 Corona effort was inspired by a pressing need for more of
everything, as demanded by the salient problems of the day. Dennard scaling was
no longer in effect. A lot of computer architecture research was in the
doldrums. Papers often showed incremental subsystem performance improvements,
but at incommensurate cost and complexity. The many-core era was moving
rapidly, and the approach with many simpler cores was at odds with the better
and more complex subsystem publications of the day. Core counts were doubling
every 18 months, while per-pin bandwidth was expected to double, at best, over
the next decade. Memory bandwidth and capacity had to increase to keep pace
with ever more powerful multi-core processors. With increasing core counts per
die, inter-core communication bandwidth and latency became more important. At
the same time, the area and power of electrical networks-on-chip were
increasingly problematic: To be reliably received, any signal that traverses a
wire spanning a full reticle-sized die would need significant equalization,
re-timing, and multiple clock cycles. This additional time, area, and power was
the crux of the concern, and things looked to get worse in the future.
Silicon nanophotonics was of particular interest and seemed to be improving
rapidly. This led us to consider taking advantage of 3D packaging, where one
die in the 3D stack would be a photonic network layer. Our focus was on a
system that could be built about a decade out. Thus, we tried to predict how
the technologies and the system performance requirements would converge in
about 2018. Corona was the result this exercise; now, 15 years later, it's
interesting to look back at the effort.Comment: 2 pages. Proceedings of ISCA-50: 50 years of the International
Symposia on Computer Architecture (selected papers) June 17-21 Orlando,
Florid
Many-body localization in a quantum simulator with programmable random disorder
When a system thermalizes it loses all local memory of its initial
conditions. This is a general feature of open systems and is well described by
equilibrium statistical mechanics. Even within a closed (or reversible) quantum
system, where unitary time evolution retains all information about its initial
state, subsystems can still thermalize using the rest of the system as an
effective heat bath. Exceptions to quantum thermalization have been predicted
and observed, but typically require inherent symmetries or noninteracting
particles in the presence of static disorder. The prediction of many-body
localization (MBL), in which disordered quantum systems can fail to thermalize
in spite of strong interactions and high excitation energy, was therefore
surprising and has attracted considerable theoretical attention. Here we
experimentally generate MBL states by applying an Ising Hamiltonian with
long-range interactions and programmably random disorder to ten spins
initialized far from equilibrium. We observe the essential signatures of MBL:
memory retention of the initial state, a Poissonian distribution of energy
level spacings, and entanglement growth in the system at long times. Our
platform can be scaled to higher numbers of spins, where detailed modeling of
MBL becomes impossible due to the complexity of representing such entangled
quantum states. Moreover, the high degree of control in our experiment may
guide the use of MBL states as potential quantum memories in naturally
disordered quantum systems.Comment: 9 pages, 9 figure
Statistical-Mechanical Measure of Stochastic Spiking Coherence in A Population of Inhibitory Subthreshold Neurons
By varying the noise intensity, we study stochastic spiking coherence (i.e.,
collective coherence between noise-induced neural spikings) in an inhibitory
population of subthreshold neurons (which cannot fire spontaneously without
noise). This stochastic spiking coherence may be well visualized in the raster
plot of neural spikes. For a coherent case, partially-occupied "stripes"
(composed of spikes and indicating collective coherence) are formed in the
raster plot. This partial occupation occurs due to "stochastic spike skipping"
which is well shown in the multi-peaked interspike interval histogram. The main
purpose of our work is to quantitatively measure the degree of stochastic
spiking coherence seen in the raster plot. We introduce a new spike-based
coherence measure by considering the occupation pattern and the pacing
pattern of spikes in the stripes. In particular, the pacing degree between
spikes is determined in a statistical-mechanical way by quantifying the average
contribution of (microscopic) individual spikes to the (macroscopic)
ensemble-averaged global potential. This "statistical-mechanical" measure
is in contrast to the conventional measures such as the "thermodynamic" order
parameter (which concerns the time-averaged fluctuations of the macroscopic
global potential), the "microscopic" correlation-based measure (based on the
cross-correlation between the microscopic individual potentials), and the
measures of precise spike timing (based on the peri-stimulus time histogram).
In terms of , we quantitatively characterize the stochastic spiking
coherence, and find that reflects the degree of collective spiking
coherence seen in the raster plot very well. Hence, the
"statistical-mechanical" spike-based measure may be used usefully to
quantify the degree of stochastic spiking coherence in a statistical-mechanical
way.Comment: 16 pages, 5 figures, to appear in the J. Comput. Neurosc
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